##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934793.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 859394 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12628782607279 33.0 31.0 34.0 30.0 34.0 2 32.302779633090296 34.0 31.0 34.0 30.0 34.0 3 32.309873003535046 34.0 31.0 34.0 30.0 34.0 4 35.89314563518014 37.0 35.0 37.0 35.0 37.0 5 35.77925840766866 37.0 35.0 37.0 35.0 37.0 6 35.70870171306758 37.0 35.0 37.0 33.0 37.0 7 36.02284865847329 37.0 35.0 37.0 35.0 37.0 8 35.85726919201205 37.0 35.0 37.0 35.0 37.0 9 37.557883811150646 39.0 38.0 39.0 35.0 39.0 10 37.34909482728527 39.0 37.0 39.0 34.0 39.0 11 37.228308552305464 39.0 37.0 39.0 34.0 39.0 12 37.047646364764006 39.0 37.0 39.0 33.0 39.0 13 36.88667945086887 39.0 35.0 39.0 33.0 39.0 14 37.98818120675732 40.0 37.0 41.0 33.0 41.0 15 38.05574160396745 40.0 37.0 41.0 33.0 41.0 16 38.17338845744792 40.0 37.0 41.0 34.0 41.0 17 38.18139991668548 40.0 37.0 41.0 34.0 41.0 18 38.1537490371122 40.0 37.0 41.0 34.0 41.0 19 38.13506726833094 40.0 37.0 41.0 34.0 41.0 20 38.063480778315885 40.0 36.0 41.0 34.0 41.0 21 37.97963797745854 40.0 36.0 41.0 34.0 41.0 22 37.91245459009488 40.0 36.0 41.0 34.0 41.0 23 37.7560455390659 39.0 35.0 41.0 33.0 41.0 24 37.49453684805805 39.0 35.0 41.0 33.0 41.0 25 37.43190201467546 39.0 35.0 41.0 33.0 41.0 26 37.634840364256675 39.0 35.0 41.0 33.0 41.0 27 37.71830615526755 39.0 35.0 41.0 33.0 41.0 28 37.65119258454213 39.0 36.0 41.0 33.0 41.0 29 37.643915363616685 39.0 36.0 41.0 33.0 41.0 30 37.52061452604975 39.0 36.0 41.0 33.0 41.0 31 37.395286678752704 39.0 35.0 41.0 33.0 41.0 32 37.26475632829645 39.0 35.0 41.0 33.0 41.0 33 37.05220771846208 39.0 35.0 41.0 32.0 41.0 34 36.99490222179815 39.0 35.0 41.0 32.0 41.0 35 36.941205081720376 39.0 35.0 41.0 32.0 41.0 36 36.78053605214838 39.0 35.0 41.0 31.0 41.0 37 36.68393542426407 39.0 35.0 41.0 31.0 41.0 38 36.59491804690282 39.0 35.0 40.0 31.0 41.0 39 36.625536133601116 39.0 35.0 40.0 31.0 41.0 40 36.670107075450844 39.0 35.0 41.0 31.0 41.0 41 36.60600143822275 39.0 35.0 41.0 31.0 41.0 42 36.42936185265431 39.0 35.0 40.0 31.0 41.0 43 36.35631968573204 39.0 35.0 40.0 31.0 41.0 44 36.33840822719265 39.0 35.0 40.0 31.0 41.0 45 36.366212703370046 39.0 35.0 40.0 31.0 41.0 46 36.349549799044446 39.0 35.0 40.0 31.0 41.0 47 36.17295559429086 38.0 35.0 40.0 30.0 41.0 48 36.1233683269839 38.0 35.0 40.0 30.0 41.0 49 36.08242319587989 38.0 35.0 40.0 30.0 41.0 50 36.013708496917594 38.0 35.0 40.0 30.0 41.0 51 35.078148090398585 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 13.0 10 8.0 11 12.0 12 20.0 13 14.0 14 19.0 15 19.0 16 37.0 17 94.0 18 164.0 19 335.0 20 603.0 21 933.0 22 1477.0 23 2289.0 24 3080.0 25 4714.0 26 6315.0 27 7634.0 28 8613.0 29 9901.0 30 12263.0 31 15903.0 32 21575.0 33 30904.0 34 57917.0 35 81543.0 36 69766.0 37 106341.0 38 188856.0 39 227890.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.873801771946276 20.948249580518365 23.97619718080415 14.201751466731208 2 32.064338359355546 23.831909461783535 25.371366334882488 18.73238584397843 3 31.410505542277466 23.0543848339644 27.848460659487966 17.686648964270173 4 28.630290646664974 25.873697046988926 26.81622166317196 18.679790643174144 5 23.496091431869434 28.48158120722276 27.1061934339779 20.916133926929906 6 25.05986776728718 32.113675450375496 26.435953706914404 16.390503075422913 7 75.82145092937581 5.921498171967689 11.772946983572146 6.484103915084351 8 74.66156384615206 4.836198530592487 12.078860220108588 8.42337740314687 9 68.95230825442114 6.6444494608991915 15.466712590499817 8.936529694179853 10 38.616280774592326 24.32644398262031 22.109532996506843 14.947742246280518 11 27.789000155923826 24.30386993625741 26.93933166859438 20.967798239224383 12 25.8333197578759 20.644430843128998 33.137071005848306 20.3851783931468 13 22.18505132686521 26.261412111324955 32.76622829575258 18.787308266057245 14 16.98510811106431 28.93108399639746 31.30880597258068 22.775001919957553 15 16.06853201209224 25.99959971794078 37.68364684882604 20.248221421140943 16 17.556091850769263 27.01764266448218 32.22142579538605 23.204839689362505 17 18.166987435332338 26.04498053279404 29.095153096251547 26.692878935622076 18 18.963129833347683 25.349374093838218 33.87305473391716 21.814441338896945 19 20.66328133545266 26.3098183138351 29.826366020707617 23.200534330004633 20 22.4836338163869 27.07396141932571 29.476817385273808 20.965587379013584 21 20.52946611216741 26.889994577574434 31.847557697633448 20.73298161262471 22 19.313725718355027 25.361824727656927 28.718957777224418 26.60549177676363 23 18.759963416081565 25.46503699118216 29.857783507913716 25.91721608482256 24 21.932780540706588 23.058806554385995 30.917483715269135 24.09092918963828 25 17.837801986050636 26.298182207462467 29.337533191993426 26.526482614493467 26 18.54004100563886 26.611891635268574 30.975198802877372 23.87286855621519 27 21.9580308915352 26.184846531393053 30.317526070696328 21.53959650637542 28 17.009078490191925 24.752441836922294 34.84024789561016 23.398231777275615 29 18.231916908891616 24.49004763821949 33.273678894662986 24.00435655822591 30 24.865661151927988 24.749416449265414 29.52964530820555 20.855277090601053 31 24.683556087196326 26.29282959853106 27.994028350209565 21.02958596406305 32 25.431525004828988 27.098397242708234 27.297258300616477 20.1728194518463 33 26.503326762811934 23.962815658475623 28.39826668559473 21.13559089311771 34 22.602554823515174 23.236257176568607 31.94972271158514 22.21146528833108 35 24.21078108527637 23.265231081436454 29.288428823100933 23.235559010186247 36 27.972385192356477 21.58811906994929 31.496147285180022 18.943348452514215 37 24.63096088639204 23.339818523285015 33.197113314731084 18.83210727559187 38 22.464899685126962 27.110382432272047 28.481232124031585 21.943485758569413 39 24.81341503431488 23.883806496205466 30.780410382199552 20.522368087280107 40 27.88499803349802 20.67131024884977 30.091436523876126 21.352255193776077 41 23.860301561332754 21.734734010244427 28.903157341103146 25.501807087319666 42 23.60814713623786 20.814550718296847 32.357451878882095 23.219850266583197 43 24.714159046956343 21.54785814189999 31.256792577095023 22.481190234048643 44 21.40659581053626 22.94198004640479 30.56816780196278 25.083256341096167 45 23.452921477226976 22.442791083018964 27.985766714685 26.11852072506906 46 27.18601712369414 21.693309471557864 29.599345585377602 21.52132781937039 47 22.05798504527609 21.850978712907 34.01338617677107 22.077650065045834 48 22.472579515332896 20.1121953376449 32.76297018596826 24.652254961053952 49 22.899391897080967 18.60857767217365 35.96976474120136 22.522265689544028 50 22.683309401741226 19.673281405269293 32.68605552284517 24.95735367014431 51 21.423468164776573 19.233552945447606 29.121916140908592 30.221062748867222 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 855.0 1 1004.5 2 1154.0 3 4133.5 4 7113.0 5 4639.5 6 2166.0 7 2163.0 8 2160.0 9 2263.0 10 2366.0 11 2434.0 12 2502.0 13 2395.0 14 2288.0 15 2247.0 16 2206.0 17 2130.0 18 2054.0 19 2050.5 20 2047.0 21 2294.5 22 2542.0 23 3025.5 24 3509.0 25 3641.0 26 4565.5 27 5358.0 28 6324.5 29 7291.0 30 8125.5 31 8960.0 32 10847.0 33 12734.0 34 14091.5 35 15449.0 36 18373.5 37 21298.0 38 23132.5 39 24967.0 40 29999.5 41 35032.0 42 41589.0 43 48146.0 44 56366.5 45 64587.0 46 77061.0 47 89535.0 48 105430.5 49 121326.0 50 118970.5 51 116615.0 52 93124.0 53 69633.0 54 57801.0 55 45969.0 56 38939.5 57 31910.0 58 30295.0 59 28680.0 60 25366.5 61 22053.0 62 20091.0 63 18129.0 64 15397.5 65 12666.0 66 10004.5 67 7343.0 68 6558.0 69 5773.0 70 4790.5 71 3808.0 72 2969.0 73 2130.0 74 1810.0 75 1177.5 76 865.0 77 664.5 78 464.0 79 342.0 80 220.0 81 158.0 82 96.0 83 61.5 84 27.0 85 38.0 86 49.0 87 45.5 88 42.0 89 27.0 90 12.0 91 6.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 859394.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.860180126104385 #Duplication Level Percentage of deduplicated Percentage of total 1 64.54944342961852 15.401613472704835 2 13.09310936978486 6.248078959477037 3 6.36758549835731 4.557952108775268 4 3.550658185102444 3.388773754510848 5 2.3087178388088945 2.7543211747165324 6 1.6089803734024823 2.303433691724995 7 1.1454777926106738 1.9131914523500184 8 0.8271434766023557 1.5788633873491529 9 0.6176297255826784 1.3263080853275215 >10 4.260370102552208 21.759422792950566 >50 1.3841236856492891 23.549814880467267 >100 0.2720044058770959 9.378450505408708 >500 0.009345540165759173 1.457156605162675 >1k 0.004426834815359608 2.527960154252901 >5k 9.837410700799128E-4 1.854658974821662 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 8458 0.9841818769970468 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 7345 0.8546720130696748 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 4995 0.5812235133128693 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4536 0.5278137850624975 No Hit TCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 2809 0.3268582280071772 No Hit ACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 2207 0.25680886764394445 No Hit CGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 2125 0.2472672604183878 No Hit GCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 1467 0.17070168048648235 No Hit ACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 1212 0.1410296092362758 No Hit GGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 1161 0.13509519498623448 No Hit AGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 1028 0.11961917351063656 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCC 977 0.11368475926059526 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3272212745260033E-4 0.0 0.0 0.6084520022248235 0.0 2 2.3272212745260033E-4 0.0 0.0 3.1809623990858675 0.0 3 2.3272212745260033E-4 0.0 0.0 4.384833964398169 0.0 4 2.3272212745260033E-4 0.0 0.0 5.640835286259853 0.0 5 2.3272212745260033E-4 0.0 0.0 8.69345143205561 0.0 6 2.3272212745260033E-4 0.0 0.0 10.185782074345411 0.0 7 2.3272212745260033E-4 0.0 0.0 11.830196626925485 0.0 8 2.3272212745260033E-4 0.0 0.0 14.153345264221068 0.0 9 2.3272212745260033E-4 0.0 0.0 14.998941114320091 0.0 10 2.3272212745260033E-4 0.0 0.0 16.815919124406268 0.0 11 2.3272212745260033E-4 0.0 0.0 19.565647421322467 0.0 12 2.3272212745260033E-4 0.0 0.0 21.651186766488944 0.0 13 2.3272212745260033E-4 0.0 0.0 22.464201518744602 0.0 14 2.3272212745260033E-4 0.0 0.0 22.766973006560438 0.0 15 2.3272212745260033E-4 0.0 0.0 23.361694403265556 0.0 16 2.3272212745260033E-4 0.0 0.0 24.699730275054282 0.0 17 2.3272212745260033E-4 0.0 0.0 26.283171630241775 0.0 18 2.3272212745260033E-4 0.0 0.0 28.14425048348022 0.0 19 2.3272212745260033E-4 0.0 0.0 29.131574109197878 0.0 20 2.3272212745260033E-4 0.0 0.0 30.051990123272912 0.0 21 2.3272212745260033E-4 0.0 0.0 31.226189617335006 0.0 22 2.3272212745260033E-4 0.0 0.0 32.32556894742109 0.0 23 2.3272212745260033E-4 0.0 0.0 33.432046302394475 0.0 24 2.3272212745260033E-4 0.0 0.0 34.281016623341564 0.0 25 2.3272212745260033E-4 0.0 0.0 35.051908670528306 0.0 26 2.3272212745260033E-4 0.0 0.0 35.717610316106466 0.0 27 2.3272212745260033E-4 0.0 0.0 36.38028657402774 0.0 28 2.3272212745260033E-4 0.0 0.0 37.01713067580179 0.0 29 2.3272212745260033E-4 0.0 0.0 37.71436616964978 0.0 30 2.3272212745260033E-4 0.0 0.0 38.49165807534146 0.0 31 2.3272212745260033E-4 0.0 0.0 39.18714815323356 0.0 32 2.3272212745260033E-4 0.0 0.0 39.848311717326396 0.0 33 2.3272212745260033E-4 0.0 0.0 40.49853734142896 0.0 34 2.3272212745260033E-4 0.0 0.0 41.12816705725197 0.0 35 2.3272212745260033E-4 0.0 0.0 41.88079041743368 0.0 36 2.3272212745260033E-4 0.0 0.0 42.52868882026172 0.0 37 2.3272212745260033E-4 0.0 0.0 43.18601246925159 0.0 38 2.3272212745260033E-4 0.0 0.0 43.81668943464813 0.0 39 2.3272212745260033E-4 0.0 0.0 44.45388261961335 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 95 0.0 45.000004 1 CAACCGG 50 2.1827873E-11 45.000004 2 CCTCCGT 25 3.8899805E-5 45.000004 30 CTCATAG 25 3.8899805E-5 45.000004 1 TTCGAAT 25 3.8899805E-5 45.000004 21 CGGAGGT 25 3.8899805E-5 45.000004 11 CGCCCGT 25 3.8899805E-5 45.000004 39 ACGGTTC 25 3.8899805E-5 45.000004 5 CGAACAT 20 7.032291E-4 45.0 40 GCGACAA 35 1.211447E-7 45.0 39 TCCGAAC 20 7.032291E-4 45.0 17 GACGTAT 20 7.032291E-4 45.0 11 GTTAGCG 20 7.032291E-4 45.0 1 TAACGCC 20 7.032291E-4 45.0 12 TCGATCT 20 7.032291E-4 45.0 35 ACGGGTC 70 0.0 45.0 5 TCCTACG 20 7.032291E-4 45.0 13 TGTTGCG 40 6.8121153E-9 45.0 1 ACGATTG 35 1.211447E-7 45.0 1 CCGTAGA 20 7.032291E-4 45.0 24 >>END_MODULE