##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934824.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 116955 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.81897310931555 33.0 31.0 34.0 30.0 34.0 2 31.932546705998032 33.0 31.0 34.0 30.0 34.0 3 31.927134367919287 33.0 31.0 34.0 30.0 34.0 4 35.69172758753367 37.0 35.0 37.0 33.0 37.0 5 33.202624941216705 37.0 35.0 37.0 30.0 37.0 6 34.218511393270916 37.0 35.0 37.0 28.0 37.0 7 35.47959471591638 37.0 35.0 37.0 32.0 37.0 8 35.44917275875336 37.0 35.0 37.0 33.0 37.0 9 37.539489547261766 39.0 37.0 39.0 35.0 39.0 10 37.006823137104014 39.0 37.0 39.0 33.0 39.0 11 36.84306784660767 39.0 37.0 39.0 33.0 39.0 12 37.06619640032491 39.0 37.0 39.0 34.0 39.0 13 36.95580351417212 39.0 37.0 39.0 33.0 39.0 14 37.97598221538198 40.0 37.0 41.0 33.0 41.0 15 38.161566414432905 40.0 37.0 41.0 33.0 41.0 16 38.142422299174896 40.0 37.0 41.0 33.0 41.0 17 38.058304476080544 40.0 37.0 41.0 33.0 41.0 18 37.894335428156126 39.0 37.0 40.0 34.0 41.0 19 37.59973494078919 39.0 36.0 40.0 34.0 41.0 20 37.36782523192681 39.0 35.0 40.0 33.0 41.0 21 37.24738574665469 39.0 35.0 40.0 33.0 41.0 22 37.16861185926211 39.0 35.0 40.0 33.0 41.0 23 36.9580436920183 39.0 35.0 40.0 33.0 41.0 24 36.66618785002779 38.0 35.0 40.0 32.0 41.0 25 36.456431961010644 38.0 35.0 40.0 31.0 41.0 26 36.686058740541235 38.0 35.0 40.0 32.0 41.0 27 36.59384378607157 38.0 35.0 40.0 32.0 41.0 28 36.630644264888204 38.0 35.0 40.0 32.0 41.0 29 36.61191911418922 38.0 35.0 40.0 32.0 41.0 30 36.265426873583856 38.0 35.0 40.0 31.0 41.0 31 36.064794151596764 38.0 35.0 40.0 31.0 41.0 32 35.758659313411144 38.0 35.0 40.0 30.0 41.0 33 35.45756915052798 38.0 35.0 40.0 27.0 41.0 34 35.302475311017055 38.0 35.0 40.0 25.0 41.0 35 35.0828267282288 38.0 35.0 40.0 23.0 41.0 36 34.856765422598436 38.0 35.0 40.0 22.0 41.0 37 34.83226882134154 38.0 35.0 40.0 22.0 41.0 38 34.70298832884443 38.0 35.0 40.0 21.0 41.0 39 34.519900816553374 38.0 34.0 40.0 20.0 41.0 40 34.49332649309564 38.0 35.0 40.0 20.0 41.0 41 34.37062117908597 38.0 34.0 40.0 18.0 41.0 42 34.35194733016972 38.0 34.0 40.0 18.0 41.0 43 34.240819118464366 38.0 34.0 40.0 18.0 41.0 44 34.12788679406609 38.0 34.0 40.0 18.0 41.0 45 34.13683040485657 38.0 34.0 40.0 18.0 41.0 46 34.01639946988158 38.0 34.0 40.0 18.0 41.0 47 33.94762087982557 38.0 34.0 40.0 17.0 41.0 48 33.92003762130734 38.0 34.0 40.0 17.0 41.0 49 33.89631909708862 37.0 34.0 40.0 16.0 41.0 50 33.79899106493951 37.0 34.0 40.0 15.0 41.0 51 32.92022572784404 36.0 32.0 40.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 5.0 11 1.0 12 4.0 13 4.0 14 6.0 15 11.0 16 24.0 17 32.0 18 77.0 19 108.0 20 219.0 21 359.0 22 567.0 23 900.0 24 1315.0 25 1854.0 26 2316.0 27 2672.0 28 2587.0 29 2401.0 30 2299.0 31 2717.0 32 3254.0 33 4473.0 34 7498.0 35 11112.0 36 11996.0 37 14512.0 38 22023.0 39 21601.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.849771279551966 22.86434953614638 23.025950151767773 20.25992903253388 2 39.27578983369672 22.66341755375999 23.334615877901758 14.72617673464153 3 25.971527510580994 22.615535889872174 38.14544055405925 13.267496045487581 4 23.511607028344237 23.600530118421613 37.076653413706126 15.811209439528023 5 17.623872429566926 32.19699884570989 34.95788978667009 15.221238938053098 6 20.50617758967124 31.02475311017058 36.40631011927665 12.062759180881535 7 62.677953058868795 8.135607712368005 24.140053866871874 5.046385361891326 8 61.20046171604463 7.254072079004746 24.566713693300844 6.97875251164978 9 56.402034970715235 9.454063528707621 27.562737805138728 6.581163695438416 10 30.013252960540378 23.880124834337995 33.056303706553805 13.050318498567826 11 21.10726347740584 24.021204736864608 36.47043734769783 18.40109443803172 12 20.391603608225388 21.33641144029755 41.51425762045231 16.757727331024753 13 17.593091359924756 25.433713821555298 42.408618699499804 14.564576119020137 14 14.133641144029754 28.078320721645078 39.99828994057544 17.789748193749734 15 12.335513659099654 25.45081441580095 45.48929075285366 16.724381172245735 16 13.296567055705186 25.92193578726861 42.17605061775897 18.60544653926724 17 13.799324526527295 26.218631097430634 37.58967124107563 22.39237313496644 18 14.728741823778376 25.862938737121116 42.19828139027831 17.210038048822195 19 15.760762686503357 27.074515839425423 39.35872771578812 17.8059937582831 20 16.904792441537346 28.296353298277115 38.77901757086059 16.019836689324954 21 15.14001111538626 28.04155444401693 40.14193493223889 16.676499508357914 22 13.562481296225043 28.121927236971484 36.47043734769783 21.84515411910564 23 14.206318669573767 26.956521739130434 37.239109059039805 21.598050532255996 24 16.791928519516052 25.672267111282114 38.04882219657133 19.486982172630498 25 13.587277157881235 28.08772604848018 36.4721474071224 21.852849386516183 26 13.5547860288145 29.18301910991407 38.51994356803899 18.74225129323244 27 17.370783634731307 27.612329528451113 37.687999657988115 17.328887178829465 28 14.66461459535719 26.953101620281306 37.80257363943397 20.579710144927535 29 14.882647171989227 25.402932751913127 38.611431747253214 21.102988328844425 30 19.474156726946262 28.25958702064897 34.447437048437436 17.818819203967337 31 18.228378436150656 29.133427386601685 33.24526527296823 19.392928904279426 32 16.809884143473987 28.381001239793086 32.50309948270703 22.30601513402591 33 19.28947030909324 30.158608011628402 30.309948270702407 20.241973408575948 34 16.125860373647985 26.352015732546707 34.36535419605831 23.156769697746995 35 15.67696977469967 26.70941815228079 33.51203454320037 24.101577529819163 36 21.24150314223419 29.67551622418879 31.2778419050062 17.805138728570817 37 19.94185797956479 27.663631311188063 33.84378607156599 18.55072463768116 38 17.571715617117693 29.717412680090632 28.37330597238254 24.337565730409132 39 17.137360523278183 30.11585652601428 32.50737463126844 20.2394083194391 40 18.94061818648198 25.981787867128382 35.36915907827797 19.708434868111667 41 16.658543884399982 27.482365012184175 31.338549014578255 24.520542088837587 42 19.389508785430294 27.220725920225732 31.96870591253046 21.421059381813517 43 21.468941045701335 26.08439143260228 32.21580949938011 20.230858022316276 44 19.115044247787612 26.375101534778334 30.79304005814202 23.716814159292035 45 19.414304647086485 25.036125005343933 31.693386345175494 23.85618400239408 46 20.260784062246163 25.807361805822755 33.67791030738318 20.253943824547903 47 16.63716814159292 26.372536445641487 35.911247915865076 21.079047496900515 48 17.079218502842973 24.058826044205038 34.96045487580693 23.901500577145054 49 19.293745457654655 23.235432431276987 35.95143431234236 21.519387798726004 50 17.488777735026293 23.154204608610147 35.004916420845625 24.352101235517935 51 16.321662177760675 22.972083279893976 31.858407079646017 28.847847462699328 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1284.0 1 1800.0 2 2316.0 3 3835.0 4 5354.0 5 3524.0 6 1694.0 7 1803.5 8 1913.0 9 2001.0 10 2089.0 11 2054.0 12 2019.0 13 1962.5 14 1906.0 15 1846.0 16 1786.0 17 1499.5 18 1213.0 19 1208.0 20 1203.0 21 1064.0 22 925.0 23 1024.5 24 1124.0 25 1172.0 26 1224.0 27 1228.0 28 1287.0 29 1346.0 30 1440.5 31 1535.0 32 1670.5 33 1806.0 34 2065.0 35 2324.0 36 2378.5 37 2433.0 38 2653.5 39 2874.0 40 3386.5 41 3899.0 42 5088.5 43 6278.0 44 6687.5 45 7097.0 46 8530.5 47 9964.0 48 11595.5 49 13227.0 50 12849.0 51 12471.0 52 9918.5 53 7366.0 54 5970.0 55 4574.0 56 3780.0 57 2986.0 58 2738.0 59 2490.0 60 2321.5 61 2153.0 62 1927.5 63 1702.0 64 1430.0 65 1158.0 66 964.0 67 770.0 68 645.0 69 520.0 70 420.5 71 321.0 72 252.5 73 184.0 74 154.0 75 83.0 76 42.0 77 33.0 78 24.0 79 15.0 80 6.0 81 5.5 82 5.0 83 3.0 84 1.0 85 0.5 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 116955.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.959941857979565 #Duplication Level Percentage of deduplicated Percentage of total 1 76.38469101635046 35.87020648967552 2 9.193037398492407 8.634090034628704 3 3.856378136265977 5.4328587918430165 4 2.2158697789592514 4.162284639391219 5 1.6659990532027238 3.9117609336924457 6 1.2454025709187575 3.5090419392073877 7 1.061505407669058 3.48937625582489 8 0.901278176322785 3.385917660638707 9 0.7355886529987983 3.1088880338591767 >10 2.6546739011689304 18.11722457355393 >50 0.04551909981428207 1.4321747680731907 >100 0.027311459888569242 2.5873199093668506 >500 0.010924583955427697 3.6065153264075924 >1k 0.001820763992571283 2.7523406438373734 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3219 2.7523406438373734 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCC 901 0.7703817707665341 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 892 0.7626865033559916 No Hit CCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 736 0.6293018682399214 No Hit GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 627 0.5361036296011287 No Hit CTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCT 534 0.456585866358856 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 528 0.451455688085161 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 290 0.2479586165619255 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCG 278 0.2376982600145355 No Hit TCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 266 0.22743790346714549 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 248 0.21204736864606044 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGC 236 0.20178701209867042 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 224 0.1915266555512804 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 220 0.1881065367021504 No Hit ACTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 218 0.1863964772775854 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 212 0.18126629900389038 No Hit TGGTTTTTTTTTTGATTTTTCTTTTCTTCTTTAAAAGATTTATTTATGTAT 194 0.16587576418280534 No Hit ACCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTG 154 0.13167457569150529 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTC 133 0.11371895173357274 No Hit CGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTG 127 0.10858877345987772 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGT 119 0.10174853576161771 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.48480184686417854 0.0 2 0.0 0.0 0.0 2.1700654097729895 0.0 3 0.0 0.0 0.0 2.9507075370869136 0.0 4 0.0 0.0 0.0 3.9245863793766835 0.0 5 0.0 0.0 0.0 6.218631097430635 0.0 6 0.0 0.0 0.0 7.5199863195246035 0.0 7 0.0 0.0 0.0 8.889743918601171 0.0 8 0.0 0.0 0.0 11.085460219742636 0.0 9 0.0 0.0 0.0 11.847291693386346 0.0 10 0.0 0.0 0.0 13.739472446667522 0.0 11 0.0 0.0 0.0 17.404129793510325 0.0 12 0.0 0.0 0.0 19.516053182848104 0.0 13 0.0 0.0 0.0 20.305245607284853 0.0 14 0.0 0.0 0.0 20.588260442050363 0.0 15 0.0 0.0 0.0 21.16540549784105 0.0 16 0.0 0.0 0.0 22.502671967850883 0.0 17 0.0 0.0 0.0 24.099012440682312 0.0 18 0.0 0.0 0.0 25.83814287546492 0.0 19 0.0 0.0 0.0 26.907785045530332 0.0 20 0.0 0.0 0.0 27.808131332563807 0.0 21 0.0 0.0 0.0 29.023983583429523 0.0 22 0.0 0.0 0.0 30.135522209396775 0.0 23 0.0 0.0 0.0 31.152152537300672 0.0 24 0.0 0.0 0.0 31.813945534607328 0.0 25 0.0 0.0 0.0 32.35688940190671 0.0 26 0.0 0.0 0.0 32.82801077337437 0.0 27 0.0 0.0 0.0 33.259800778077036 0.0 28 0.0 0.0 0.0 33.675345218246335 0.0 29 0.0 0.0 0.0 34.07549912359455 0.0 30 0.0 0.0 0.0 34.50130392031123 0.0 31 0.0 0.0 0.0 34.86298148860673 0.0 32 0.0 0.0 0.0 35.20328331409517 0.0 33 0.0 0.0 0.0 35.50510880253089 0.0 34 0.0 0.0 0.0 35.818049677226284 0.0 35 0.0 0.0 0.0 36.12158522508657 0.0 36 0.0 0.0 0.0 36.340472831430894 0.0 37 0.0 0.0 0.0 36.617502458210424 0.0 38 0.0 0.0 0.0 36.898807233551366 0.0 39 0.0 0.0 0.0 37.18866230601513 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAGGGA 30 2.1487576E-6 45.000004 4 GTTTAGG 30 2.1487576E-6 45.000004 2 TACGGGG 30 2.1487576E-6 45.000004 4 AGAACAG 30 2.1487576E-6 45.000004 1 CAGGGCC 30 2.1487576E-6 45.000004 5 GGTATTA 30 2.1487576E-6 45.000004 8 GATAATA 25 3.8692793E-5 45.0 9 CGAAAGG 25 3.8692793E-5 45.0 2 AACTTCC 20 7.007296E-4 45.0 23 GAACTAT 25 3.8692793E-5 45.0 9 GCCGGTA 20 7.007296E-4 45.0 22 ACGGGTA 20 7.007296E-4 45.0 5 TCCTAGA 20 7.007296E-4 45.0 44 ACGGGGC 20 7.007296E-4 45.0 5 CGTTATT 80 0.0 45.0 1 CGGGGCA 25 3.8692793E-5 45.0 6 TCGTGGG 20 7.007296E-4 45.0 3 CGAGGGT 25 3.8692793E-5 45.0 4 GACGGGT 20 7.007296E-4 45.0 4 TAGGGCA 35 1.1994598E-7 45.0 5 >>END_MODULE