##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934830.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1067476 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08154188009848 33.0 31.0 34.0 30.0 34.0 2 32.267191955603685 34.0 31.0 34.0 30.0 34.0 3 32.26146348957728 34.0 31.0 34.0 30.0 34.0 4 35.85261120624726 37.0 35.0 37.0 35.0 37.0 5 35.73331203699193 37.0 35.0 37.0 35.0 37.0 6 35.664889889796115 37.0 35.0 37.0 33.0 37.0 7 36.03106580382135 37.0 35.0 37.0 35.0 37.0 8 35.914896447320594 37.0 35.0 37.0 35.0 37.0 9 37.653682143673485 39.0 38.0 39.0 35.0 39.0 10 37.187575177334196 39.0 37.0 39.0 34.0 39.0 11 37.10897481535885 39.0 37.0 39.0 34.0 39.0 12 37.06749378908753 39.0 37.0 39.0 33.0 39.0 13 37.03929924419847 39.0 37.0 39.0 33.0 39.0 14 38.154092457347986 40.0 37.0 41.0 33.0 41.0 15 38.209657172620275 40.0 37.0 41.0 33.0 41.0 16 38.29993086495622 40.0 37.0 41.0 34.0 41.0 17 38.3005407147327 40.0 37.0 41.0 34.0 41.0 18 38.280509351029906 40.0 37.0 41.0 34.0 41.0 19 38.23179818562666 40.0 37.0 41.0 34.0 41.0 20 38.1795440834267 40.0 37.0 41.0 34.0 41.0 21 38.131314427678 40.0 37.0 41.0 34.0 41.0 22 38.083193439477796 40.0 37.0 41.0 34.0 41.0 23 37.87677381037138 40.0 36.0 41.0 33.0 41.0 24 37.60671902693831 39.0 36.0 41.0 33.0 41.0 25 37.56768489408661 39.0 36.0 41.0 33.0 41.0 26 37.77326703363823 39.0 36.0 41.0 33.0 41.0 27 37.891853306303844 40.0 37.0 41.0 34.0 41.0 28 37.8603696944943 40.0 36.0 41.0 34.0 41.0 29 37.892548403898545 40.0 37.0 41.0 34.0 41.0 30 37.75772007988938 40.0 36.0 41.0 33.0 41.0 31 37.666860894296455 40.0 36.0 41.0 33.0 41.0 32 37.61220111740217 40.0 36.0 41.0 33.0 41.0 33 37.535153951938966 40.0 36.0 41.0 33.0 41.0 34 37.49109581854768 40.0 36.0 41.0 33.0 41.0 35 37.45950260240043 40.0 36.0 41.0 33.0 41.0 36 37.36506019807471 40.0 36.0 41.0 33.0 41.0 37 37.261092521049655 40.0 36.0 41.0 32.0 41.0 38 37.19283337517658 40.0 36.0 41.0 32.0 41.0 39 37.2294149938734 40.0 36.0 41.0 32.0 41.0 40 37.1855067467559 40.0 36.0 41.0 32.0 41.0 41 37.13282921583249 39.0 36.0 41.0 32.0 41.0 42 37.02686805136602 39.0 35.0 41.0 32.0 41.0 43 36.950673364085 39.0 35.0 41.0 31.0 41.0 44 36.88570984265689 39.0 35.0 41.0 31.0 41.0 45 36.855676380546264 39.0 35.0 41.0 31.0 41.0 46 36.78303306116484 39.0 35.0 41.0 31.0 41.0 47 36.660470118297745 39.0 35.0 41.0 31.0 41.0 48 36.637074744537586 39.0 35.0 41.0 31.0 41.0 49 36.64474798496641 39.0 35.0 41.0 31.0 41.0 50 36.53796806672937 39.0 35.0 41.0 31.0 41.0 51 35.54927511250838 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 10.0 10 13.0 11 12.0 12 10.0 13 12.0 14 21.0 15 24.0 16 42.0 17 81.0 18 164.0 19 336.0 20 572.0 21 1005.0 22 1690.0 23 2531.0 24 3715.0 25 5618.0 26 7418.0 27 8574.0 28 9613.0 29 10987.0 30 13797.0 31 18148.0 32 24539.0 33 34460.0 34 59908.0 35 82049.0 36 82175.0 37 129616.0 38 245106.0 39 325072.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.65850286095425 22.41399338252101 27.02430780645185 10.903195950072881 2 32.553050373029464 23.635566513907573 26.382419838947197 17.428963274115763 3 29.983250208903993 23.413172755172013 29.14969516879068 17.453881867133312 4 27.36895255724719 26.331177469095323 27.948263005444616 18.35160696821287 5 24.548561279129462 28.3404966481682 27.819829204591016 19.29111286811132 6 24.167007033413398 33.785209222502424 26.74711187886191 15.300671865222263 7 79.17929770786417 5.3406352929714584 10.10842398330267 5.371643015861715 8 80.35880900366847 3.3360000599545097 9.594220385282668 6.710970551094357 9 75.3052059250044 5.0647508702771775 12.353064612225474 7.276978592492946 10 37.38463440864244 20.89114884081703 23.75828590057294 17.965930849967588 11 27.077330075804984 25.645354087586043 25.44469383855 21.832621998058972 12 23.154525253963556 22.863839561732537 32.351172298018874 21.63046288628503 13 22.09117582034631 25.978101615399318 34.11168026260075 17.81904230165362 14 19.838572483128427 28.699286916052447 30.687715695715877 20.774424905103253 15 18.227669755572958 27.45345094409617 34.99956907696286 19.31931022336802 16 19.602688959751788 26.365557633145855 31.789473486991742 22.242279920110615 17 20.10302807744624 26.635727641651897 28.02517339968299 25.236070881218875 18 20.65545267528263 26.004987465760355 32.74565423484931 20.59390562410771 19 20.4659402178597 29.152599215345358 28.636241002139627 21.74521956465532 20 20.51615211957927 28.668185514241067 29.914302522960707 20.90135984321896 21 19.841382850761985 28.66940334021561 31.33840948180568 20.150804327216722 22 19.253922336427237 26.347009206764366 28.144614024109206 26.254454432699188 23 18.27263563770989 27.968310294564 29.008333676822712 24.750720390903403 24 20.356991632598763 25.73790886165122 30.551225507646073 23.35387399810394 25 18.398540107693286 28.151546264271982 28.710153670902205 24.739759957132527 26 17.562268378867536 28.73488490607751 31.561646350831307 22.141200364223646 27 20.001386448032555 27.381224495913724 30.81521270735829 21.802176348695426 28 17.035137089733166 27.39846141739955 31.88736795956068 23.679033533306605 29 19.28783410587217 24.335254375742405 32.5375933510449 23.839318167340533 30 20.235583750829058 26.202181594715015 30.657644762036806 22.90458989241913 31 18.257459652488674 29.19934499698354 28.821631587033337 23.721563763494448 32 19.358561691316716 27.081264590491966 28.638770333009827 24.921403385181492 33 19.07677549659196 25.478792965837172 28.588652110211378 26.85577942735949 34 17.008344918293243 25.563853426212862 31.157890200810133 26.269911454683758 35 18.166591099003632 22.56219343573064 31.148522308698272 28.12269315656745 36 18.55835634712162 24.828848611116317 30.607339181396114 26.005455860365945 37 18.027665258984747 26.412771809389625 32.224331038824296 23.335231892801335 38 18.938880124705378 27.09231870318396 26.605750386893945 27.363050785216718 39 20.20476338578104 23.548538796188392 29.003181336161187 27.243516481869385 40 19.469852249605612 21.756273677347313 33.08702022340549 25.686853849641583 41 16.693490064413627 23.340665270226214 30.3740786678108 29.59176599754936 42 18.729976130610897 23.307502932150232 30.697270945669974 27.265249991568897 43 19.99445420786978 24.096841521495566 30.83413584942425 25.074568421210408 44 19.785081819169704 24.639804548298976 28.74565798200615 26.829455650525162 45 20.547534558154002 22.397505892404137 29.530031588532204 27.52492796090966 46 21.500998617299125 23.054007771603295 30.235433864555265 25.20955974654231 47 17.150924236235756 23.551630200585304 33.15418800984753 26.143257553331413 48 18.0949267243479 21.796180897743834 31.476492211534495 28.632400166373763 49 20.195582851511414 20.353619191438497 32.515672483503145 26.935125473546943 50 19.360341590817967 20.152677905639095 31.839216994105723 28.647763509437212 51 18.385237700894447 19.723534767994785 28.851234126106817 33.039993405003955 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 331.0 1 427.5 2 524.0 3 2573.5 4 4623.0 5 3327.5 6 2032.0 7 2051.5 8 2071.0 9 2225.0 10 2379.0 11 2392.0 12 2405.0 13 2496.5 14 2588.0 15 2532.0 16 2476.0 17 2365.5 18 2255.0 19 2346.5 20 2438.0 21 2648.5 22 2859.0 23 3073.5 24 3288.0 25 3708.0 26 4834.0 27 5540.0 28 6936.5 29 8333.0 30 10647.5 31 12962.0 32 15177.0 33 17392.0 34 20738.5 35 24085.0 36 27193.5 37 30302.0 38 34663.5 39 39025.0 40 44938.0 41 50851.0 42 58080.0 43 65309.0 44 76534.0 45 87759.0 46 105861.5 47 123964.0 48 141225.5 49 158487.0 50 153954.0 51 149421.0 52 121138.5 53 92856.0 54 75137.5 55 57419.0 56 46791.0 57 36163.0 58 30586.5 59 25010.0 60 21327.5 61 17645.0 62 15397.0 63 13149.0 64 10059.0 65 6969.0 66 5601.0 67 4233.0 68 3396.5 69 2560.0 70 2170.0 71 1780.0 72 1374.5 73 969.0 74 717.0 75 304.0 76 143.0 77 131.0 78 119.0 79 97.5 80 76.0 81 57.5 82 39.0 83 31.0 84 23.0 85 23.0 86 23.0 87 12.5 88 2.0 89 1.5 90 1.0 91 1.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1067476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.06306402846979 #Duplication Level Percentage of deduplicated Percentage of total 1 69.42832024812701 23.64941318001056 2 13.126913929025697 8.942858193212286 3 5.409854603157611 5.528286711962093 4 2.7843123505264087 3.793688394849612 5 1.6546406885102882 2.818106585841864 6 1.1309435476080902 2.3114041484855488 7 0.7585776912244256 1.808763632672248 8 0.5971441551389561 1.6272447672579806 9 0.46130083314639153 1.4141987834266796 >10 4.117855365605518 29.55947853680197 >50 0.45736820602882666 10.28612467946501 >100 0.065574549471753 4.4246459536937985 >500 0.0041502879398892184 0.956896720984519 >1k 0.002490172763933531 1.7965493248701763 >5k 5.533717253185625E-4 1.0823403864656962 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGC 6366 0.5963600118410156 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGC 5118 0.4794487182850013 TruSeq Adapter, Index 20 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGCT 4185 0.39204628488134624 TruSeq Adapter, Index 22 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGC 2958 0.27710224866882255 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2556 0.2394433223791448 No Hit CGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTG 2335 0.21874028081193395 No Hit ACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGC 1980 0.1854842638148305 TruSeq Adapter, Index 22 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTG 1467 0.13742697728098804 No Hit GCCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTG 1334 0.12496768077221408 TruSeq Adapter, Index 20 (95% over 21bp) GGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTG 1155 0.10819915389198445 TruSeq Adapter, Index 20 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTG 1092 0.10229738186151258 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.810367633558038E-4 0.0 0.0 0.4119998950796083 0.0 2 2.810367633558038E-4 0.0 0.0 2.046322352914726 0.0 3 2.810367633558038E-4 0.0 0.0 3.059085169127924 0.0 4 2.810367633558038E-4 0.0 0.0 4.100232698440059 0.0 5 2.810367633558038E-4 0.0 0.0 6.726708609842282 0.0 6 2.810367633558038E-4 0.0 0.0 8.257515859841345 0.0 7 2.810367633558038E-4 0.0 0.0 9.741764686044464 0.0 8 2.810367633558038E-4 0.0 0.0 12.182662654710738 0.0 9 2.810367633558038E-4 0.0 0.0 12.992516927781047 0.0 10 2.810367633558038E-4 0.0 0.0 15.05036178799336 0.0 11 2.810367633558038E-4 0.0 0.0 18.024480175666714 0.0 12 2.810367633558038E-4 0.0 0.0 20.102278646077288 0.0 13 2.810367633558038E-4 0.0 0.0 20.925529004867556 0.0 14 2.810367633558038E-4 0.0 0.0 21.221460716681218 0.0 15 2.810367633558038E-4 0.0 0.0 21.782222738497165 0.0 16 2.810367633558038E-4 0.0 0.0 23.147780371643016 0.0 17 2.810367633558038E-4 0.0 0.0 24.917468870494513 0.0 18 2.810367633558038E-4 0.0 0.0 26.750859035706657 0.0 19 2.810367633558038E-4 0.0 0.0 27.852335790219172 0.0 20 2.810367633558038E-4 0.0 0.0 28.835308709516653 0.0 21 2.810367633558038E-4 0.0 0.0 30.15899186492249 0.0 22 2.810367633558038E-4 0.0 0.0 31.50450220894896 0.0 23 2.810367633558038E-4 0.0 0.0 32.9536214397326 0.0 24 2.810367633558038E-4 0.0 0.0 34.00432421899883 0.0 25 2.810367633558038E-4 0.0 0.0 34.945891055161894 0.0 26 2.810367633558038E-4 0.0 0.0 35.808954955427566 0.0 27 2.810367633558038E-4 0.0 0.0 36.646444510227866 0.0 28 2.810367633558038E-4 0.0 0.0 37.54538743728196 0.0 29 2.810367633558038E-4 0.0 0.0 38.42765551637695 0.0 30 2.810367633558038E-4 0.0 0.0 39.37343790399035 0.0 31 2.810367633558038E-4 0.0 0.0 40.318096144550324 0.0 32 2.810367633558038E-4 0.0 0.0 41.179848539920336 0.0 33 2.810367633558038E-4 0.0 0.0 42.00722077123982 0.0 34 2.810367633558038E-4 0.0 0.0 42.77744886067696 0.0 35 2.810367633558038E-4 0.0 0.0 43.57971514113666 0.0 36 2.810367633558038E-4 0.0 0.0 44.36680543637515 0.0 37 2.810367633558038E-4 0.0 0.0 45.147712922819814 0.0 38 2.810367633558038E-4 0.0 0.0 45.930962382292435 0.0 39 2.810367633558038E-4 0.0 0.0 46.68891853306304 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGTACG 25 3.8906175E-5 45.000004 1 CTCGGTG 25 3.8906175E-5 45.000004 14 TTGACGT 50 2.1827873E-11 45.000004 1 CATGTCG 25 3.8906175E-5 45.000004 18 ACGGTAC 25 3.8906175E-5 45.000004 42 TATTTCG 20 7.0330605E-4 45.0 19 TTTAGCG 80 0.0 45.0 1 TCGCAAA 20 7.0330605E-4 45.0 31 TCACCGC 20 7.0330605E-4 45.0 1 ATCTACG 20 7.0330605E-4 45.0 38 GGCGTCG 20 7.0330605E-4 45.0 13 ATTACCG 20 7.0330605E-4 45.0 1 GCGTTAA 20 7.0330605E-4 45.0 9 TCTAGCG 20 7.0330605E-4 45.0 1 CGTTAAT 20 7.0330605E-4 45.0 36 TCTACGC 20 7.0330605E-4 45.0 39 GTTAACG 20 7.0330605E-4 45.0 1 AGACCGT 20 7.0330605E-4 45.0 26 TATTACG 20 7.0330605E-4 45.0 1 GACATCG 20 7.0330605E-4 45.0 27 >>END_MODULE