##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934808.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 200778 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.559777465658588 31.0 31.0 34.0 30.0 34.0 2 31.659997609299825 31.0 31.0 34.0 30.0 34.0 3 31.701306916096385 31.0 31.0 34.0 30.0 34.0 4 35.50700773989182 37.0 35.0 37.0 33.0 37.0 5 32.94718544860493 37.0 35.0 37.0 28.0 37.0 6 33.972671308609506 37.0 35.0 37.0 27.0 37.0 7 35.32400462202034 37.0 35.0 37.0 32.0 37.0 8 35.30325533674008 37.0 35.0 37.0 33.0 37.0 9 37.318660411001204 39.0 37.0 39.0 34.0 39.0 10 36.74391616611382 39.0 37.0 39.0 32.0 39.0 11 36.57755829821993 39.0 35.0 39.0 32.0 39.0 12 36.931073125541644 39.0 37.0 39.0 33.0 39.0 13 36.820005179850384 39.0 37.0 39.0 33.0 39.0 14 37.6877546344719 39.0 37.0 41.0 33.0 41.0 15 37.88378208767893 39.0 37.0 41.0 33.0 41.0 16 37.8904312225443 39.0 37.0 41.0 33.0 41.0 17 37.894072059687815 39.0 37.0 41.0 33.0 41.0 18 37.848912729482315 39.0 37.0 40.0 33.0 41.0 19 37.70601858769387 39.0 36.0 40.0 33.0 41.0 20 37.53421191564813 39.0 35.0 40.0 33.0 41.0 21 37.44593033101236 39.0 35.0 40.0 33.0 41.0 22 37.393135702118755 39.0 35.0 40.0 33.0 41.0 23 37.174979330404724 39.0 35.0 40.0 32.0 41.0 24 36.88007152178027 39.0 35.0 40.0 32.0 41.0 25 36.72369482712249 38.0 35.0 40.0 31.0 41.0 26 37.052864357648744 39.0 35.0 40.0 32.0 41.0 27 36.96098676149777 39.0 35.0 40.0 32.0 41.0 28 37.066346910518085 39.0 35.0 40.0 32.0 41.0 29 37.20849395850143 39.0 35.0 40.0 33.0 41.0 30 36.95756507187043 39.0 35.0 40.0 32.0 41.0 31 36.885196585283246 39.0 35.0 40.0 32.0 41.0 32 36.77813306238731 39.0 35.0 40.0 31.0 41.0 33 36.69363675303071 39.0 35.0 40.0 31.0 41.0 34 36.67236948271225 39.0 35.0 41.0 31.0 41.0 35 36.547609797886224 39.0 35.0 41.0 31.0 41.0 36 36.38300511012163 39.0 35.0 41.0 30.0 41.0 37 36.318864616641264 39.0 35.0 41.0 30.0 41.0 38 36.198049587106155 39.0 35.0 40.0 30.0 41.0 39 36.15531084082917 39.0 35.0 40.0 30.0 41.0 40 36.03989978981761 39.0 35.0 40.0 29.0 41.0 41 35.94007311558039 39.0 35.0 40.0 29.0 41.0 42 35.9606929046011 39.0 35.0 40.0 29.0 41.0 43 35.849111954497005 39.0 35.0 40.0 28.0 41.0 44 35.73829304007411 39.0 35.0 40.0 27.0 41.0 45 35.785230453535746 39.0 35.0 40.0 27.0 41.0 46 35.71051609240056 39.0 35.0 40.0 27.0 41.0 47 35.66288637201287 39.0 35.0 40.0 27.0 41.0 48 35.63561246750142 39.0 35.0 40.0 27.0 41.0 49 35.65926047674546 39.0 35.0 40.0 27.0 41.0 50 35.54285330066043 39.0 35.0 40.0 27.0 41.0 51 34.586687784518226 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 2.0 11 2.0 12 2.0 13 6.0 14 7.0 15 13.0 16 26.0 17 35.0 18 80.0 19 155.0 20 234.0 21 387.0 22 639.0 23 932.0 24 1291.0 25 1761.0 26 2294.0 27 2756.0 28 3171.0 29 3248.0 30 3691.0 31 4446.0 32 5831.0 33 8050.0 34 12368.0 35 17074.0 36 20225.0 37 27604.0 38 44293.0 39 40144.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.9659823287412 23.320284094870953 26.157248304097063 15.556485272290788 2 31.857574036996084 24.010100708244927 27.0652163085597 17.067108946199287 3 27.16781719112652 23.82233113189692 34.859895008417254 14.149956668559305 4 25.38823974738268 26.249887935929234 32.92143561545588 15.440436701232208 5 18.817300700275926 33.48922690733048 30.121328033947943 17.572144358445644 6 20.75177559294345 33.72182211198438 31.353534749823186 14.172867545248982 7 67.16373307832532 7.75832013467611 18.948789209973206 6.129157577025372 8 64.32178824373189 7.251790534819552 18.78791501060873 9.638506210839832 9 58.868999591588725 9.94879917122394 22.352050523463728 8.830150713723615 10 28.033947942503662 31.278825369313374 27.843688053471993 12.843538634710974 11 18.4337925469922 22.74850830270249 38.40809252009683 20.409606630208486 12 17.742979808544764 20.617298708025782 43.3523593222365 18.28736216119296 13 18.29234278656028 24.807996892089772 42.08728047893693 14.812379842413012 14 13.218579724870255 28.453814660968828 38.86033330344958 19.467272310711333 15 10.955383557959538 26.607994899839625 44.86198687107153 17.574634671129306 16 11.041050314277461 27.336162328541974 39.32303340007371 22.299753957106855 17 11.346362649294244 27.39592983294982 35.71656257159649 25.541144946159438 18 12.211497275597925 26.678221717518852 41.32474673520007 19.785534271683154 19 13.510942433932005 26.460070326430184 38.15159031367978 21.877396925958024 20 13.707677135941188 30.074510155495126 38.19292950422855 18.024883204335136 21 14.751118150394962 28.264550897010626 38.73880604448694 18.245524908107463 22 10.963850621083983 28.063831694707588 35.09996115112213 25.872356533086293 23 11.672593610853779 26.770861349351026 36.530894819153495 25.025650220641705 24 15.826435167199593 25.777724651107192 35.650320254211124 22.745519927482093 25 12.010280010758152 28.78253593521202 33.44788771678172 25.759296337248106 26 11.56202372769925 29.00965245196187 35.40626961121238 24.022054209126498 27 15.204355058821188 26.917789797686996 37.92796023468707 19.94989490880475 28 9.842711850899999 25.976949665800035 38.78562392293976 25.3947145603602 29 12.269770592395583 22.67180667204574 35.972566715476795 29.08585602008188 30 14.973254041777487 25.876839095916882 36.53936188227794 22.61054498002769 31 13.308230981482035 27.134945063702197 32.70477841197741 26.85204554283836 32 12.335016784707488 26.289732938867804 33.36271902300052 28.01253125342418 33 16.220402633754695 23.88060444869458 35.291217165227266 24.607775752323462 34 12.76235444122364 21.138770183984303 35.34500791919433 30.753867455597728 35 13.536841685842074 20.18149398838518 34.82453256830927 31.45713175746347 36 18.09212164679397 21.079998804649914 38.031557242327345 22.79632230622877 37 15.05742661048521 22.122941756566956 39.841018438275114 22.97861319467272 38 14.58327107551624 25.018179282590726 35.03720527149389 25.36134437039915 39 19.684427576726534 20.266662682166373 34.24727808823676 25.801631652870334 40 18.172807777744573 19.931964657482393 35.349988544561654 26.545239020211376 41 16.97845381466097 21.63882497086334 32.32276444630388 29.059956768171812 42 20.212871928199306 20.090348544163206 35.35048660709839 24.346292920539103 43 22.207612387811412 18.607616372311707 36.08014822341093 23.104623016465947 44 17.060634133221768 20.244249868013426 34.196973772026816 28.49814222673799 45 18.083654583669524 17.63240992539023 32.90250923906006 31.381426251880185 46 19.65255157437568 18.762513821235395 36.76398808634412 24.820946518044806 47 14.966281166263236 19.130582035880426 40.51041448764307 25.392722310213273 48 16.10136568747572 18.055265019075794 38.82845730109872 27.01491199234976 49 20.580442080307606 15.085816175078943 40.21854984111805 24.115191903495404 50 18.75653707079461 15.503192580860453 37.37859725667155 28.36167309167339 51 17.42671009771987 15.619241151919036 32.31130900795904 34.64273974240206 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1693.0 1 1871.0 2 2049.0 3 3623.0 4 5197.0 5 3443.5 6 1690.0 7 1624.5 8 1559.0 9 1633.5 10 1708.0 11 1719.0 12 1730.0 13 1863.5 14 1997.0 15 2016.0 16 2035.0 17 1858.0 18 1681.0 19 1790.0 20 1899.0 21 2004.5 22 2110.0 23 2121.0 24 2132.0 25 2719.0 26 3378.5 27 3451.0 28 3226.0 29 3001.0 30 2939.0 31 2877.0 32 3035.0 33 3193.0 34 3322.0 35 3451.0 36 3881.0 37 4311.0 38 4541.5 39 4772.0 40 6013.5 41 7255.0 42 8620.5 43 9986.0 44 12307.0 45 14628.0 46 18821.0 47 23014.0 48 27122.0 49 31230.0 50 29271.5 51 27313.0 52 20541.5 53 13770.0 54 10054.0 55 6338.0 56 4717.0 57 3096.0 58 2532.5 59 1969.0 60 1901.5 61 1834.0 62 1665.0 63 1496.0 64 1292.5 65 1089.0 66 930.5 67 772.0 68 643.5 69 515.0 70 392.5 71 270.0 72 219.5 73 169.0 74 133.0 75 72.5 76 48.0 77 41.5 78 35.0 79 20.5 80 6.0 81 3.5 82 1.0 83 2.0 84 3.0 85 2.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 200778.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.73454262917252 #Duplication Level Percentage of deduplicated Percentage of total 1 70.86176118162032 28.865214316309558 2 11.509304770987699 9.376525316518743 3 5.148802973614066 6.2920240265367715 4 2.938155674565329 4.787377103069061 5 1.9966742474262098 4.066680612417695 6 1.481916220380016 3.621910767115919 7 1.0906512116988236 3.109902479355308 8 0.8387743623603061 2.733367201585831 9 0.7739710952974836 2.8374622717628424 >10 3.1680238671655294 20.095329169530526 >50 0.11371139314797153 3.10342766637779 >100 0.06602597021495121 4.673320782157408 >500 0.006113515760643631 1.9748179581428245 >1k 0.006113515760643631 4.462640329119724 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3039 1.5136120491288885 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 2083 1.0374642640129894 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 1652 0.8227993106814493 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGCT 1130 0.5628106665072866 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 1056 0.5259540387891104 TruSeq Adapter, Index 16 (95% over 21bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 963 0.47963422287302393 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 821 0.408909342657064 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCC 813 0.40492484236320714 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 723 0.36009921405731704 No Hit ACTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 645 0.3212503361922123 TruSeq Adapter, Index 13 (95% over 21bp) TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 456 0.22711651674984312 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 450 0.22412814152945043 No Hit ACCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTG 365 0.1817928259072209 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCG 329 0.1638625745848649 No Hit AGCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTG 318 0.15838388668081163 No Hit GCCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTG 294 0.14643038579924095 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 291 0.14493619818904463 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 254 0.12650788432995647 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 238 0.11853888374224267 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 231 0.11505244598511788 No Hit CGCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTG 225 0.11206407076472522 No Hit GACCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCT 215 0.1070834453974041 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 207 0.1030989451035472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5936905437846776 0.0 2 0.0 0.0 0.0 3.4635268804351074 0.0 3 0.0 0.0 0.0 4.623514528484196 0.0 4 0.0 0.0 0.0 6.151072328641584 0.0 5 0.0 0.0 0.0 9.822291286893982 0.0 6 0.0 0.0 0.0 11.839444560659036 0.0 7 0.0 0.0 0.0 14.079729850880076 0.0 8 0.0 0.0 0.0 17.36594646823855 0.0 9 0.0 0.0 0.0 18.561794618932353 0.0 10 0.0 0.0 0.0 21.488410084770244 0.0 11 0.0 0.0 0.0 26.28624650111068 0.0 12 4.980625367321121E-4 0.0 0.0 29.794599009851677 0.0 13 4.980625367321121E-4 0.0 0.0 31.117453107412167 0.0 14 4.980625367321121E-4 0.0 0.0 31.585631891940352 0.0 15 4.980625367321121E-4 0.0 0.0 32.52198946099672 0.0 16 4.980625367321121E-4 0.0 0.0 34.80211975415633 0.0 17 4.980625367321121E-4 0.0 0.0 37.82486128958352 0.0 18 4.980625367321121E-4 0.0 0.0 40.936756019085756 0.0 19 4.980625367321121E-4 0.0 0.0 42.67051170945024 0.0 20 4.980625367321121E-4 0.0 0.0 44.21550169839325 0.0 21 4.980625367321121E-4 0.0 0.0 45.96569345246989 0.0 22 4.980625367321121E-4 0.0 0.0 47.85932721712538 0.0 23 4.980625367321121E-4 0.0 0.0 49.42473777007441 0.0 24 4.980625367321121E-4 0.0 0.0 50.5025450995627 0.0 25 4.980625367321121E-4 0.0 0.0 51.332815348295135 0.0 26 4.980625367321121E-4 0.0 0.0 52.02811064957316 0.0 27 4.980625367321121E-4 0.0 0.0 52.602376754425286 0.0 28 4.980625367321121E-4 0.0 0.0 53.20154598611401 0.0 29 4.980625367321121E-4 0.0 0.0 53.75738377710705 0.0 30 4.980625367321121E-4 0.0 0.0 54.44022751496678 0.0 31 4.980625367321121E-4 0.0 0.0 54.94874936497027 0.0 32 4.980625367321121E-4 0.0 0.0 55.42589327515963 0.0 33 4.980625367321121E-4 0.0 0.0 55.81288786620048 0.0 34 4.980625367321121E-4 0.0 0.0 56.16103357937622 0.0 35 4.980625367321121E-4 0.0 0.0 56.606301487214736 0.0 36 4.980625367321121E-4 0.0 0.0 56.93801113667832 0.0 37 4.980625367321121E-4 0.0 0.0 57.2866549123908 0.0 38 4.980625367321121E-4 0.0 0.0 57.60342268575242 0.0 39 4.980625367321121E-4 0.0 0.0 57.92068852165078 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAATT 20 7.0193666E-4 45.0 5 TCGCCGC 20 7.0193666E-4 45.0 28 ATCCTAG 25 3.8792725E-5 45.0 14 TGTCACG 20 7.0193666E-4 45.0 1 ACTATGG 25 3.8792725E-5 45.0 2 AGGTAAG 20 7.0193666E-4 45.0 1 ACTATAT 35 1.2052442E-7 45.0 15 ACCGGGA 20 7.0193666E-4 45.0 4 ATAGGGT 20 7.0193666E-4 45.0 4 CGCGGGA 35 1.2052442E-7 45.0 4 ACGCAGT 20 7.0193666E-4 45.0 2 GACAATA 20 7.0193666E-4 45.0 9 CGCATGG 20 7.0193666E-4 45.0 2 ATGTGAG 20 7.0193666E-4 45.0 1 GGACTCC 20 7.0193666E-4 45.0 8 TAGCGGG 35 1.2052442E-7 45.0 3 TCGGGGT 35 1.2052442E-7 45.0 5 TGAACGG 25 3.8792725E-5 45.0 2 ATGCTAG 25 3.8792725E-5 45.0 1 TAAGTAG 20 7.0193666E-4 45.0 1 >>END_MODULE