##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934829.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1116150 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26305604085472 33.0 31.0 34.0 30.0 34.0 2 32.43819110334633 34.0 31.0 34.0 31.0 34.0 3 32.42990010303274 34.0 31.0 34.0 30.0 34.0 4 35.97209962818618 37.0 35.0 37.0 35.0 37.0 5 35.86931774403082 37.0 35.0 37.0 35.0 37.0 6 35.792466962325854 37.0 35.0 37.0 35.0 37.0 7 36.07707655781033 37.0 35.0 37.0 35.0 37.0 8 35.86924786095059 37.0 35.0 37.0 35.0 37.0 9 37.502809658200064 39.0 38.0 39.0 35.0 39.0 10 37.32119159611163 39.0 37.0 39.0 34.0 39.0 11 37.2387716704744 39.0 37.0 39.0 34.0 39.0 12 37.09945616628589 39.0 37.0 39.0 34.0 39.0 13 37.029036419836046 39.0 37.0 39.0 33.0 39.0 14 38.176478071943734 40.0 37.0 41.0 33.0 41.0 15 38.23383505801191 40.0 37.0 41.0 33.0 41.0 16 38.312527886036825 40.0 37.0 41.0 34.0 41.0 17 38.30582448595619 40.0 37.0 41.0 34.0 41.0 18 38.266639788558884 40.0 37.0 41.0 34.0 41.0 19 38.218388209470056 40.0 37.0 41.0 34.0 41.0 20 38.17870895488958 40.0 37.0 41.0 34.0 41.0 21 38.07089817676835 40.0 36.0 41.0 34.0 41.0 22 38.02313219549344 40.0 36.0 41.0 34.0 41.0 23 37.8518666845854 40.0 36.0 41.0 33.0 41.0 24 37.59415938717914 39.0 35.0 41.0 33.0 41.0 25 37.52739327151369 39.0 35.0 41.0 33.0 41.0 26 37.68520001791874 39.0 36.0 41.0 33.0 41.0 27 37.75036151054966 40.0 36.0 41.0 33.0 41.0 28 37.67646284101599 40.0 36.0 41.0 33.0 41.0 29 37.66887963087399 40.0 36.0 41.0 33.0 41.0 30 37.52465349639385 40.0 36.0 41.0 33.0 41.0 31 37.431148143170724 40.0 35.0 41.0 33.0 41.0 32 37.298856784482375 39.0 35.0 41.0 33.0 41.0 33 37.16481745285132 39.0 35.0 41.0 32.0 41.0 34 37.08692648837522 39.0 35.0 41.0 32.0 41.0 35 36.996371455449534 39.0 35.0 41.0 32.0 41.0 36 36.970572055727274 39.0 35.0 41.0 32.0 41.0 37 36.900890561304486 39.0 35.0 41.0 31.0 41.0 38 36.79239170362406 39.0 35.0 41.0 31.0 41.0 39 36.78770953724858 39.0 35.0 41.0 31.0 41.0 40 36.709010437665185 39.0 35.0 41.0 31.0 41.0 41 36.66079021636877 39.0 35.0 41.0 31.0 41.0 42 36.585682031984945 39.0 35.0 41.0 31.0 41.0 43 36.5313228508713 39.0 35.0 41.0 31.0 41.0 44 36.45200734668279 39.0 35.0 41.0 31.0 41.0 45 36.3887425525243 39.0 35.0 41.0 31.0 41.0 46 36.332717824665146 39.0 35.0 41.0 31.0 41.0 47 36.2256184204632 39.0 35.0 40.0 30.0 41.0 48 36.18192088876943 38.0 35.0 40.0 30.0 41.0 49 36.16964028132419 39.0 35.0 40.0 30.0 41.0 50 36.05571025399812 38.0 35.0 40.0 30.0 41.0 51 35.15964520897729 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 14.0 10 21.0 11 25.0 12 17.0 13 24.0 14 39.0 15 59.0 16 88.0 17 145.0 18 293.0 19 540.0 20 925.0 21 1424.0 22 2249.0 23 3304.0 24 4629.0 25 6572.0 26 8941.0 27 10493.0 28 11873.0 29 13506.0 30 15717.0 31 20096.0 32 26565.0 33 36932.0 34 69174.0 35 95820.0 36 83864.0 37 128180.0 38 231025.0 39 343368.0 40 220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.81109169914438 21.01509653720378 22.293060968507817 11.880750795144023 2 34.873538502889396 23.36675178067464 22.927294718451822 18.83241499798414 3 32.6585136406397 24.132867446131794 25.436097298750166 17.77252161447834 4 29.09868745240335 26.809479012677507 24.821932535949472 19.26990099896967 5 25.620301930744077 29.21023159969538 24.761277606056534 20.40818886350401 6 26.009676118801234 34.409353581507865 24.7139721363616 14.866998163329301 7 79.4877928593827 6.030013887022354 9.110872194597501 5.371321058997446 8 79.36352640774089 5.404829100031358 9.31863996774627 5.913004524481477 9 73.37741343009452 7.428033866415805 12.0177395511356 7.1768131523540735 10 38.8048201406621 27.176096402813243 18.392599560990906 15.626483895533754 11 30.547775836581103 26.164404425928417 24.53505353223133 18.75276620525915 12 27.766250055996057 23.531424987680868 28.99359405097881 19.70873090534426 13 25.718944586301124 25.129059714196124 29.891054069793487 19.26094162970927 14 21.36737893652287 28.46606638892622 29.009004166106706 21.157550508444206 15 19.801191596111632 25.81463065000224 34.68404784303185 19.700129910854276 16 23.055592886260808 25.746808224700978 31.13999014469381 20.0576087443444 17 22.472606728486312 24.547775836581103 28.201227433588677 24.778390001343904 18 23.231196523764726 24.066030551449177 31.209246069076734 21.49352685570936 19 24.248264122205796 26.05277068494378 28.022488016843617 21.67647717600681 20 25.981543699323566 26.039869193208798 28.25471486807329 19.723872239394346 21 24.551180396900058 27.043856112529678 29.127178246651436 19.277785243918828 22 22.594095775657394 25.267302781884155 27.610715405635446 24.527886036823006 23 21.308963848945034 27.110334632441873 28.30641042870582 23.27429108990727 24 22.607803610625812 24.611835326792995 29.617166151502932 23.16319491107826 25 21.455091161582224 26.163687676387582 28.07140617300542 24.309814989024773 26 20.42521166509878 27.703176096402814 28.449312368409263 23.422299870089144 27 21.48940554584957 27.040899520673744 28.548850960892352 22.92084397258433 28 20.46624557631143 26.621063477131212 29.347757917842582 23.56493302871478 29 21.051650763786228 26.392957935761324 28.732697218115845 23.822694082336604 30 22.895847332347802 26.61076020248175 28.48264122205797 22.010751243112484 31 23.597903507593067 27.273036778210813 25.28092102315997 23.84813869103615 32 22.213860144245846 29.123146530484256 25.70998521704072 22.95300810822918 33 22.480490973435472 27.828607266048472 25.989159163194913 23.70174259732115 34 21.435470142901938 26.621153070823816 27.72369305200914 24.219683734265107 35 19.78381041974645 27.982350042557 27.12888052681091 25.104959010885636 36 22.212785019934596 28.3658110469023 25.93629888455853 23.48510504860458 37 21.926533172064687 28.04694709492452 27.59817228867088 22.42834744433992 38 21.2948976392062 30.849796174349326 24.995027550060474 22.860278636384 39 21.690095417282624 27.771715271244908 25.752811002105453 24.78537830936702 40 22.27854679030596 25.492989293553737 28.514088608161988 23.71437530797832 41 19.528199614747123 26.57402678851409 26.64614971106034 27.25162388567845 42 22.42440532186534 25.82305245710702 26.79666711463513 24.95587510639251 43 23.438068359987458 24.57913362899252 27.070644626618286 24.91215338440174 44 21.229404649912645 26.71424091743941 26.754647672803834 25.301706759844105 45 22.032880885185683 25.502844599740175 26.53388881422748 25.93038570084666 46 22.471800385252877 26.725440129014917 26.34439815436993 24.458361331362273 47 20.220758858576357 26.331048694171933 28.615419074497154 24.83277337275456 48 20.252743806835998 25.60865475070555 28.436410876674284 25.702190565784168 49 21.639206199883528 23.781928952201763 29.822246113873586 24.756618734041126 50 20.69488867983694 24.865654257940243 28.996371455449538 25.443085606773288 51 19.972853111140974 24.47117322940465 26.701876987860057 28.85409667159432 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 462.0 1 873.5 2 1285.0 3 3678.5 4 6072.0 5 4348.5 6 2625.0 7 2636.5 8 2648.0 9 2678.5 10 2709.0 11 2785.5 12 2862.0 13 2794.0 14 2726.0 15 2861.0 16 2996.0 17 2932.0 18 2868.0 19 2849.0 20 2830.0 21 3169.0 22 3508.0 23 3808.0 24 4108.0 25 5140.0 26 6998.5 27 7825.0 28 9493.0 29 11161.0 30 12850.0 31 14539.0 32 16408.5 33 18278.0 34 20734.0 35 23190.0 36 26061.5 37 28933.0 38 33434.5 39 37936.0 40 43015.0 41 48094.0 42 54401.5 43 60709.0 44 68239.5 45 75770.0 46 87356.0 47 98942.0 48 111287.0 49 123632.0 50 122749.0 51 121866.0 52 107732.0 53 93598.0 54 80262.5 55 66927.0 56 60562.5 57 54198.0 58 50100.5 59 46003.0 60 42295.5 61 38588.0 62 35555.0 63 32522.0 64 28688.5 65 24855.0 66 19723.0 67 14591.0 68 12710.5 69 10830.0 70 8684.5 71 6539.0 72 6007.0 73 5475.0 74 4383.0 75 2606.0 76 1921.0 77 1359.5 78 798.0 79 699.5 80 601.0 81 502.5 82 404.0 83 291.5 84 179.0 85 117.5 86 56.0 87 35.5 88 15.0 89 10.0 90 5.0 91 4.5 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1116150.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.421017473636134 #Duplication Level Percentage of deduplicated Percentage of total 1 71.24791502701669 17.399465778349168 2 11.562985019277091 5.647597184063175 3 4.786652210010195 3.50684751782634 4 2.5979767369206774 2.537809411537602 5 1.5888745218260416 1.9400966230464507 6 1.0011138195799936 1.466893084863698 7 0.6784800489517733 1.1598421191675328 8 0.5143243574586881 1.004825929649224 9 0.370678842268993 0.814711903574246 >10 3.6252763430527843 21.367767335024475 >50 1.6365173686498382 28.98665133062529 >100 0.38327495138737283 11.99378943820503 >500 0.0033360488998900317 0.5863103353403336 >1k 0.0025947046999144695 1.587392008727511 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 4774 0.4277202884916902 TruSeq Adapter, Index 19 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 3415 0.3059624602427989 TruSeq Adapter, Index 19 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2844 0.25480446176589167 No Hit CTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGCT 2807 0.25148949513954216 TruSeq Adapter, Index 13 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 1371 0.12283295256013976 TruSeq Adapter, Index 19 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 1220 0.10930430497692963 TruSeq Adapter, Index 13 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7918738520808134E-4 0.0 0.0 0.26725798503785336 0.0 2 1.7918738520808134E-4 0.0 0.0 1.3007212292254626 0.0 3 1.7918738520808134E-4 0.0 0.0 1.8734041123504905 0.0 4 1.7918738520808134E-4 0.0 0.0 2.4785199121981814 0.0 5 2.6878107781212203E-4 0.0 0.0 4.129014917349819 0.0 6 2.6878107781212203E-4 0.0 0.0 5.047708641311652 0.0 7 2.6878107781212203E-4 0.0 0.0 5.9202616135824035 0.0 8 2.6878107781212203E-4 0.0 0.0 7.468171840702414 0.0 9 2.6878107781212203E-4 0.0 0.0 8.021860860995385 0.0 10 2.6878107781212203E-4 0.0 0.0 9.192133673789366 0.0 11 2.6878107781212203E-4 0.0 0.0 10.825605877346234 0.0 12 2.6878107781212203E-4 0.0 0.0 12.107870805895265 0.0 13 2.6878107781212203E-4 0.0 0.0 12.639071809344623 0.0 14 2.6878107781212203E-4 0.0 0.0 12.841822335707565 0.0 15 2.6878107781212203E-4 0.0 0.0 13.234511490391077 0.0 16 2.6878107781212203E-4 0.0 0.0 14.092998252922994 0.0 17 2.6878107781212203E-4 0.0 0.0 15.057026385342471 0.0 18 2.6878107781212203E-4 0.0 0.0 16.194597500335977 0.0 19 2.6878107781212203E-4 0.0 0.0 16.808762263136675 0.0 20 2.6878107781212203E-4 0.0 0.0 17.44765488509609 0.0 21 2.6878107781212203E-4 0.0 0.0 18.141378846929175 0.0 22 2.6878107781212203E-4 0.0 0.0 18.88115396676074 0.0 23 2.6878107781212203E-4 0.0 0.0 19.650226224073826 0.0 24 2.6878107781212203E-4 0.0 0.0 20.220758858576357 0.0 25 2.6878107781212203E-4 0.0 0.0 20.72391703624065 0.0 26 2.6878107781212203E-4 0.0 0.0 21.210948349236215 0.0 27 2.6878107781212203E-4 0.0 0.0 21.68230076602607 0.0 28 2.6878107781212203E-4 0.0 0.0 22.169690453792054 0.0 29 2.6878107781212203E-4 0.0 0.0 22.670340008063434 0.0 30 2.6878107781212203E-4 0.0 0.0 23.248936074900328 0.0 31 2.6878107781212203E-4 0.0 0.0 23.756663530887426 0.0 32 2.6878107781212203E-4 0.0 0.0 24.274067105675762 0.0 33 2.6878107781212203E-4 0.0 0.0 24.77247681763204 0.0 34 2.6878107781212203E-4 0.0 0.0 25.273484746673834 0.0 35 2.6878107781212203E-4 0.0 0.0 25.76562290014783 0.0 36 2.6878107781212203E-4 0.0 0.0 26.25632755454016 0.0 37 2.6878107781212203E-4 0.0 0.0 26.74102943152802 0.0 38 2.6878107781212203E-4 0.0 0.0 27.235676208394928 0.0 39 2.6878107781212203E-4 0.0 0.0 27.742149352685573 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 30 2.165445E-6 45.000004 1 ATCGTCC 30 2.165445E-6 45.000004 11 CGTACCG 30 2.165445E-6 45.000004 37 ACCGTAC 30 2.165445E-6 45.000004 35 GCTACGA 60 0.0 45.000004 10 ATACGAG 30 2.165445E-6 45.000004 1 ATCGCAC 30 2.165445E-6 45.000004 30 GCGTAAG 125 0.0 45.000004 1 TGCGTAG 60 0.0 45.000004 1 TCACGCG 20 7.0331997E-4 45.0 1 ACACGAA 20 7.0331997E-4 45.0 27 TCCGCAA 20 7.0331997E-4 45.0 32 CGAAAGT 20 7.0331997E-4 45.0 17 CTATCGT 20 7.0331997E-4 45.0 20 ACGTTAC 20 7.0331997E-4 45.0 14 GCACGTC 20 7.0331997E-4 45.0 3 GCACGTA 20 7.0331997E-4 45.0 12 CAACCGG 35 1.2118835E-7 45.0 2 ACCGAAC 20 7.0331997E-4 45.0 11 CGCGACA 20 7.0331997E-4 45.0 34 >>END_MODULE