##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934795.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1222061 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0411035128361 33.0 31.0 34.0 30.0 34.0 2 32.22156504462543 34.0 31.0 34.0 30.0 34.0 3 32.234854070296 34.0 31.0 34.0 30.0 34.0 4 35.82364055476773 37.0 35.0 37.0 35.0 37.0 5 35.69566576463859 37.0 35.0 37.0 33.0 37.0 6 35.61087130675146 37.0 35.0 37.0 33.0 37.0 7 35.97887012186789 37.0 35.0 37.0 35.0 37.0 8 35.82647101904078 37.0 35.0 37.0 35.0 37.0 9 37.55999495933509 39.0 37.0 39.0 35.0 39.0 10 37.282999784789794 39.0 37.0 39.0 34.0 39.0 11 37.084612797560844 39.0 37.0 39.0 33.0 39.0 12 36.71914004292748 39.0 35.0 39.0 33.0 39.0 13 36.41155228748811 39.0 35.0 39.0 32.0 39.0 14 36.891554513236244 39.0 35.0 41.0 30.0 41.0 15 37.16193708824682 39.0 35.0 41.0 31.0 41.0 16 37.49551290811179 39.0 35.0 41.0 33.0 41.0 17 37.60292734978041 39.0 35.0 41.0 33.0 41.0 18 37.623400141236814 39.0 35.0 41.0 33.0 41.0 19 37.59189598555228 39.0 35.0 41.0 33.0 41.0 20 37.44058111665457 39.0 35.0 41.0 33.0 41.0 21 37.40461155376041 39.0 35.0 41.0 33.0 41.0 22 37.44903077669609 39.0 35.0 41.0 33.0 41.0 23 37.3097324928952 39.0 35.0 41.0 33.0 41.0 24 36.9944225370092 39.0 35.0 41.0 32.0 41.0 25 36.91006668243238 39.0 35.0 40.0 32.0 41.0 26 37.09864728520098 39.0 35.0 41.0 33.0 41.0 27 37.137451403816996 39.0 35.0 41.0 33.0 41.0 28 37.07793391655572 39.0 35.0 41.0 33.0 41.0 29 37.057529861438994 39.0 35.0 41.0 32.0 41.0 30 36.885540083514655 39.0 35.0 41.0 32.0 41.0 31 36.70485761349065 39.0 35.0 41.0 31.0 41.0 32 36.64560443382123 38.0 35.0 40.0 31.0 41.0 33 36.53295621086018 38.0 35.0 40.0 31.0 41.0 34 36.38969331318158 38.0 35.0 40.0 31.0 41.0 35 36.32199292833991 38.0 35.0 40.0 31.0 41.0 36 36.238960248301844 38.0 35.0 40.0 30.0 41.0 37 36.0617947876579 38.0 35.0 40.0 30.0 41.0 38 36.02173377597354 38.0 35.0 40.0 30.0 41.0 39 36.09513436726972 38.0 35.0 40.0 30.0 41.0 40 35.974527458121976 38.0 35.0 40.0 30.0 41.0 41 35.85735409279897 38.0 35.0 40.0 30.0 41.0 42 35.81003648754031 38.0 35.0 40.0 30.0 41.0 43 35.756117738803546 38.0 35.0 40.0 30.0 41.0 44 35.70896051833746 38.0 35.0 40.0 30.0 41.0 45 35.73584542833787 38.0 35.0 40.0 30.0 41.0 46 35.736934572005815 38.0 35.0 40.0 30.0 41.0 47 35.587042708997345 38.0 35.0 40.0 29.0 41.0 48 35.517398067690564 37.0 34.0 40.0 29.0 41.0 49 35.53913675340265 37.0 34.0 40.0 29.0 41.0 50 35.39322750664656 37.0 34.0 40.0 29.0 41.0 51 34.44146732446253 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 14.0 10 14.0 11 20.0 12 25.0 13 24.0 14 32.0 15 75.0 16 126.0 17 265.0 18 437.0 19 728.0 20 1231.0 21 1973.0 22 2858.0 23 4354.0 24 6098.0 25 8489.0 26 11283.0 27 13431.0 28 15367.0 29 18360.0 30 22622.0 31 29597.0 32 40279.0 33 61535.0 34 111912.0 35 107305.0 36 95054.0 37 146424.0 38 244699.0 39 277214.0 40 208.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.32125974071671 21.461940115918924 25.052595574198016 12.164204569166351 2 32.91136858143742 23.94225820151367 24.70056732028925 18.445805896759655 3 30.79797162334777 24.038980050913988 27.753606407536118 17.40944191820212 4 29.011235936667646 24.544437634455235 27.843372793993098 18.60095363488402 5 24.23954287060957 28.49857740325565 27.63773657779767 19.62414314833711 6 26.560949085192963 30.623512246933664 27.218690392705437 15.596848275167932 7 77.74161846258085 5.493260974697662 10.930387271993787 5.834733290727713 8 77.30514270564235 4.522196518831711 10.987503897104972 7.185156878420964 9 72.60226780823544 5.704543390223565 13.602103331994067 8.091085469546938 10 44.924353203318 20.611409741412253 20.333436710606097 14.130800344663646 11 34.21146734901122 21.755706139055253 24.453607471312807 19.57921904062072 12 31.09893859635485 18.51323297282214 31.68467040515981 18.703158025663203 13 27.562208433130586 21.836962312028614 33.22231868949259 17.37851056534821 14 19.15567226185927 25.558134986715064 35.255605080270136 20.03058767115553 15 17.462303436571496 22.76220254144433 40.75753992640302 19.017954095581153 16 24.750073850650665 23.05572307765324 30.93822648787581 21.255976583820285 17 24.579296778147736 22.686428909849834 27.2959369458644 25.438337366138025 18 25.497908860523328 23.110139346562896 31.645801641652916 19.74615015126086 19 24.918232395927863 24.969620992732768 27.97421732630368 22.13792928503569 20 21.57142728554467 29.917573672672642 29.570046012433092 18.9409530293496 21 21.338460191430705 25.16388298129144 34.53542826421921 18.962228563058638 22 18.795297452418495 22.3493753585132 32.74378283899085 26.111544350077452 23 17.89444225779237 25.030747237658353 33.83014432176463 23.244666182784655 24 22.071075011803828 25.699208141001144 29.28372642609493 22.945990421100092 25 22.513524283976004 25.123541296220075 26.697685303761432 25.66524911604249 26 17.44618312833811 25.646428451607573 27.57988349190425 29.327504928150066 27 19.631507756159472 26.179298742043155 30.448480067688926 23.740713434108446 28 16.041997903541642 26.734017369018403 29.36130029515712 27.86268443228284 29 18.98080374056614 28.041071599535538 27.587411757678215 25.390712902220102 30 24.831493681575633 26.40948365097978 26.80389931435501 21.955123353089576 31 22.278347807515335 27.141362010570667 26.67501867746373 23.90527150445027 32 25.170920273210584 27.123686951797005 24.36711424388799 23.33827853110442 33 26.867971402409534 26.370205742593868 24.26294595768951 22.498876897307092 34 19.216798506784848 25.2184629081527 29.24960374318467 26.31513484187778 35 19.57095431406452 27.95891530782833 26.952009760560237 25.518120617546913 36 27.695098689836268 26.227741495719116 23.974335160028836 22.10282465441578 37 19.847945397161027 30.260518910267166 27.266805830478187 22.624729862093627 38 23.075607518773612 28.139430028451933 26.130119527584956 22.654842925189495 39 24.159923277152288 23.397440880610706 25.644791872091492 26.797843970145518 40 24.95448263220903 20.84904108714704 29.112049234858162 25.084427045785766 41 21.058523265205256 21.909053639711928 26.797189338339084 30.235233756743728 42 21.81552312036797 21.69294331461359 31.30465664152608 25.186876923492363 43 22.988132343639148 23.137633882433036 29.40532428413966 24.468909489788153 44 22.504032122782743 23.904698701619644 26.980077099261003 26.611192076336614 45 20.63514014439541 22.612782831626244 25.623189022479238 31.128888001499107 46 23.287135421226925 22.477519534622246 27.91620058245865 26.319144461692172 47 18.13526493358351 23.575664389911797 32.922251835219356 25.366818841285337 48 19.819959887436063 25.539232493304343 29.013199832086944 25.62760778717265 49 24.381925288508512 20.660425297918845 30.330073539700553 24.62757587387209 50 20.761811398939987 22.18080766835698 29.13725255940579 27.920128373297242 51 19.617351343345383 22.54339186014446 25.343415754205395 32.49584104230476 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 834.0 1 1258.5 2 1683.0 3 5355.0 4 9027.0 5 5921.5 6 2816.0 7 2857.0 8 2898.0 9 2955.0 10 3012.0 11 2989.5 12 2967.0 13 3103.5 14 3240.0 15 3193.5 16 3147.0 17 2855.5 18 2564.0 19 2670.0 20 2776.0 21 2917.0 22 3058.0 23 3236.0 24 3414.0 25 3993.5 26 5579.5 27 6586.0 28 7466.0 29 8346.0 30 9501.5 31 10657.0 32 12227.5 33 13798.0 34 17767.5 35 21737.0 36 23060.5 37 24384.0 38 27374.5 39 30365.0 40 36196.5 41 42028.0 42 49904.5 43 57781.0 44 69089.0 45 80397.0 46 98854.5 47 117312.0 48 138309.0 49 159306.0 50 157721.5 51 156137.0 52 130595.0 53 105053.0 54 91208.5 55 77364.0 56 72496.0 57 67628.0 58 63411.0 59 59194.0 60 48944.0 61 38694.0 62 34020.5 63 29347.0 64 26164.0 65 22981.0 66 19165.0 67 15349.0 68 13314.0 69 11279.0 70 9656.0 71 8033.0 72 6335.5 73 4638.0 74 4306.5 75 2789.0 76 1603.0 77 1245.5 78 888.0 79 846.5 80 805.0 81 457.5 82 110.0 83 124.5 84 139.0 85 113.5 86 88.0 87 61.5 88 35.0 89 22.0 90 9.0 91 6.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1222061.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.695927398249726 #Duplication Level Percentage of deduplicated Percentage of total 1 67.2308871009487 16.603291067649533 2 12.348302620948393 6.099055700371167 3 5.6086581874647035 4.155330461976817 4 3.178379152738654 3.1397208320057715 5 1.9923711036505907 2.460172606306283 6 1.375445463328416 2.038074078156631 7 1.0280009984226492 1.7771206615661783 8 0.7670958065362844 1.5155313876577519 9 0.5921169228017763 1.3160588883108937 >10 4.319520048283021 21.62699643819001 >50 1.1925433682994444 21.483777137016137 >100 0.35365510104338954 12.441310716350747 >500 0.007346942608939959 1.2484691265897814 >1k 0.004675327114779974 2.4037442967093257 >5k 0.0010018558103099943 1.6913466011430331 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGC 8336 0.6821263423020618 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGC 6101 0.4992385813801439 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6071 0.4967837121060242 No Hit CTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGCT 4504 0.3685577070211716 TruSeq Adapter, Index 13 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3851 0.31512338582116606 No Hit TCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGC 3073 0.2514604426456617 TruSeq Adapter, Index 16 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2279 0.18648823585729354 No Hit ACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGC 2257 0.18468799838960576 TruSeq Adapter, Index 13 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTG 2078 0.17004061172069151 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGC 1620 0.13256294080246403 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTC 1582 0.12945343972191242 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCG 1545 0.12642576761716479 No Hit ACCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTG 1543 0.1262621096655568 No Hit GCCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTG 1392 0.11390593431915429 No Hit AGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTG 1281 0.10482291800491138 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.454869274119704E-4 0.0 0.0 0.39400651849621254 0.0 2 2.454869274119704E-4 0.0 0.0 2.118715841516913 0.0 3 2.454869274119704E-4 0.0 0.0 3.0335637910055224 0.0 4 2.454869274119704E-4 0.0 0.0 4.028113162927219 0.0 5 2.454869274119704E-4 0.0 0.0 6.671352739347708 0.0 6 2.454869274119704E-4 0.0 0.0 7.914171223858711 0.0 7 2.454869274119704E-4 0.0 0.0 9.367372005161771 0.0 8 2.454869274119704E-4 0.0 0.0 11.507690696290938 0.0 9 2.454869274119704E-4 0.0 0.0 12.245624400091321 0.0 10 2.454869274119704E-4 0.0 0.0 14.004292748070677 0.0 11 2.454869274119704E-4 0.0 0.0 16.50858672357599 0.0 12 2.454869274119704E-4 0.0 0.0 18.537945323514947 0.0 13 2.454869274119704E-4 0.0 0.0 19.290117269105224 0.0 14 2.454869274119704E-4 0.0 0.0 19.605322483902196 0.0 15 2.454869274119704E-4 0.0 0.0 20.163968901716036 0.0 16 2.454869274119704E-4 0.0 0.0 21.25900425592503 0.0 17 2.454869274119704E-4 0.0 0.0 22.527271551911074 0.0 18 2.454869274119704E-4 0.0 0.0 24.084558790436812 0.0 19 2.454869274119704E-4 0.0 0.0 24.97600365284548 0.0 20 2.454869274119704E-4 0.0 0.0 25.900343763527353 0.0 21 2.454869274119704E-4 0.0 0.0 26.97263066246284 0.0 22 2.454869274119704E-4 0.0 0.0 28.074866966542587 0.0 23 2.454869274119704E-4 0.0 0.0 29.06172441473871 0.0 24 2.454869274119704E-4 0.0 0.0 29.81561476882087 0.0 25 2.454869274119704E-4 0.0 0.0 30.460508927132114 0.0 26 2.454869274119704E-4 0.0 0.0 31.10393016387889 0.0 27 2.454869274119704E-4 0.0 0.0 31.976554361852642 0.0 28 2.454869274119704E-4 0.0 0.0 32.69779495458901 0.0 29 2.454869274119704E-4 0.0 0.0 33.47713412014621 0.0 30 2.454869274119704E-4 0.0 0.0 34.41227565563421 0.0 31 2.454869274119704E-4 0.0 0.0 35.106267199427855 0.0 32 2.454869274119704E-4 0.0 0.0 35.70280043303894 0.0 33 2.454869274119704E-4 0.0 0.0 36.36471501831742 0.0 34 2.454869274119704E-4 0.0 0.0 37.10543090729514 0.0 35 2.454869274119704E-4 0.0 0.0 37.87912387352186 0.0 36 2.454869274119704E-4 0.0 0.0 38.48924071711641 0.0 37 2.454869274119704E-4 0.0 0.0 39.19002406590178 0.0 38 2.454869274119704E-4 0.0 0.0 40.079259545963744 0.0 39 2.454869274119704E-4 0.0 0.0 41.72696780275289 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGACG 35 1.2120108E-7 45.000004 1 TAGCGAT 35 1.2120108E-7 45.000004 12 TCCGTTG 35 1.2120108E-7 45.000004 16 GACGATT 35 1.2120108E-7 45.000004 18 ATGCACG 35 1.2120108E-7 45.000004 1 CTAGACG 25 3.8909515E-5 45.0 1 ACACGTA 25 3.8909515E-5 45.0 40 TCCGCGA 25 3.8909515E-5 45.0 45 CGAAATC 20 7.0334616E-4 45.0 34 ACCGACA 25 3.8909515E-5 45.0 12 ACCGAAC 25 3.8909515E-5 45.0 11 CGACATA 20 7.0334616E-4 45.0 33 ACCTCGT 25 3.8909515E-5 45.0 37 CTGCGAA 25 3.8909515E-5 45.0 35 CATACCG 20 7.0334616E-4 45.0 29 CGTAATT 25 3.8909515E-5 45.0 36 CGGTCTA 80 0.0 45.0 31 ACCCGTG 20 7.0334616E-4 45.0 20 CGGTATC 20 7.0334616E-4 45.0 45 CGCAATA 25 3.8909515E-5 45.0 9 >>END_MODULE