##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934811.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 228168 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.780183899582763 31.0 31.0 34.0 30.0 34.0 2 31.891842852634902 33.0 31.0 34.0 30.0 34.0 3 31.900362890501736 33.0 31.0 34.0 30.0 34.0 4 35.65854107499737 37.0 35.0 37.0 33.0 37.0 5 33.04774113810876 37.0 35.0 37.0 28.0 37.0 6 34.129645699659896 37.0 35.0 37.0 28.0 37.0 7 35.48174590652501 37.0 35.0 37.0 32.0 37.0 8 35.48560271378984 37.0 35.0 37.0 33.0 37.0 9 37.572722730619546 39.0 37.0 39.0 35.0 39.0 10 36.93032327057256 39.0 37.0 39.0 32.0 39.0 11 36.70894691630728 39.0 37.0 39.0 32.0 39.0 12 37.05624364503348 39.0 37.0 39.0 33.0 39.0 13 37.07152186108481 39.0 37.0 39.0 33.0 39.0 14 38.11024771221206 40.0 37.0 41.0 33.0 41.0 15 38.272623680796606 40.0 38.0 41.0 34.0 41.0 16 38.22263419936187 40.0 37.0 41.0 33.0 41.0 17 38.192336348655374 40.0 37.0 41.0 34.0 41.0 18 38.06922969040356 39.0 37.0 41.0 34.0 41.0 19 37.87569247221346 39.0 37.0 41.0 34.0 41.0 20 37.69277023947267 39.0 35.0 41.0 34.0 41.0 21 37.608674310157426 39.0 35.0 41.0 33.0 41.0 22 37.56016619333123 39.0 35.0 41.0 33.0 41.0 23 37.34755969285789 39.0 35.0 40.0 33.0 41.0 24 37.11250043827355 39.0 35.0 40.0 32.0 41.0 25 36.91383541951544 39.0 35.0 40.0 32.0 41.0 26 37.15314154482662 39.0 35.0 40.0 33.0 41.0 27 36.98531345324498 39.0 35.0 40.0 33.0 41.0 28 37.0380202307072 39.0 35.0 40.0 33.0 41.0 29 37.099759826093056 39.0 35.0 41.0 33.0 41.0 30 36.824212860699134 39.0 35.0 40.0 32.0 41.0 31 36.61778601732057 39.0 35.0 40.0 31.0 41.0 32 36.28324743171698 39.0 35.0 40.0 30.0 41.0 33 36.06528522842817 39.0 35.0 40.0 30.0 41.0 34 35.93921145822377 39.0 35.0 41.0 29.0 41.0 35 35.69128449212861 39.0 35.0 41.0 26.0 41.0 36 35.549476701377934 39.0 35.0 40.0 25.0 41.0 37 35.43871182637355 39.0 35.0 40.0 24.0 41.0 38 35.30068195364819 39.0 35.0 40.0 24.0 41.0 39 35.22071017846499 39.0 35.0 40.0 23.0 41.0 40 35.16800340100277 39.0 35.0 40.0 23.0 41.0 41 35.098217103187125 39.0 35.0 40.0 23.0 41.0 42 35.15744977385085 39.0 35.0 40.0 23.0 41.0 43 35.01853458854879 39.0 35.0 40.0 22.0 41.0 44 34.906424213737246 39.0 35.0 40.0 22.0 41.0 45 34.88431769573297 38.0 35.0 40.0 22.0 41.0 46 34.7525332211353 38.0 34.0 40.0 22.0 41.0 47 34.65157690824305 38.0 34.0 40.0 21.0 41.0 48 34.62751130745766 38.0 34.0 40.0 20.0 41.0 49 34.60173643981628 38.0 34.0 40.0 20.0 41.0 50 34.512578450965954 38.0 34.0 40.0 20.0 41.0 51 33.53774411836892 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 5.0 11 5.0 12 3.0 13 8.0 14 10.0 15 16.0 16 35.0 17 58.0 18 118.0 19 189.0 20 347.0 21 493.0 22 899.0 23 1267.0 24 1838.0 25 2933.0 26 3917.0 27 4433.0 28 4310.0 29 4156.0 30 4422.0 31 4930.0 32 6265.0 33 8487.0 34 13210.0 35 18595.0 36 23174.0 37 30712.0 38 47016.0 39 46299.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.07839837312857 22.633761088320885 25.431699449528416 17.856141089022124 2 37.12308474457417 23.147855965779602 24.461800077136147 15.267259212510082 3 27.307510255601137 22.798990217734303 35.900301532204345 13.993197994460221 4 23.795186003295818 24.858437642438904 35.87356684548227 15.472809508783003 5 18.673082991479962 33.014708460432665 32.49623084744574 15.815977700641632 6 21.833911854423057 32.29550156025385 33.49505627432418 12.375530310998913 7 69.48388906419831 6.467164545422671 19.701711019950213 4.347235370428807 8 68.67965709477227 5.4617650152519195 20.068545983661163 5.7900319063146455 9 62.873847340556075 8.533624346972406 22.469408506013114 6.1231198064584 10 29.254759650783633 30.43283896076575 28.68894849409207 11.623452894358541 11 18.914133445531363 23.345517338101747 39.87894884471091 17.86140037165597 12 18.41493986886855 21.424126082535675 43.34437782686442 16.816556221731354 13 18.75723151362154 23.360856912450476 43.405297850706496 14.476613723221485 14 15.529346797096878 26.430086602854036 40.81553942708881 17.225027172960274 15 13.851635636899125 25.841485221415798 43.68710774517022 16.61977139651485 16 14.38282318291785 26.788594369061393 40.73796500823954 18.090617439781216 17 14.841695592721152 25.255075207741662 38.64038778443953 21.262841415097647 18 14.45557659268609 25.711756249780866 42.16191578135409 17.670751376178956 19 15.683619087689774 26.403351916131975 39.7264296483293 18.186599347848954 20 16.008379790329933 28.70297324778234 39.193050734546475 16.095596227341257 21 15.750236667718523 27.74928999684443 40.066968198871 16.43350513656604 22 13.892395077311454 26.56595140422846 37.94572420321868 21.595929315241403 23 13.38969531222608 26.241628975141122 39.1132849479331 21.255390764699694 24 15.428543879948108 25.321254514217596 38.83191332702219 20.418288278812103 25 13.958574383787385 27.83037060411627 36.871953998807896 21.339101013288452 26 14.842572139826792 28.829634304547525 37.637617895585706 18.69017566003997 27 17.01377932050068 27.330300480347812 38.217892079520354 17.43802811963115 28 13.724974580133937 26.2644191998878 39.72555310122366 20.2850531187546 29 16.445338522492197 25.69729322253778 37.74236527470986 20.11500298026016 30 19.66445776796045 27.37544265628835 34.89358718137513 18.066512394376076 31 18.054679008449913 30.325900213877492 33.28994425160408 18.32947652606851 32 17.93765996984678 31.923407313909046 31.155113775814314 18.98381894042986 33 18.38995827635777 30.053294064023 31.222607902948706 20.334139756670524 34 18.877756740647243 27.12781809894464 33.154517723782476 20.839907436625644 35 19.829686897373865 29.291136355667753 29.958626976613722 20.92054977034466 36 22.122295852179096 28.11831632831948 30.819396234353636 18.939991585147787 37 19.621068686231197 28.744170961747486 34.34837488166614 17.286385470355174 38 16.618456575856385 32.835892850881805 30.65986466112689 19.885785912134917 39 19.712229585217912 30.386820237719576 29.525174432874024 20.37577574418849 40 22.490007362995687 28.59165176536587 30.620420041373027 18.29792083026542 41 21.09454437081449 29.434451807440134 27.526647032011496 21.94435678973388 42 21.506083236913152 26.273184670944218 31.0302058132604 21.190526278882228 43 21.001192104063673 26.853020581326042 31.794116615826933 20.35167069878335 44 19.399740542056733 27.320658462185758 30.862785316082885 22.416815679674627 45 21.711633533186074 26.59400091160899 30.027435924406575 21.66692963079836 46 23.372690298376636 27.095824129588724 31.21997826163178 18.31150731040286 47 18.608218505662492 28.166088145576946 33.567809684092424 19.657883664668137 48 18.08272851583044 26.73775463693419 32.70747869990534 22.472038147330036 49 19.98395918796676 23.8688159601697 34.30410925283125 21.84311559903229 50 18.976806563584727 23.882402440307143 33.33508642754461 23.805704568563517 51 18.243136636162827 23.9998597524631 30.188720591844604 27.56828301952947 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1316.0 1 2039.5 2 2763.0 3 5495.5 4 8228.0 5 5485.0 6 2742.0 7 2813.5 8 2885.0 9 3076.5 10 3268.0 11 3183.0 12 3098.0 13 3061.5 14 3025.0 15 3260.0 16 3495.0 17 3540.5 18 3586.0 19 3281.0 20 2976.0 21 2691.0 22 2406.0 23 2380.0 24 2354.0 25 2740.0 26 3104.5 27 3083.0 28 3247.0 29 3411.0 30 3700.5 31 3990.0 32 4391.5 33 4793.0 34 4952.5 35 5112.0 36 5755.0 37 6398.0 38 6619.0 39 6840.0 40 7837.5 41 8835.0 42 10642.0 43 12449.0 44 13756.0 45 15063.0 46 17574.5 47 20086.0 48 23215.0 49 26344.0 50 25383.5 51 24423.0 52 19479.0 53 14535.0 54 11616.0 55 8697.0 56 6913.0 57 5129.0 58 4618.5 59 4108.0 60 3766.5 61 3425.0 62 2933.0 63 2441.0 64 2066.5 65 1692.0 66 1268.0 67 844.0 68 675.0 69 506.0 70 415.5 71 325.0 72 251.5 73 178.0 74 140.0 75 81.5 76 61.0 77 36.5 78 12.0 79 7.5 80 3.0 81 5.5 82 8.0 83 7.0 84 6.0 85 3.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 228168.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.07710616646316 #Duplication Level Percentage of deduplicated Percentage of total 1 72.94659304418599 32.88221319134555 2 10.834407922024306 9.767675123037185 3 4.562075744284536 6.169355179936814 4 2.5966905689327113 4.682051858289338 5 1.8610229980276807 4.194476563016166 6 1.4732244901075153 3.9845218048566013 7 1.1513937903838702 3.6331050089978105 8 0.9185163943371205 3.3123248818537068 9 0.7416095367626172 3.0086650640439054 >10 2.8095207651889353 18.509282243482044 >50 0.06896369007397181 2.0949824119991343 >100 0.028984739306451922 2.88702092389042 >500 0.0029984213075639923 1.1439054503367316 >1k 0.00399789507675199 3.7304202949145875 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4841 2.1216822692051474 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCC 1338 0.5864100136741349 No Hit GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 1088 0.47684162546895276 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 1013 0.443971109007398 TruSeq Adapter, Index 14 (95% over 21bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 901 0.39488447109147645 No Hit TAAACAGGGAGATGGATATAAATATTTTTTTTATTTTTAAATATTGTACTA 834 0.36552014305248764 No Hit CTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGCT 804 0.3523719364678658 TruSeq Adapter, Index 15 (95% over 23bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 472 0.2068651169313839 No Hit TCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 452 0.1980996458749693 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCG 439 0.19240208968829983 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 403 0.17662424178675362 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 342 0.14988955506468918 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 325 0.1424389046667368 No Hit ACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 313 0.13717962203288805 TruSeq Adapter, Index 15 (95% over 22bp) GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 312 0.1367413484800673 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 300 0.13148206584621858 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.38524245292942044 0.0 2 0.0 0.0 0.0 1.781143718663441 0.0 3 0.0 0.0 0.0 2.403053890116055 0.0 4 0.0 0.0 0.0 3.229637810735949 0.0 5 0.0 0.0 0.0 5.335980505592371 0.0 6 0.0 0.0 0.0 6.5096770800462815 0.0 7 0.0 0.0 0.0 7.727201009782266 0.0 8 0.0 0.0 0.0 9.669629395883735 0.0 9 0.0 0.0 0.0 10.443620490165141 0.0 10 0.0 0.0 0.0 12.377283405210196 0.0 11 0.0 0.0 0.0 15.954472143332982 0.0 12 0.0 0.0 0.0 18.38294589951264 0.0 13 0.0 0.0 0.0 19.266067108446407 0.0 14 0.0 0.0 0.0 19.61624767715017 0.0 15 0.0 0.0 0.0 20.30170751376179 0.0 16 0.0 0.0 0.0 21.906226990638476 0.0 17 0.0 0.0 0.0 23.967865783107182 0.0 18 0.0 0.0 0.0 26.039146593737946 0.0 19 0.0 0.0 0.0 27.27463973913958 0.0 20 0.0 0.0 0.0 28.44658321938221 0.0 21 0.0 0.0 0.0 29.82451526945058 0.0 22 0.0 0.0 0.0 31.216033799656394 0.0 23 0.0 0.0 0.0 32.454594859927774 0.0 24 0.0 0.0 0.0 33.328074050699485 0.0 25 0.0 0.0 0.0 34.023614179025984 0.0 26 0.0 0.0 0.0 34.58811051505908 0.0 27 0.0 0.0 0.0 35.110532590021386 0.0 28 0.0 0.0 0.0 35.66319554012833 0.0 29 0.0 0.0 0.0 36.20709301917885 0.0 30 0.0 0.0 0.0 36.779478279162724 0.0 31 0.0 0.0 0.0 37.27911012937835 0.0 32 0.0 0.0 0.0 37.749377651554994 0.0 33 0.0 0.0 0.0 38.15916342344238 0.0 34 0.0 0.0 0.0 38.575523298622066 0.0 35 0.0 0.0 0.0 39.001086918411 0.0 36 0.0 0.0 0.0 39.36047123172399 0.0 37 0.0 0.0 0.0 39.71722590372006 0.0 38 0.0 0.0 0.0 40.089320150064864 0.0 39 0.0 0.0 0.0 40.472371235230185 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATGG 25 3.8809478E-5 45.000004 2 GGCCGGT 25 3.8809478E-5 45.000004 9 TTGACGG 25 3.8809478E-5 45.000004 2 GCGGGCA 25 3.8809478E-5 45.000004 5 TTGCACG 25 3.8809478E-5 45.000004 1 TCGCATG 20 7.021391E-4 45.0 1 CCGGGAT 35 1.2062083E-7 45.0 5 GCGAATG 20 7.021391E-4 45.0 1 ACGTTAG 20 7.021391E-4 45.0 1 AGGACGG 20 7.021391E-4 45.0 2 TCGGGCA 20 7.021391E-4 45.0 5 GTAATGG 35 1.2062083E-7 45.0 2 CAGGGTA 75 0.0 45.0 5 ATCCGGG 20 7.021391E-4 45.0 3 GGGACGA 20 7.021391E-4 45.0 7 GCGATTG 20 7.021391E-4 45.0 9 CAGTGCG 20 7.021391E-4 45.0 1 TAGATTG 20 7.021391E-4 45.0 1 CGTAAGG 35 1.2062083E-7 45.0 2 GGGTTAC 20 7.021391E-4 45.0 8 >>END_MODULE