##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934825.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 208812 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.679419765147596 31.0 31.0 34.0 30.0 34.0 2 31.795960002298717 33.0 31.0 34.0 30.0 34.0 3 31.80347872727621 33.0 31.0 34.0 30.0 34.0 4 35.58028753136793 37.0 35.0 37.0 33.0 37.0 5 32.98342528207191 37.0 35.0 37.0 28.0 37.0 6 34.028269448116006 37.0 35.0 37.0 27.0 37.0 7 35.36885811160278 37.0 35.0 37.0 32.0 37.0 8 35.31647127559719 37.0 35.0 37.0 33.0 37.0 9 37.396586403080285 39.0 37.0 39.0 34.0 39.0 10 36.80222879911116 39.0 37.0 39.0 32.0 39.0 11 36.639599256747694 39.0 37.0 39.0 32.0 39.0 12 36.94689481447426 39.0 37.0 39.0 33.0 39.0 13 36.8588874202632 39.0 37.0 39.0 33.0 39.0 14 37.82211271382871 40.0 37.0 41.0 33.0 41.0 15 37.98089669176101 40.0 37.0 41.0 33.0 41.0 16 37.94446200409938 40.0 37.0 41.0 33.0 41.0 17 37.91703063042354 39.0 37.0 41.0 33.0 41.0 18 37.84585177097102 39.0 37.0 40.0 33.0 41.0 19 37.644742639311914 39.0 36.0 40.0 33.0 41.0 20 37.4637233492328 39.0 35.0 40.0 33.0 41.0 21 37.369681819052545 39.0 35.0 40.0 33.0 41.0 22 37.337456659578955 39.0 35.0 40.0 33.0 41.0 23 37.10865754841676 39.0 35.0 40.0 32.0 41.0 24 36.810762791410454 39.0 35.0 40.0 32.0 41.0 25 36.583936746930256 38.0 35.0 40.0 31.0 41.0 26 36.89068157002471 39.0 35.0 40.0 32.0 41.0 27 36.78740206501542 39.0 35.0 40.0 32.0 41.0 28 36.83098672490087 39.0 35.0 40.0 32.0 41.0 29 36.90559450606287 39.0 35.0 40.0 32.0 41.0 30 36.5872076317453 38.0 35.0 40.0 31.0 41.0 31 36.43785318851407 38.0 35.0 40.0 31.0 41.0 32 36.11984943394058 38.0 35.0 40.0 30.0 41.0 33 35.897865065226135 38.0 35.0 40.0 30.0 41.0 34 35.80086393502289 38.0 35.0 40.0 29.0 41.0 35 35.55753979656342 38.0 35.0 40.0 27.0 41.0 36 35.406154818688584 38.0 35.0 40.0 26.0 41.0 37 35.39694078884355 38.0 35.0 40.0 25.0 41.0 38 35.25045974369289 38.0 35.0 40.0 25.0 41.0 39 35.18425186291976 38.0 35.0 40.0 25.0 41.0 40 35.05907227553972 38.0 35.0 40.0 24.0 41.0 41 34.85947167787292 38.0 35.0 40.0 23.0 41.0 42 34.96038062946574 38.0 35.0 40.0 23.0 41.0 43 34.93091872114629 38.0 35.0 40.0 23.0 41.0 44 34.8593615309465 38.0 35.0 40.0 23.0 41.0 45 34.854807194988794 38.0 35.0 40.0 23.0 41.0 46 34.68681397620826 38.0 34.0 40.0 23.0 41.0 47 34.6214968488401 38.0 34.0 40.0 23.0 41.0 48 34.600937685573626 38.0 34.0 40.0 23.0 41.0 49 34.619600406106926 38.0 34.0 40.0 22.0 41.0 50 34.55152002758462 38.0 34.0 40.0 22.0 41.0 51 33.575694883435816 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 4.0 12 10.0 13 5.0 14 15.0 15 15.0 16 29.0 17 65.0 18 107.0 19 188.0 20 316.0 21 488.0 22 818.0 23 1174.0 24 1704.0 25 2478.0 26 3499.0 27 3983.0 28 3760.0 29 3734.0 30 4118.0 31 4903.0 32 6161.0 33 8814.0 34 13470.0 35 18971.0 36 22833.0 37 30044.0 38 43183.0 39 33912.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.74842442005249 22.65961726337567 23.640403808210255 17.95155450836159 2 36.166503840775434 22.837289044690916 25.456870294810642 15.539336819723005 3 26.93714920598433 23.642319406930635 35.212056778346074 14.20847460873896 4 24.821849319004656 24.32666704978641 34.610079880466635 16.241403750742293 5 18.78244545332644 33.27778097044231 32.13177403597494 15.807999540256306 6 20.502174204547632 32.842940060916035 33.25479378579775 13.400091948738579 7 66.64894737850315 7.256766852479743 20.366166695400647 5.728119073616459 8 64.46755933567036 7.4904698963661085 20.49642740838649 7.545543359577035 9 59.16566097733846 9.411815412907304 23.59299273988085 7.829530869873379 10 30.003543857632703 23.771143420876196 31.351167557420073 14.874145164071031 11 21.360841330957992 24.68584180985767 34.33806486217267 19.615251997011665 12 20.08170028542421 21.83543091393215 39.9440645173649 18.138804283278738 13 19.536233549795988 25.1345708101067 38.895274217956825 16.43392142214049 14 15.218474034059346 27.441430569124382 37.846005018868645 19.49409037794763 15 14.264984770990171 25.593835603317817 41.85631093998429 18.284868685707718 16 14.024577131582477 26.37252648315231 38.30574871175986 21.297147673505354 17 13.759745608489935 27.181866942512883 35.267609141237095 23.790778307760093 18 15.0211673658602 25.60724479436048 40.126046395801005 19.245541443978315 19 16.048407179664004 27.746489665344903 36.30203245024232 19.903070704748767 20 17.41853916441584 28.012278987797636 36.6693485048752 17.89983334291133 21 16.107311840315692 28.303449993295406 37.46958987031397 18.11964829607494 22 13.720954734402238 26.52050648430167 35.26856694059728 24.48997184069881 23 14.201291113537536 26.666570886730646 35.51759477424669 23.614543225485125 24 17.226979292377834 24.330019347547076 36.89299465547957 21.55000670459552 25 13.701798747198438 27.917935750818916 33.95733961649714 24.42292588548551 26 13.47958929563435 28.190429668792984 34.90747658180564 23.422504453767022 27 15.725628795279963 27.50033522977607 34.58661379614198 22.187422178801985 28 12.3608796429324 28.30297109361531 34.84905082083405 24.48709844261824 29 15.895638181713695 25.25716912821102 33.15614045169818 25.691052238377104 30 17.600042143171848 29.21096488707546 30.32632224201674 22.862670727735953 31 17.72264046127617 31.76062678390131 27.68614830565293 22.83058444916959 32 17.589985249889853 29.357029289504432 29.271306246767427 23.781679213838284 33 17.86008466946344 28.915004884776735 29.745895829741585 23.479014616018237 34 17.69486427983066 26.562170756469932 30.74535946209988 24.997605501599523 35 17.329463823918164 25.09051203953796 30.119437580215696 27.46058655632818 36 17.49324751451066 28.438499703082197 30.30908185353332 23.759170928873818 37 19.03195218665594 29.197555696032794 31.107886519931803 20.66260559737946 38 18.577955289925864 31.012106583912804 29.857479455203723 20.552458670957606 39 21.62615175373063 27.081776909373023 31.416297913912995 19.875773422983354 40 22.548512537593624 24.564680190793634 32.40809915138977 20.478708120222976 41 17.795912112330708 24.878359481255867 31.83054613719518 25.49518226921824 42 18.53341761967703 23.740493841350112 34.34764285577457 23.378445683198283 43 20.864701262379555 23.774016818956763 31.850659923759174 23.510621994904508 44 19.516598662912095 26.364385188590695 28.726318410819303 25.39269773767791 45 22.272187422178803 23.983295979158285 28.001264295155455 25.743252303507465 46 22.099304637664503 25.302185698139958 30.696511694730187 21.901997969465356 47 17.31557573319541 24.97318161791468 35.56069574545524 22.150546903434666 48 17.969273796525105 23.15240503419344 35.28437063004042 23.59395053924104 49 20.58885504664483 21.216213627569296 36.56159607685382 21.633335248932053 50 19.964848763481026 20.650154205696992 34.38451813114189 25.000478899680097 51 18.808784935731662 20.49786410742678 31.4637089822424 29.22964197459916 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1514.0 1 2061.5 2 2609.0 3 4724.0 4 6839.0 5 4503.0 6 2167.0 7 2210.5 8 2254.0 9 2476.0 10 2698.0 11 2617.0 12 2536.0 13 2599.0 14 2662.0 15 2441.5 16 2221.0 17 2168.5 18 2116.0 19 2012.5 20 1909.0 21 1716.5 22 1524.0 23 1579.0 24 1634.0 25 1516.5 26 1834.0 27 2269.0 28 2477.5 29 2686.0 30 2737.5 31 2789.0 32 3352.0 33 3915.0 34 3878.5 35 3842.0 36 4183.0 37 4524.0 38 4762.5 39 5001.0 40 5614.0 41 6227.0 42 8066.0 43 9905.0 44 11557.0 45 13209.0 46 16659.0 47 20109.0 48 23489.0 49 26869.0 50 26510.5 51 26152.0 52 20680.0 53 15208.0 54 12348.0 55 9488.0 56 7837.5 57 6187.0 58 5312.5 59 4438.0 60 4079.0 61 3720.0 62 3327.5 63 2935.0 64 2447.5 65 1960.0 66 1661.5 67 1363.0 68 1094.5 69 826.0 70 642.0 71 458.0 72 386.0 73 314.0 74 242.5 75 120.5 76 70.0 77 55.0 78 40.0 79 27.5 80 15.0 81 18.0 82 21.0 83 13.0 84 5.0 85 8.5 86 12.0 87 6.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 208812.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.37915445472483 #Duplication Level Percentage of deduplicated Percentage of total 1 74.28589927591752 32.96745397774074 2 9.951547982604755 8.832825699672432 3 4.305646980112011 5.732429170737314 4 2.4118097745740212 4.2813631400494225 5 1.7039139302247783 3.7809129743501333 6 1.3143553939289299 3.49979886213436 7 1.055369109410914 3.278547209930464 8 0.8503383008341516 3.0189835833189664 9 0.7586139917340211 3.0299982759611517 >10 3.253515199257573 21.14677317395552 >50 0.06366746161067886 2.066931019290079 >100 0.037768833158877295 3.4959676646936 >500 0.003237328556475197 1.1718675171924986 >1k 0.004316438075300262 3.6961477309733155 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4030 1.9299657107829054 No Hit GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 1488 0.7126027239813804 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 1125 0.5387621401068904 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCC 1075 0.5148171561021397 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 984 0.4712372852134935 No Hit CTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGCT 852 0.4080225274409517 TruSeq Adapter, Index 15 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 611 0.29260770453805335 TruSeq Adapter, Index 14 (95% over 21bp) TGGAGAGAAAGAAAGAAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAG 465 0.22268835124418135 No Hit ACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 389 0.1862919755569603 TruSeq Adapter, Index 15 (95% over 22bp) CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 387 0.1853341761967703 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 377 0.18054517939582018 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 366 0.175277282914775 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG 336 0.1609102925119246 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 330 0.15803689443135452 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 319 0.15276899795030938 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 287 0.13744420818726893 No Hit GCCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG 262 0.1254717161848936 No Hit ACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG 261 0.12499281650479857 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGC 236 0.11302032450242322 No Hit AGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG 218 0.10440013026071299 TruSeq Adapter, Index 15 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4401088060073176 0.0 2 0.0 0.0 0.0 2.3260157462214814 0.0 3 0.0 0.0 0.0 3.15307549374557 0.0 4 0.0 0.0 0.0 4.232036472999636 0.0 5 0.0 0.0 0.0 6.888492998486677 0.0 6 0.0 0.0 0.0 8.36063061509875 0.0 7 0.0 0.0 0.0 9.939562860372009 0.0 8 0.0 0.0 0.0 12.373809934294965 0.0 9 0.0 0.0 0.0 13.26839453671245 0.0 10 0.0 0.0 0.0 15.687316820872363 0.0 11 0.0 0.0 0.0 19.530965653314944 0.0 12 0.0 0.0 0.0 22.109840430626594 0.0 13 0.0 0.0 0.0 23.134206846349826 0.0 14 0.0 0.0 0.0 23.51397429266517 0.0 15 0.0 0.0 0.0 24.310863360343276 0.0 16 0.0 0.0 0.0 26.125414248223283 0.0 17 0.0 0.0 0.0 28.271363714729038 0.0 18 4.788996800950137E-4 0.0 0.0 30.494894929410187 0.0 19 4.788996800950137E-4 0.0 0.0 31.8477865256786 0.0 20 4.788996800950137E-4 0.0 0.0 33.09867249008678 0.0 21 4.788996800950137E-4 0.0 0.0 34.61247437886711 0.0 22 4.788996800950137E-4 0.0 0.0 36.166503840775434 0.0 23 4.788996800950137E-4 0.0 0.0 37.557228511771356 0.0 24 4.788996800950137E-4 0.0 0.0 38.579200429094115 0.0 25 4.788996800950137E-4 0.0 0.0 39.320537133881196 0.0 26 4.788996800950137E-4 0.0 0.0 39.928739727601865 0.0 27 4.788996800950137E-4 0.0 0.0 40.46462846962818 0.0 28 4.788996800950137E-4 0.0 0.0 40.94975384556443 0.0 29 4.788996800950137E-4 0.0 0.0 41.53257475624006 0.0 30 4.788996800950137E-4 0.0 0.0 42.091450682910946 0.0 31 4.788996800950137E-4 0.0 0.0 42.53586958603912 0.0 32 4.788996800950137E-4 0.0 0.0 42.91132693523361 0.0 33 4.788996800950137E-4 0.0 0.0 43.27481179242572 0.0 34 4.788996800950137E-4 0.0 0.0 43.59567457808938 0.0 35 4.788996800950137E-4 0.0 0.0 43.96059613432178 0.0 36 4.788996800950137E-4 0.0 0.0 44.23835794877689 0.0 37 4.788996800950137E-4 0.0 0.0 44.588433614926345 0.0 38 4.788996800950137E-4 0.0 0.0 44.87529452330326 0.0 39 4.788996800950137E-4 0.0 0.0 45.160718732639886 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 75 0.0 45.000004 1 TGATCGG 20 7.0200174E-4 45.0 2 CGTGGCG 25 3.8798105E-5 45.0 27 AAATCTA 20 7.0200174E-4 45.0 32 ATGATGG 50 2.1827873E-11 45.0 2 GGTAATT 35 1.2055534E-7 45.0 8 CTACTCA 40 6.7684596E-9 45.0 29 CCCTACA 35 1.2055534E-7 45.0 27 GCGCGAC 35 1.2055534E-7 45.0 9 AACTTGT 20 7.0200174E-4 45.0 45 GGGTAAT 50 2.1827873E-11 45.0 7 TAAGTAG 25 3.8798105E-5 45.0 1 CGCGACC 25 3.8798105E-5 45.0 10 GTGGCGA 25 3.8798105E-5 45.0 28 GTAATCA 20 7.0200174E-4 45.0 20 AGTATAG 20 7.0200174E-4 45.0 1 CGGGGTT 20 7.0200174E-4 45.0 6 ACGATGG 20 7.0200174E-4 45.0 2 AGTGCGG 20 7.0200174E-4 45.0 2 CTACGAA 40 6.7684596E-9 45.0 11 >>END_MODULE