SRR2934789.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934789.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	631499
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	7129	1.128901233414463	No Hit
CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	6104	0.9665890207268737	No Hit
CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT	4575	0.7244667054104599	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3723	0.5895496271569709	No Hit
TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	2341	0.37070525844063096	No Hit
ACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	2028	0.3211406510540793	No Hit
CGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	1815	0.28741138149070705	No Hit
GCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	1146	0.1814729714536365	No Hit
ACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	1143	0.1809979113189411	No Hit
AGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	1107	0.1752971897025965	No Hit
GGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	954	0.15106912283313195	No Hit
AAAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	822	0.13016647690653507	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC	813	0.12874129650244892	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	760	0.12034856745616383	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	734	0.11623137962213717	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGAATCG	30	2.1639426E-6	45.000004	7
GTACCGA	30	2.1639426E-6	45.000004	8
TACTTCA	30	2.1639426E-6	45.000004	11
ACGCACG	30	2.1639426E-6	45.000004	1
CTAACGG	60	0.0	45.000004	2
TCGTCGG	30	2.1639426E-6	45.000004	2
AACGAGC	30	2.1639426E-6	45.000004	15
AGTTACG	30	2.1639426E-6	45.000004	1
TTCGGAT	30	2.1639426E-6	45.000004	15
CGCACGG	60	0.0	45.000004	2
ATACGTA	30	2.1639426E-6	45.000004	14
TCGAAGG	30	2.1639426E-6	45.000004	2
TACGTAA	30	2.1639426E-6	45.000004	15
ACGGTGC	30	2.1639426E-6	45.000004	5
CTTGTGT	20	7.030869E-4	45.0	13
AACGTTC	20	7.030869E-4	45.0	40
AAGTACG	25	3.8888018E-5	45.0	1
AACCGAG	25	3.8888018E-5	45.0	14
GATACCC	20	7.030869E-4	45.0	14
AAATCTA	20	7.030869E-4	45.0	35