##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934806.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 304917 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.624140339830184 31.0 31.0 34.0 30.0 34.0 2 31.718083937596134 31.0 31.0 34.0 30.0 34.0 3 31.74102132711525 33.0 31.0 34.0 30.0 34.0 4 35.56386492061774 37.0 35.0 37.0 33.0 37.0 5 33.08932266813592 37.0 35.0 37.0 28.0 37.0 6 34.06564409331064 37.0 35.0 37.0 28.0 37.0 7 35.343870627088684 37.0 35.0 37.0 32.0 37.0 8 35.29469330998272 37.0 35.0 37.0 33.0 37.0 9 37.279249763050274 39.0 37.0 39.0 34.0 39.0 10 36.80801988737919 39.0 37.0 39.0 32.0 39.0 11 36.605456566869016 39.0 35.0 39.0 32.0 39.0 12 36.869439880360886 39.0 37.0 39.0 33.0 39.0 13 36.785997500959276 39.0 37.0 39.0 33.0 39.0 14 37.59189877901199 39.0 37.0 41.0 32.0 41.0 15 37.76784502012023 39.0 37.0 41.0 33.0 41.0 16 37.77676548044222 40.0 37.0 41.0 33.0 41.0 17 37.78228501526645 39.0 37.0 41.0 33.0 41.0 18 37.7058150250724 39.0 37.0 40.0 33.0 41.0 19 37.52881275888193 39.0 36.0 40.0 33.0 41.0 20 37.35364049888986 39.0 35.0 40.0 33.0 41.0 21 37.27168376968159 39.0 35.0 40.0 33.0 41.0 22 37.270480163454316 39.0 35.0 40.0 33.0 41.0 23 37.04431041890088 39.0 35.0 40.0 32.0 41.0 24 36.74256273018559 38.0 35.0 40.0 31.0 41.0 25 36.55107455471489 38.0 35.0 40.0 31.0 41.0 26 36.80354325931319 38.0 35.0 40.0 32.0 41.0 27 36.724764444094625 38.0 35.0 40.0 32.0 41.0 28 36.79793517580194 39.0 35.0 40.0 32.0 41.0 29 36.83194115119852 39.0 35.0 40.0 32.0 41.0 30 36.58448036678834 39.0 35.0 40.0 31.0 41.0 31 36.44400935336501 39.0 35.0 40.0 31.0 41.0 32 36.256623933726225 39.0 35.0 40.0 30.0 41.0 33 36.09040492986616 39.0 35.0 40.0 30.0 41.0 34 35.952669086997446 39.0 35.0 40.0 29.0 41.0 35 35.73172371497817 39.0 35.0 40.0 27.0 41.0 36 35.543042860844096 39.0 35.0 40.0 26.0 41.0 37 35.580223470649386 39.0 35.0 40.0 26.0 41.0 38 35.53667063495968 39.0 35.0 40.0 26.0 41.0 39 35.47873355700076 39.0 35.0 40.0 25.0 41.0 40 35.38865986481567 39.0 35.0 40.0 25.0 41.0 41 35.21715089680143 38.0 35.0 40.0 24.0 41.0 42 35.23238127096882 38.0 35.0 40.0 24.0 41.0 43 35.15098207053067 38.0 35.0 40.0 24.0 41.0 44 35.098862969267046 38.0 35.0 40.0 23.0 41.0 45 35.121318260379056 38.0 35.0 40.0 23.0 41.0 46 35.020274369746524 38.0 35.0 40.0 23.0 41.0 47 34.91936822151602 38.0 35.0 40.0 23.0 41.0 48 34.8982149240613 38.0 34.0 40.0 23.0 41.0 49 34.902986714417366 38.0 34.0 40.0 23.0 41.0 50 34.82272552858647 38.0 34.0 40.0 23.0 41.0 51 33.8018214792878 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 7.0 10 7.0 11 10.0 12 14.0 13 15.0 14 16.0 15 24.0 16 47.0 17 73.0 18 159.0 19 271.0 20 451.0 21 687.0 22 1157.0 23 1763.0 24 2517.0 25 3636.0 26 4783.0 27 5102.0 28 5278.0 29 5526.0 30 6114.0 31 7403.0 32 9592.0 33 13431.0 34 20136.0 35 24948.0 36 31425.0 37 43313.0 38 64949.0 39 52046.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.38060849345887 21.190028761925376 23.08103516694707 17.348327577668677 2 35.44505553970424 22.505140743218647 24.892675711751068 17.15712800532604 3 27.728529403083463 23.40309002121889 33.4094196125503 15.458960963147348 4 24.682454569604186 24.244958464106624 34.020733511086625 17.051853455202565 5 19.331490208810923 31.206853012459128 31.92606512591951 17.535591652810435 6 20.73187129612321 31.029755638419637 34.289659153146594 13.948713912310563 7 64.57822948540094 7.046507738171372 21.820692188366014 6.554570588061669 8 61.526907322320504 6.7267485906000655 22.71667371776582 9.029670369313617 9 55.26454740142399 9.436338413404304 25.545968247096752 9.753145938074951 10 31.74667204517951 21.779697425856874 31.594499486745576 14.879131042218047 11 21.547503091005094 22.62582932404556 35.63658307014696 20.19008451480239 12 20.476391936166234 19.917879291741684 41.31419369861307 18.29153507347901 13 20.51377915957457 21.627524867422938 42.447288934365744 15.411407038636742 14 15.679676764496566 24.41812034094524 40.43461007421692 19.467592820341274 15 13.397088387987552 23.567069071255457 44.71741490307198 18.31842763768501 16 14.535102995241328 24.80084744373059 39.061777467310776 21.602272093717307 17 15.27071301370537 24.580787558581516 36.874952856023114 23.27354657169 18 16.278856213330183 23.31421337609907 41.454887723544445 18.952042687026307 19 15.237917203698057 25.47676908798132 37.94114463936087 21.34416906895975 20 14.910287061724995 28.16143409518 38.75120114654152 18.17707769655349 21 14.998179832544595 26.717762538658064 40.29949133698679 17.98456629181056 22 13.087495941518512 25.8188293863576 36.414827641620505 24.678847030503384 23 12.914006106579823 24.467969972156357 38.286156560637814 24.331867360626006 24 16.647153159712317 24.484695835260087 36.03538011983589 22.832770885191707 25 13.692578636153446 27.00308608572169 34.498896420993255 24.805438857131612 26 12.950409455687941 27.91644939442537 36.59159705755993 22.541544092326767 27 15.660983152792399 25.213090775522517 36.22985927317926 22.896066798505824 28 11.584463968883336 24.65228242439746 35.44079208440329 28.322461522315912 29 14.049397049033017 25.278354437437073 34.1735619857207 26.498686527809205 30 16.64452949491173 25.492183118684757 32.41078719782761 25.452500188575904 31 13.846718943187819 28.131261949973275 28.936727043752892 29.085292063086023 32 14.374075568105418 27.12574241514904 30.087859975009597 28.412322041735948 33 15.098862969267046 24.91530482065611 30.352522161768615 29.633310048308225 34 13.306899910467438 23.93667785003788 32.110377578160616 30.646044661334066 35 12.86874788876973 26.616751443835536 31.216035839261174 29.298464828133557 36 14.965711980637353 28.004670123345043 30.153451595024222 26.876166300993386 37 13.52761571181666 25.273435065935978 31.03270726132029 30.16624196092707 38 14.192386780664904 25.48693578908359 30.697862041145623 29.622815389105888 39 17.05152549710249 23.4358858312262 32.768589485007396 26.743999186663913 40 17.70317824194781 22.128644844334687 34.76487044015257 25.403306473564935 41 14.889297743320313 26.340938681674032 30.38728572037637 28.38247785462929 42 16.22638291731848 26.20516402824375 32.33699662531115 25.231456429126613 43 18.170190576451954 24.072124545368084 31.39870850100191 26.35897637717805 44 17.28044025095354 21.587513979214016 30.213139969237528 30.918905800594914 45 18.411239780005705 19.60500726427192 30.214779759737898 31.76897319598448 46 19.795222962314334 20.974888248277402 32.91223513283943 26.317653656568833 47 13.295093418864806 23.618230534866864 36.67686616357894 26.409809882689387 48 15.114604958070558 21.59407314121548 34.64516573362587 28.646156167088094 49 18.835617561500342 18.709353692972186 37.00416834745193 25.45086039807554 50 17.398177208879794 17.61036609962711 35.63559919584674 29.355857495646354 51 16.016161775171604 18.527008989331524 31.45544525231456 34.00138398318231 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1185.0 1 2479.0 2 3773.0 3 6651.0 4 9529.0 5 6320.0 6 3111.0 7 3021.5 8 2932.0 9 3023.0 10 3114.0 11 3091.5 12 3069.0 13 3175.0 14 3281.0 15 3025.0 16 2769.0 17 2769.5 18 2770.0 19 2678.5 20 2587.0 21 2769.5 22 2952.0 23 3010.5 24 3069.0 25 2782.5 26 2682.0 27 2868.0 28 3200.0 29 3532.0 30 3831.0 31 4130.0 32 4233.0 33 4336.0 34 4727.5 35 5119.0 36 5297.0 37 5475.0 38 6297.0 39 7119.0 40 7811.5 41 8504.0 42 10874.0 43 13244.0 44 15816.5 45 18389.0 46 24712.5 47 31036.0 48 36634.5 49 42233.0 50 41735.0 51 41237.0 52 32723.5 53 24210.0 54 19178.5 55 14147.0 56 11355.5 57 8564.0 58 7309.5 59 6055.0 60 5420.0 61 4785.0 62 4417.0 63 4049.0 64 3572.5 65 3096.0 66 2617.5 67 2139.0 68 1812.5 69 1486.0 70 1218.0 71 950.0 72 757.5 73 565.0 74 539.5 75 373.5 76 233.0 77 190.5 78 148.0 79 107.0 80 66.0 81 43.0 82 20.0 83 13.0 84 6.0 85 8.0 86 10.0 87 7.5 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 1.5 94 3.0 95 4.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 304917.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.065582443329596 #Duplication Level Percentage of deduplicated Percentage of total 1 73.10453245248202 32.944983342183924 2 10.87316335911774 9.800108795602222 3 4.820546624602879 6.517222239988657 4 2.88146889213072 5.194202956648262 5 1.9242124165443582 4.335787664812912 6 1.4220363683623858 3.845093831750887 7 1.1140948708582754 3.514513397664797 8 0.8521057887544512 3.072051493884169 9 0.63734745926372 2.5850191023446243 >10 2.233508117541574 15.461911872217218 >50 0.07471835473193007 2.306549930013192 >100 0.053474900935597015 4.638519116447026 >500 0.003662664447643631 1.0055461695749512 >1k 0.004395197337172358 2.9895686512379376 >5k 7.325328895287262E-4 1.7889214356292384 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5419 1.7772049442963167 No Hit GCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 2525 0.8280942026846649 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 1672 0.5483459433222811 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCC 1471 0.48242636520758103 No Hit CTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGCT 1309 0.4292971529957333 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 1051 0.34468396317686456 TruSeq Adapter, Index 16 (95% over 21bp) ATAAGAGGAGAATTTTTGCATACATTTTTACTCTTTAAATAAAGACACTTA 1028 0.33714092687518243 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 712 0.23350616725207185 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 682 0.22366742424987784 No Hit ACTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 590 0.19349527904314945 TruSeq Adapter, Index 13 (95% over 21bp) CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 535 0.17545758353912705 No Hit GAATCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTC 527 0.17283391873854195 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCG 499 0.1636510919364942 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCG 468 0.15348439083422702 No Hit ACCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTG 455 0.14922093553327628 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 445 0.14594135453254492 No Hit GCCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTG 366 0.12003266462676729 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 364 0.11937674842662101 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGC 340 0.11150575402486579 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGC 339 0.11117779592479266 No Hit GGCAATGTTTTTCATTATATAATTATTCTATTTTTGTAAATTATATACTAC 318 0.10429067582325682 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4571735915019497 0.0 2 0.0 0.0 0.0 2.493793392956116 0.0 3 0.0 0.0 0.0 3.3543554475480213 0.0 4 0.0 0.0 0.0 4.584854239022422 0.0 5 0.0 0.0 0.0 7.9595430887749785 0.0 6 0.0 0.0 0.0 9.84825378709616 0.0 7 0.0 0.0 0.0 12.022943948681117 0.0 8 0.0 0.0 0.0 14.955545279535087 0.0 9 0.0 0.0 0.0 16.085688892387108 0.0 10 0.0 0.0 0.0 19.04649461984737 0.0 11 0.0 0.0 0.0 23.59363367736138 0.0 12 0.0 0.0 0.0 26.918800854002892 0.0 13 0.0 0.0 0.0 28.19521377948753 0.0 14 0.0 0.0 0.0 28.764549041214494 0.0 15 0.0 0.0 0.0 29.835988154153426 0.0 16 0.0 0.0 0.0 32.009694441438164 0.0 17 0.0 0.0 0.0 34.305073183850034 0.0 18 0.0 0.0 0.0 36.64702197647229 0.0 19 0.0 0.0 0.0 38.11856997150044 0.0 20 0.0 0.0 0.0 39.634720268138544 0.0 21 0.0 0.0 0.0 41.312225950012625 0.0 22 0.0 0.0 0.0 42.91922064037099 0.0 23 0.0 0.0 0.0 44.29697261877823 0.0 24 0.0 0.0 0.0 45.31856210050604 0.0 25 0.0 0.0 0.0 46.046629082668396 0.0 26 0.0 0.0 0.0 46.749443291125125 0.0 27 0.0 0.0 0.0 47.38305834046642 0.0 28 0.0 0.0 0.0 47.89073747937964 0.0 29 0.0 0.0 0.0 48.389561749590875 0.0 30 0.0 0.0 0.0 48.911015128707156 0.0 31 0.0 0.0 0.0 49.308500345995796 0.0 32 0.0 0.0 0.0 49.72631896548897 0.0 33 0.0 0.0 0.0 50.05263727506174 0.0 34 0.0 0.0 0.0 50.429789090145846 0.0 35 0.0 0.0 0.0 50.786607503025415 0.0 36 0.0 0.0 0.0 51.05815680988597 0.0 37 0.0 0.0 0.0 51.35167930945143 0.0 38 0.0 0.0 0.0 51.645529767116955 0.0 39 0.0 0.0 0.0 52.02136974980077 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGGTCA 50 2.1827873E-11 45.000004 6 TACGGGA 50 2.1827873E-11 45.000004 4 ACTAAGG 25 3.8840415E-5 45.000004 2 CAAGCGG 25 3.8840415E-5 45.000004 2 TGCACGG 25 3.8840415E-5 45.000004 2 CAACGAG 20 7.025125E-4 45.0 14 CCGATGG 20 7.025125E-4 45.0 11 GCGCGAC 20 7.025125E-4 45.0 9 GGGTATC 20 7.025125E-4 45.0 7 TAGCGAG 20 7.025125E-4 45.0 1 ATGTAGG 40 6.7866495E-9 45.0 2 ACAGGTC 20 7.025125E-4 45.0 23 ACAATAC 20 7.025125E-4 45.0 17 TAGGCCG 35 1.208009E-7 45.0 1 GGCGATT 20 7.025125E-4 45.0 8 GGTAGCG 20 7.025125E-4 45.0 1 GACTAAG 20 7.025125E-4 45.0 1 CGTTATT 150 0.0 43.5 1 ATAGGGA 135 0.0 43.333336 4 CGTTTTT 2035 0.0 42.7887 1 >>END_MODULE