##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934794.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 907748 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.955572471655127 33.0 31.0 34.0 30.0 34.0 2 32.13444370023399 33.0 31.0 34.0 30.0 34.0 3 32.149558027117656 34.0 31.0 34.0 30.0 34.0 4 35.761094488778824 37.0 35.0 37.0 35.0 37.0 5 35.64424487853457 37.0 35.0 37.0 33.0 37.0 6 35.55369331576605 37.0 35.0 37.0 33.0 37.0 7 35.937987194683984 37.0 35.0 37.0 35.0 37.0 8 35.77428757760965 37.0 35.0 37.0 35.0 37.0 9 37.482496243450825 39.0 37.0 39.0 35.0 39.0 10 37.19124580830803 39.0 37.0 39.0 34.0 39.0 11 37.02692156854105 39.0 37.0 39.0 33.0 39.0 12 36.903971146177135 39.0 35.0 39.0 33.0 39.0 13 36.77278385631254 39.0 35.0 39.0 33.0 39.0 14 37.770896768706734 40.0 36.0 41.0 33.0 41.0 15 37.8793751129168 40.0 36.0 41.0 33.0 41.0 16 38.00782816376351 40.0 36.0 41.0 33.0 41.0 17 38.00901571801866 40.0 36.0 41.0 33.0 41.0 18 37.9790448450451 39.0 36.0 41.0 33.0 41.0 19 37.96493410065349 40.0 36.0 41.0 34.0 41.0 20 37.89825259873886 40.0 36.0 41.0 34.0 41.0 21 37.811902642583625 39.0 36.0 41.0 33.0 41.0 22 37.753873321670774 39.0 36.0 41.0 33.0 41.0 23 37.56508193904035 39.0 35.0 41.0 33.0 41.0 24 37.25983753200227 39.0 35.0 41.0 32.0 41.0 25 37.21555101195486 39.0 35.0 41.0 32.0 41.0 26 37.4260455544931 39.0 35.0 41.0 33.0 41.0 27 37.51822091593702 39.0 35.0 41.0 33.0 41.0 28 37.51666762141035 39.0 36.0 41.0 33.0 41.0 29 37.53703891388359 39.0 36.0 41.0 33.0 41.0 30 37.41294720561213 39.0 36.0 41.0 33.0 41.0 31 37.302293147437396 39.0 35.0 41.0 33.0 41.0 32 37.188416829340305 39.0 35.0 41.0 32.0 41.0 33 37.11165764066679 39.0 35.0 41.0 32.0 41.0 34 37.0463476647704 39.0 35.0 41.0 32.0 41.0 35 36.981222762264416 39.0 35.0 41.0 32.0 41.0 36 36.957350498155876 39.0 35.0 41.0 32.0 41.0 37 36.811143621357466 39.0 35.0 41.0 31.0 41.0 38 36.72659923238608 39.0 35.0 41.0 31.0 41.0 39 36.773408479005184 39.0 35.0 41.0 31.0 41.0 40 36.71943755315352 39.0 35.0 41.0 31.0 41.0 41 36.668716427907306 39.0 35.0 41.0 31.0 41.0 42 36.62179371367384 39.0 35.0 41.0 31.0 41.0 43 36.53532257851298 39.0 35.0 41.0 31.0 41.0 44 36.4655895689112 39.0 35.0 41.0 31.0 41.0 45 36.433771266915485 39.0 35.0 40.0 30.0 41.0 46 36.392140770345954 39.0 35.0 40.0 30.0 41.0 47 36.26566073403632 39.0 35.0 40.0 30.0 41.0 48 36.26751917933171 39.0 35.0 40.0 30.0 41.0 49 36.30908247663449 39.0 35.0 40.0 30.0 41.0 50 36.19942869606984 39.0 35.0 40.0 30.0 41.0 51 35.333801892155094 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 5.0 10 11.0 11 6.0 12 18.0 13 16.0 14 15.0 15 23.0 16 63.0 17 106.0 18 185.0 19 428.0 20 714.0 21 1137.0 22 1702.0 23 2562.0 24 3831.0 25 5436.0 26 7207.0 27 8535.0 28 9637.0 29 11239.0 30 13990.0 31 17760.0 32 23742.0 33 33367.0 34 61033.0 35 81756.0 36 71603.0 37 107928.0 38 196977.0 39 246595.0 40 116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.29829864676099 22.114617713286066 24.86659293107779 12.72049070887515 2 31.297122108779092 24.904709236484134 25.54827991909649 18.249888735640287 3 30.07288366374809 24.212666951620935 28.707306433062918 17.007142951568056 4 28.15891635123404 25.032828494251707 27.786786641226417 19.02146851328783 5 24.18920228962223 28.142061453178634 27.623415309094597 20.04532094810454 6 24.19812547094568 31.991918461951997 27.56712215284418 16.242833914258142 7 74.9266316202294 5.58062369732569 12.732388283973084 6.7603563984718225 8 73.76055909789942 4.49893582800513 12.75970864160538 8.980796432490076 9 68.73416410721919 6.382057575450456 15.863984277574833 9.019794039755528 10 37.7463789509864 25.807382665673735 21.95003459109797 14.496203792241898 11 25.784909468266527 24.111207075091325 29.535509855158036 20.56837360148411 12 24.0635066119672 20.464159656644796 34.66237325777639 20.809960473611618 13 21.154549500522172 25.378408985753754 34.99858991702543 18.468451596698642 14 16.392875555770985 30.513093942371672 31.31827335339764 21.775757148459704 15 14.18730749062515 27.055195935435826 39.99799503827053 18.75950153566849 16 15.956741298245769 27.28411409333868 33.846177573511596 22.91296703490396 17 16.287449820875395 27.44351956710453 29.327522616408956 26.94150799561112 18 17.431710122192502 26.083009822109222 34.451411625252824 22.033868430445455 19 18.75696779282356 28.19890542309099 29.620996135491346 23.423130648594103 20 20.732405910010268 28.324490938013636 30.73132631523286 20.211776836743237 21 19.753059219078423 28.35908203598356 32.2184130397423 19.669445705195717 22 17.106179247985125 26.2477031070297 29.21130093373932 27.43481671124585 23 17.632536783336345 26.925093748485263 30.3642640909151 25.07810537726329 24 21.16677756381727 23.948056068424275 30.17863988684084 24.706526480917613 25 17.193758620233808 27.05189105346418 28.015704799129278 27.73864552717274 26 15.856933862701982 27.68664871748547 29.97186443814803 26.484552981664518 27 19.67506400454752 27.517659086001846 30.97368432648709 21.833592582963554 28 16.798384573692257 26.493476162987967 31.390540105844355 25.317599157475424 29 17.690482380572583 25.27871171294236 29.943993266853795 27.086812639631262 30 19.957411087658688 25.087248884051522 28.909014396065867 26.046325632223922 31 20.13367145947994 27.064780093153608 24.68603621269339 28.115512234673055 32 18.71962262654393 28.28362056429758 27.17373103548562 25.82302577367287 33 19.638489977394606 24.18281285114371 29.64390998382811 26.534787187633572 34 18.17145287017983 22.584131278724932 30.020997016793206 29.223418834302027 35 15.6800125144864 23.602916227851782 31.077788108594017 29.6392831490678 36 20.30409320648462 21.961711840731127 31.91392324742109 25.82027170536316 37 19.383683577380506 23.86433239180918 34.19913896808365 22.55284506272666 38 18.198773227812122 26.81107532046339 29.496952898822137 25.493198552902346 39 19.545512631258894 23.064661117402625 31.223863891740876 26.1659623595976 40 20.510428004247874 20.641852143987098 31.938048885814123 26.909670965950905 41 16.240079845948436 22.317427303612895 31.131767847464275 30.310725002974394 42 20.119460467001854 20.061184381568452 34.244526013827624 25.574829137602066 43 22.71654688305565 21.085477467314718 32.49690442721989 23.701071222409745 44 20.057769336864418 22.957582941521217 28.99108563169514 27.993562089919227 45 19.831384921806492 21.52822148878323 27.25525145745295 31.385142131957327 46 22.614536192864097 21.546949153289237 29.714303969824226 26.124210684022437 47 16.37458854219453 21.39228067701609 35.49355107364599 26.739579707143392 48 18.01733520756862 19.638710302859383 33.581456527582546 28.762497961989453 49 19.76616858423263 17.824660588621512 36.83357055041708 25.575600276728782 50 18.99436848112031 17.883707813181633 34.31536065075329 28.806563054944768 51 17.05252999731203 18.619374540070595 29.467539449274465 34.86055601334291 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1151.0 1 1164.5 2 1178.0 3 3810.5 4 6443.0 5 4321.0 6 2199.0 7 2201.5 8 2204.0 9 2337.5 10 2471.0 11 2581.5 12 2692.0 13 2694.0 14 2696.0 15 2553.0 16 2410.0 17 2333.5 18 2257.0 19 2378.0 20 2499.0 21 2443.5 22 2388.0 23 2851.5 24 3315.0 25 4155.0 26 5726.0 27 6457.0 28 6921.0 29 7385.0 30 10456.5 31 13528.0 32 14936.0 33 16344.0 34 16932.0 35 17520.0 36 19666.5 37 21813.0 38 23276.0 39 24739.0 40 29825.0 41 34911.0 42 41189.0 43 47467.0 44 59858.5 45 72250.0 46 89094.0 47 105938.0 48 123864.0 49 141790.0 50 137683.0 51 133576.0 52 103893.0 53 74210.0 54 59522.5 55 44835.0 56 37353.5 57 29872.0 58 25963.0 59 22054.0 60 19682.0 61 17310.0 62 16649.5 63 15989.0 64 12989.0 65 9989.0 66 7437.0 67 4885.0 68 3524.0 69 2163.0 70 1914.5 71 1666.0 72 1300.0 73 934.0 74 867.5 75 526.0 76 251.0 77 163.0 78 75.0 79 47.0 80 19.0 81 35.0 82 51.0 83 29.5 84 8.0 85 7.5 86 7.0 87 5.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 4.5 96 9.0 97 4.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 907748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.46956052489964 #Duplication Level Percentage of deduplicated Percentage of total 1 64.59386570535973 15.159896407091795 2 12.493630430383618 5.864400311232325 3 6.254546005896858 4.4037433812349684 4 3.6883371058798886 3.462546037707249 5 2.3881740692192452 2.8024697930768467 6 1.681169956770735 2.3673792031844205 7 1.246582892223103 2.0479726846834194 8 0.906333969738132 1.701700796683332 9 0.6786963601077063 1.4335834771419205 >10 4.516599165902972 21.6406727320586 >50 1.2046367007263217 20.259070459900936 >100 0.32802091687963014 11.425672712739036 >500 0.010886697097015141 1.7729894361291094 >1k 0.00710001984587944 3.0126378770918114 >5k 0.001420003969175888 2.6452646900442573 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 9706 1.0692394805606842 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 7988 0.8799799063176125 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 6118 0.6739755967515214 TruSeq Adapter, Index 16 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4023 0.4431846723980664 No Hit TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 3928 0.4327192128211794 TruSeq Adapter, Index 13 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 2965 0.326632501531262 TruSeq Adapter, Index 16 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 2266 0.24962875159185147 TruSeq Adapter, Index 16 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1525 0.16799816689213307 TruSeq Adapter, Index 16 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1506 0.16590507497675566 No Hit ACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1498 0.16502377311764937 TruSeq Adapter, Index 16 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 1443 0.15896482283629376 No Hit GGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 1363 0.15015180424523106 No Hit AAAACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 1222 0.13461885897848302 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 1114 0.12272128388054834 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 1107 0.12195014475383036 No Hit GGTTGGAGGGAAATGACAGAAATACTGAAGAAAAAATAAGTCAAAATCATA 1089 0.11996721557084125 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCC 1054 0.11611151993725131 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 1016 0.11192533610649652 No Hit GGCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 939 0.10344280571259865 No Hit AGCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 926 0.10201069019155096 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 919 0.10123955106483297 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1016273238828398E-4 0.0 0.0 0.711430925763538 0.0 2 2.2032546477656796E-4 0.0 0.0 3.5754416423941446 0.0 3 2.2032546477656796E-4 0.0 0.0 4.974398180992963 0.0 4 2.2032546477656796E-4 0.0 0.0 6.544767931187951 0.0 5 2.2032546477656796E-4 0.0 0.0 10.335798040865967 0.0 6 2.2032546477656796E-4 0.0 0.0 12.147314012258908 0.0 7 2.2032546477656796E-4 0.0 0.0 14.138395237444753 0.0 8 2.2032546477656796E-4 0.0 0.0 17.119619101336493 0.0 9 2.2032546477656796E-4 0.0 0.0 18.092356028325042 0.0 10 2.2032546477656796E-4 0.0 0.0 20.351132693214417 0.0 11 2.2032546477656796E-4 0.0 0.0 23.497490492956196 0.0 12 2.2032546477656796E-4 0.0 0.0 26.044122377576155 0.0 13 2.2032546477656796E-4 0.0 0.0 26.95924419552563 0.0 14 2.2032546477656796E-4 0.0 0.0 27.309231196323207 0.0 15 3.304881971648519E-4 0.0 0.0 27.950157973358245 0.0 16 3.304881971648519E-4 0.0 0.0 29.30449860533981 0.0 17 3.304881971648519E-4 0.0 0.0 31.0741527384252 0.0 18 3.304881971648519E-4 0.0 0.0 33.161406028986015 0.0 19 3.304881971648519E-4 0.0 0.0 34.3106236532606 0.0 20 3.304881971648519E-4 0.0 0.0 35.328637463260726 0.0 21 3.304881971648519E-4 0.0 0.0 36.605313368908554 0.0 22 4.406509295531359E-4 0.0 0.0 37.810273335771605 0.0 23 4.406509295531359E-4 0.0 0.0 38.95244054517333 0.0 24 4.406509295531359E-4 0.0 0.0 39.811048881407615 0.0 25 4.406509295531359E-4 0.0 0.0 40.57458677959081 0.0 26 4.406509295531359E-4 0.0 0.0 41.28403477617136 0.0 27 4.406509295531359E-4 0.0 0.0 41.95371402635974 0.0 28 5.508136619414199E-4 0.0 0.0 42.62130018463274 0.0 29 5.508136619414199E-4 0.0 0.0 43.340552664395844 0.0 30 5.508136619414199E-4 0.0 0.0 44.08415110801676 0.0 31 5.508136619414199E-4 0.0 0.0 44.86839959988895 0.0 32 5.508136619414199E-4 0.0 0.0 45.54975609971049 0.0 33 5.508136619414199E-4 0.0 0.0 46.189801574886424 0.0 34 6.609763943297038E-4 0.0 0.0 46.82544054076682 0.0 35 6.609763943297038E-4 0.0 0.0 47.48234091399816 0.0 36 6.609763943297038E-4 0.0 0.0 48.1015656327527 0.0 37 6.609763943297038E-4 0.0 0.0 48.74744973274521 0.0 38 6.609763943297038E-4 0.0 0.0 49.352793947218835 0.0 39 6.609763943297038E-4 0.0 0.0 50.031616704195436 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCCG 30 2.1649957E-6 45.000004 1 ACAACGT 20 7.032501E-4 45.000004 25 AATCCGA 20 7.032501E-4 45.000004 35 ACGCCCA 20 7.032501E-4 45.000004 16 TCACCGT 20 7.032501E-4 45.000004 36 GGTCGTT 40 6.8121153E-9 45.000004 8 ATCTAGC 20 7.032501E-4 45.000004 40 GATCGGA 30 2.1649957E-6 45.000004 1 CTCCGAT 20 7.032501E-4 45.000004 19 CGCGGTA 20 7.032501E-4 45.000004 32 TTTACGG 30 2.1649957E-6 45.000004 2 TTAGCGC 20 7.032501E-4 45.000004 1 TAGACCG 20 7.032501E-4 45.000004 1 TAGCGGA 20 7.032501E-4 45.000004 3 TTGTCGT 65 0.0 45.000004 28 CCGGACG 20 7.032501E-4 45.000004 17 CCAGCGA 30 2.1649957E-6 45.000004 10 TTCGTCA 30 2.1649957E-6 45.000004 19 TACGGTG 20 7.032501E-4 45.000004 14 GGTCACG 20 7.032501E-4 45.000004 30 >>END_MODULE