##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934817.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 169950 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.693704030597235 31.0 31.0 34.0 30.0 34.0 2 31.811091497499266 33.0 31.0 34.0 30.0 34.0 3 31.811450426596057 33.0 31.0 34.0 30.0 34.0 4 35.58702559576346 37.0 35.0 37.0 33.0 37.0 5 33.15783465725213 37.0 35.0 37.0 28.0 37.0 6 34.14118270079435 37.0 35.0 37.0 28.0 37.0 7 35.43822889085025 37.0 35.0 37.0 32.0 37.0 8 35.44460723742277 37.0 35.0 37.0 33.0 37.0 9 37.50062371285672 39.0 37.0 39.0 35.0 39.0 10 36.78803765813475 39.0 37.0 39.0 32.0 39.0 11 36.65586348926155 39.0 37.0 39.0 32.0 39.0 12 36.99320388349515 39.0 37.0 39.0 33.0 39.0 13 36.89582818476023 39.0 37.0 39.0 33.0 39.0 14 37.89153868784937 40.0 37.0 41.0 33.0 41.0 15 38.068584877905266 40.0 37.0 41.0 33.0 41.0 16 38.08616063548102 40.0 37.0 41.0 33.0 41.0 17 38.02225948808473 40.0 37.0 41.0 33.0 41.0 18 37.88613121506325 39.0 37.0 41.0 33.0 41.0 19 37.64484260076493 39.0 36.0 40.0 33.0 41.0 20 37.415639894086496 39.0 35.0 40.0 33.0 41.0 21 37.35056781406296 39.0 35.0 40.0 33.0 41.0 22 37.35059723448073 39.0 35.0 40.0 33.0 41.0 23 37.06978523095028 39.0 35.0 40.0 32.0 41.0 24 36.81192703736393 39.0 35.0 40.0 32.0 41.0 25 36.651609296852016 38.0 35.0 40.0 31.0 41.0 26 36.88853192115328 38.0 35.0 40.0 32.0 41.0 27 36.74413651073845 38.0 35.0 40.0 32.0 41.0 28 36.82984995586937 39.0 35.0 40.0 32.0 41.0 29 36.874927919976464 39.0 35.0 40.0 33.0 41.0 30 36.54165931156223 38.0 35.0 40.0 31.0 41.0 31 36.40239482200647 38.0 35.0 40.0 31.0 41.0 32 36.11735804648426 38.0 35.0 40.0 30.0 41.0 33 35.837575757575756 38.0 35.0 40.0 30.0 41.0 34 35.609349808767284 38.0 35.0 40.0 27.0 41.0 35 35.39172109443954 38.0 35.0 40.0 25.0 41.0 36 35.18421888790821 38.0 35.0 40.0 25.0 41.0 37 35.057281553398056 38.0 35.0 40.0 24.0 41.0 38 34.98247719917623 38.0 35.0 40.0 24.0 41.0 39 34.842447778758455 38.0 35.0 40.0 23.0 41.0 40 34.75279788172992 38.0 34.0 40.0 23.0 41.0 41 34.76504265960577 38.0 35.0 40.0 23.0 41.0 42 34.8028773168579 38.0 35.0 40.0 23.0 41.0 43 34.56904972050603 38.0 34.0 40.0 22.0 41.0 44 34.4753456899088 38.0 34.0 40.0 22.0 41.0 45 34.51612238893792 38.0 34.0 40.0 22.0 41.0 46 34.46578405413357 38.0 34.0 40.0 22.0 41.0 47 34.418199470432484 38.0 34.0 40.0 22.0 41.0 48 34.39295675198588 38.0 34.0 40.0 22.0 41.0 49 34.36327743453957 38.0 34.0 40.0 21.0 41.0 50 34.219782288908505 37.0 34.0 40.0 20.0 41.0 51 33.370126507796414 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 6.0 12 6.0 13 5.0 14 10.0 15 11.0 16 26.0 17 50.0 18 92.0 19 155.0 20 289.0 21 480.0 22 696.0 23 976.0 24 1405.0 25 2186.0 26 2859.0 27 3242.0 28 3283.0 29 3209.0 30 3390.0 31 4035.0 32 5218.0 33 6945.0 34 10937.0 35 16021.0 36 19086.0 37 23949.0 38 34021.0 39 27355.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.656369520447186 22.533686378346573 24.559576345984112 19.250367755222126 2 36.63724624889673 23.63577522800824 25.049132097675788 14.677846425419242 3 24.241247425713443 24.732568402471315 37.629891144454255 13.39629302736099 4 23.345101500441306 24.5636952044719 38.20653133274492 13.884671962341866 5 19.35686966754928 32.29008531921153 33.53692262430126 14.816122388937922 6 20.055310385407473 32.39894086496029 35.11797587525743 12.427772874374817 7 65.72697852309503 6.880258899676376 22.37422771403354 5.0185348631950575 8 65.88761400411886 6.498381877022654 20.767872903795233 6.846131215063254 9 61.41688731979994 7.33921741688732 22.96675492791998 8.277140335392764 10 30.545454545454547 23.216240070609004 31.66990291262136 14.568402471315093 11 20.620770814945573 26.297146219476314 35.37746395998823 17.70461900558988 12 20.244777875845838 21.02677258017064 40.80906148867314 17.919388055310385 13 18.951456310679614 24.80553103854075 41.47337452191821 14.769638128861429 14 13.964107090320683 28.475433951162106 39.067372756693146 18.493086201824067 15 11.696969696969697 26.4771991762283 44.05648720211827 17.76934392468373 16 13.0867902324213 26.620770814945573 39.81818181818182 20.47425713445131 17 13.267431597528685 26.36834363047955 37.576934392468374 22.78729037952339 18 13.686378346572523 26.27007943512798 41.61753456899088 18.42600764930862 19 14.927331568108269 27.76051779935275 38.313033245072084 18.999117387466903 20 15.622830244189467 29.255075022065313 38.79729332156517 16.324801412180054 21 14.21359223300971 29.477493380406 39.36863783465725 16.940276551927038 22 12.8690791409238 27.693439246837304 35.99293909973522 23.444542512503677 23 13.114445425125037 27.323330391291556 37.458664313033246 22.103559870550164 24 15.858193586348927 25.949396881435717 37.0844365989997 21.107972933215652 25 13.519270373639305 28.594292438952635 34.69079140923801 23.19564577817005 26 14.280082377169755 28.234186525448663 38.19711679905854 19.288614298323036 27 15.411591644601351 28.393056781406294 37.48631950573698 18.709032068255368 28 12.18652544866137 26.85142689026184 37.591644601353345 23.37040305972345 29 15.84819064430715 26.786701971167993 36.47366872609591 20.89143865842895 30 16.681965283907033 30.185937040305973 34.61253309796999 18.519564577817004 31 15.45278022947926 32.7819947043248 30.057664018829065 21.707561047366873 32 18.94851426890262 32.29361576934392 28.802588996763756 19.9552809649897 33 17.85701676963813 30.7825831126802 29.77758164165931 21.582818476022357 34 17.194468961459254 29.870550161812297 30.435422182994998 22.49955869373345 35 20.482494851426893 28.970285378052367 29.764048249485143 20.783171521035598 36 20.731979994115918 30.119446896145924 30.581935863489264 18.566637246248895 37 16.96498970285378 31.393939393939398 32.16416593115623 19.476904972050605 38 17.5204471903501 34.159458664313036 27.06913798175934 21.250956163577523 39 19.651073845248604 33.492203589290966 28.150044130626657 18.706678434833773 40 21.79523389232127 30.437187408061195 29.8699617534569 17.897616946160635 41 23.014416004707268 28.319505736981466 27.76051779935275 20.905560458958515 42 25.10856134157105 24.484848484848484 30.74257134451309 19.664018829067373 43 22.83083259782289 25.70520741394528 31.03206825536923 20.431891732862606 44 18.830832597822887 28.236540158870255 28.830832597822887 24.101794645483963 45 20.912032950867903 27.585172109443956 28.232421300382466 23.270373639305678 46 22.929096793174462 28.626066490144158 30.096498970285378 18.348337746396 47 18.3477493380406 29.0438364224772 33.74404236540159 18.864371874080614 48 20.179464548396588 25.297440423654017 32.637834657252135 21.885260370697264 49 21.515739923506914 24.38246543100912 33.73227419829362 20.36952044719035 50 19.593409826419535 24.141218005295677 32.310679611650485 23.954692556634306 51 18.689614592527214 23.742277140335393 29.029714621947633 28.538393645189764 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1421.0 1 1989.0 2 2557.0 3 4744.0 4 6931.0 5 4366.5 6 1802.0 7 1857.5 8 1913.0 9 2133.0 10 2353.0 11 2646.5 12 2940.0 13 2774.0 14 2608.0 15 2476.0 16 2344.0 17 2179.5 18 2015.0 19 1908.5 20 1802.0 21 1836.5 22 1871.0 23 1837.5 24 1804.0 25 1944.5 26 1688.0 27 1291.0 28 1595.5 29 1900.0 30 2056.5 31 2213.0 32 2363.5 33 2514.0 34 2714.5 35 2915.0 36 3291.0 37 3667.0 38 3936.5 39 4206.0 40 5049.0 41 5892.0 42 7363.5 43 8835.0 44 10346.0 45 11857.0 46 15145.0 47 18433.0 48 20011.0 49 21589.0 50 20756.0 51 19923.0 52 15666.0 53 11409.0 54 8924.0 55 6439.0 56 4998.0 57 3557.0 58 3127.0 59 2697.0 60 2543.5 61 2390.0 62 1999.0 63 1608.0 64 1334.5 65 1061.0 66 793.5 67 526.0 68 373.0 69 220.0 70 200.5 71 181.0 72 131.0 73 81.0 74 59.5 75 36.0 76 34.0 77 27.5 78 21.0 79 13.0 80 5.0 81 2.5 82 0.0 83 0.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 169950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.983818770226534 #Duplication Level Percentage of deduplicated Percentage of total 1 74.32962720732505 33.4363047955281 2 10.409417920209286 9.36510738452486 3 4.508829300196206 6.084730803177405 4 2.562459123610203 4.6107678729037955 5 1.6991497710922172 3.8217122683142097 6 1.2465663832570308 3.3645189761694616 7 1.0202746893394377 3.212709620476611 8 0.8031393067364291 2.8902618417181523 9 0.5977763243950295 2.4201235657546336 >10 2.712884238064094 18.224183583406884 >50 0.061478090255068674 1.9717563989408649 >100 0.034009156311314584 3.25213298028832 >500 0.009156311314584695 2.597234480729626 >1k 0.005232177894048397 4.7484554280670785 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4555 2.6802000588408355 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCC 1396 0.8214180641365106 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1072 0.6307737569873492 No Hit CCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 1047 0.6160635481023831 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 989 0.5819358634892615 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGCT 629 0.3701088555457488 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCG 621 0.36540158870255957 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGC 570 0.3353927625772286 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTC 551 0.32421300382465434 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 542 0.3189173286260665 No Hit TCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 512 0.30126507796410706 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCG 414 0.2436010591350397 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 383 0.22536040011768166 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 372 0.21888790820829657 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 348 0.20476610767872902 No Hit TTAGAAAGGGACGTACTTTTAGTTTTAGAAAACTTTTATATTTATGTGTCT 344 0.20241247425713446 No Hit ACTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 341 0.20064724919093851 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGC 310 0.18240659017358046 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 303 0.17828773168578993 No Hit ACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTG 230 0.13533392174168873 No Hit GTTCAGAAAAATAAAAAAAGAAAAGAAAGAAGAAGAAGAAGAAGAAGAAGA 206 0.12121212121212122 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGT 186 0.10944395410414828 No Hit CGCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTG 185 0.10885554574874964 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCAAAGGT 178 0.1047366872609591 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.40129449838187703 0.0 2 0.0 0.0 0.0 2.2218299499852896 0.0 3 0.0 0.0 0.0 3.01735804648426 0.0 4 0.0 0.0 0.0 4.022947925860548 0.0 5 0.0 0.0 0.0 6.80435422182995 0.0 6 0.0 0.0 0.0 8.21300382465431 0.0 7 0.0 0.0 0.0 9.857605177993527 0.0 8 0.0 0.0 0.0 12.254192409532216 0.0 9 0.0 0.0 0.0 13.102677258017064 0.0 10 0.0 0.0 0.0 15.978817299205648 0.0 11 0.0 0.0 0.0 20.258311268020005 0.0 12 0.0 0.0 0.0 23.10856134157105 0.0 13 0.0 0.0 0.0 24.132391879964697 0.0 14 0.0 0.0 0.0 24.4783759929391 0.0 15 0.0 0.0 0.0 25.255075022065313 0.0 16 0.0 0.0 0.0 27.06501912327155 0.0 17 0.0 0.0 0.0 29.055016181229774 0.0 18 0.0 0.0 0.0 31.320388349514563 0.0 19 0.0 0.0 0.0 32.81082671373934 0.0 20 0.0 0.0 0.0 34.00411885848779 0.0 21 0.0 0.0 0.0 35.65931156222418 0.0 22 0.0 0.0 0.0 37.19623418652545 0.0 23 0.0 0.0 0.0 38.68784936746102 0.0 24 0.0 0.0 0.0 39.62165342747867 0.0 25 0.0 0.0 0.0 40.33480435422183 0.0 26 0.0 0.0 0.0 41.03501029714622 0.0 27 0.0 0.0 0.0 41.532803765813476 0.0 28 0.0 0.0 0.0 42.0441306266549 0.0 29 0.0 0.0 0.0 42.55663430420712 0.0 30 0.0 0.0 0.0 43.046778464254196 0.0 31 0.0 0.0 0.0 43.4792586054722 0.0 32 5.884083553986466E-4 0.0 0.0 43.87525742865549 0.0 33 5.884083553986466E-4 0.0 0.0 44.25066195939982 0.0 34 5.884083553986466E-4 0.0 0.0 44.610179464548395 0.0 35 5.884083553986466E-4 0.0 0.0 44.97205060311857 0.0 36 5.884083553986466E-4 0.0 0.0 45.29214474845543 0.0 37 5.884083553986466E-4 0.0 0.0 45.63165636952045 0.0 38 5.884083553986466E-4 0.0 0.0 45.955280964989704 0.0 39 5.884083553986466E-4 0.0 0.0 46.270079435127975 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGTAAG 35 1.2037708E-7 45.000004 1 CGTTATT 115 0.0 45.000004 1 TAGGGTT 60 0.0 45.000004 5 TAGGGCG 30 2.1545584E-6 45.000004 5 CGTAAGG 30 2.1545584E-6 45.000004 2 TAAGGGT 65 0.0 45.000004 4 TGGGACC 65 0.0 45.000004 6 CGTGGGA 20 7.0163136E-4 45.0 4 TAATAGT 20 7.0163136E-4 45.0 14 GGGCTCA 25 3.8767426E-5 45.0 7 CCGATGC 20 7.0163136E-4 45.0 11 CCGATGA 25 3.8767426E-5 45.0 18 GCGAAGG 25 3.8767426E-5 45.0 2 GGCCGAT 20 7.0163136E-4 45.0 8 AGGGTCC 50 2.1827873E-11 45.0 6 TAACGCG 20 7.0163136E-4 45.0 1 ACGGGAC 25 3.8767426E-5 45.0 5 CATTAGG 25 3.8767426E-5 45.0 2 GCCGATG 20 7.0163136E-4 45.0 9 GCGGGTA 20 7.0163136E-4 45.0 5 >>END_MODULE