##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934788.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1380201 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20899347268985 33.0 31.0 34.0 30.0 34.0 2 32.385432991281704 34.0 31.0 34.0 30.0 34.0 3 32.40337747907732 34.0 31.0 34.0 30.0 34.0 4 35.948771229697705 37.0 35.0 37.0 35.0 37.0 5 35.83248526845003 37.0 35.0 37.0 35.0 37.0 6 35.76653400482973 37.0 35.0 37.0 35.0 37.0 7 36.044366001763514 37.0 35.0 37.0 35.0 37.0 8 35.85358654282963 37.0 35.0 37.0 35.0 37.0 9 37.52129363766582 39.0 38.0 39.0 35.0 39.0 10 37.31310801832487 39.0 37.0 39.0 34.0 39.0 11 37.215616421086494 39.0 37.0 39.0 34.0 39.0 12 37.13109032669879 39.0 37.0 39.0 34.0 39.0 13 37.07575128550117 39.0 37.0 39.0 33.0 39.0 14 38.23126124383332 40.0 37.0 41.0 33.0 41.0 15 38.313241332240736 40.0 37.0 41.0 34.0 41.0 16 38.39501275538853 40.0 38.0 41.0 34.0 41.0 17 38.399036082425674 40.0 37.0 41.0 34.0 41.0 18 38.35554024377609 40.0 37.0 41.0 34.0 41.0 19 38.3293172516177 40.0 37.0 41.0 34.0 41.0 20 38.26790083473349 40.0 37.0 41.0 34.0 41.0 21 38.21733138868904 40.0 37.0 41.0 34.0 41.0 22 38.15972166372869 40.0 37.0 41.0 34.0 41.0 23 37.999062455395986 40.0 36.0 41.0 34.0 41.0 24 37.7616129824569 40.0 36.0 41.0 33.0 41.0 25 37.66950103644324 39.0 36.0 41.0 33.0 41.0 26 37.812187500226415 40.0 36.0 41.0 33.0 41.0 27 37.89332350867736 40.0 36.0 41.0 34.0 41.0 28 37.841378900609406 40.0 36.0 41.0 34.0 41.0 29 37.841727400574264 40.0 36.0 41.0 33.0 41.0 30 37.75077977772803 40.0 36.0 41.0 33.0 41.0 31 37.62092622741181 40.0 36.0 41.0 33.0 41.0 32 37.50615526289287 40.0 36.0 41.0 33.0 41.0 33 37.422040702767205 40.0 36.0 41.0 33.0 41.0 34 37.35715739953818 40.0 36.0 41.0 33.0 41.0 35 37.2627552073937 40.0 35.0 41.0 32.0 41.0 36 37.21089247145887 40.0 35.0 41.0 32.0 41.0 37 37.12029479764179 39.0 35.0 41.0 32.0 41.0 38 37.02477610145189 39.0 35.0 41.0 32.0 41.0 39 37.04296185845395 39.0 35.0 41.0 32.0 41.0 40 36.923872682312215 39.0 35.0 41.0 31.0 41.0 41 36.85203024776826 39.0 35.0 41.0 31.0 41.0 42 36.77052255432361 39.0 35.0 41.0 31.0 41.0 43 36.71002701780393 39.0 35.0 41.0 31.0 41.0 44 36.63980681074713 39.0 35.0 41.0 31.0 41.0 45 36.56760355919174 39.0 35.0 41.0 31.0 41.0 46 36.446007501805894 39.0 35.0 41.0 31.0 41.0 47 36.285299025286896 39.0 35.0 40.0 30.0 41.0 48 36.25142424907676 39.0 35.0 40.0 30.0 41.0 49 36.247661753614146 39.0 35.0 40.0 30.0 41.0 50 36.124558669353235 38.0 35.0 40.0 30.0 41.0 51 35.03340165671522 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 16.0 10 18.0 11 17.0 12 20.0 13 17.0 14 25.0 15 31.0 16 85.0 17 147.0 18 255.0 19 475.0 20 885.0 21 1449.0 22 2191.0 23 3298.0 24 4748.0 25 6980.0 26 9659.0 27 12028.0 28 13611.0 29 15894.0 30 19327.0 31 24174.0 32 32228.0 33 45067.0 34 81325.0 35 113414.0 36 105775.0 37 164776.0 38 298550.0 39 423408.0 40 300.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.01685044424689 21.555990757867878 23.889853724203938 11.537305073681297 2 32.886441902302636 24.0975046388171 25.00186567029005 18.014187788590213 3 31.641695666066028 23.904127007588023 26.982664119211623 17.471513207134322 4 28.201617010855667 25.72762952642405 26.811891891108612 19.25886157161167 5 24.341092348143494 30.022076494655487 25.565841496999347 20.070989660201665 6 26.633656981845398 33.46766159421708 24.39057789408934 15.508103529848189 7 78.85003705981954 5.693808365593127 9.705760247963884 5.750394326623441 8 78.83090941102057 4.844946496923274 9.808426453828103 6.515717638228055 9 72.27476287874013 7.18670686371043 12.663300490290908 7.875229767258538 10 37.83434441795072 25.845583360684422 20.689595211132293 15.630477010232568 11 27.77935967297517 25.20871959953659 26.320514185977263 20.691406541510982 12 25.18133228421078 22.544687331772693 31.614090991094773 20.659889392921755 13 22.93144259423084 25.041714938621258 32.34782470089502 19.679017766252887 14 19.20379712809946 28.625106053393672 29.941653425841597 22.22944339266527 15 17.922244658567845 26.43144005836831 34.7133497222506 20.932965560813244 16 19.22770668909818 26.596923201765538 32.063880550731376 22.111489558404898 17 20.55099221055484 25.723499693160633 28.42049817381671 25.305009922467814 18 20.889566084939805 25.87333294208597 31.837826519470713 21.399274453503512 19 21.827110688950377 26.75284252076328 29.208644248192833 22.211402542093506 20 22.50527278273237 26.980780335617784 29.280517837619303 21.233429044030544 21 22.21893767646886 26.559247529888765 31.025191258374683 20.196623535267687 22 20.80646224716545 25.501285682302793 28.327033526276246 25.365218544255512 23 19.36304929499399 26.025991866402066 30.444333832535985 24.166625006067957 24 21.177422708721412 24.774290121511285 30.92100353499237 23.127283634774933 25 19.563527341307534 27.00389291124988 28.758130156404754 24.674449591037828 26 19.400000434719292 28.178504435223566 28.82449730148 23.596997828577145 27 21.09424641773191 28.276750994963777 28.596342126980055 22.03266046032426 28 17.703798214897684 27.905790533407814 31.02540861802013 23.36500263367437 29 18.810086356987135 27.207341539384483 30.276025013747997 23.706547089880388 30 22.347397226925644 26.394054199352123 27.941220155615014 23.317328418107216 31 21.948614730752986 29.91288949942798 25.50179285480883 22.636702915010204 32 21.273857938082934 30.280154847011413 26.35246605385737 22.093521161048283 33 21.716836895495657 26.2854468298458 26.079969511687068 25.91774676297148 34 19.67423585405314 27.07344799779163 28.774504583028126 24.47781156512711 35 19.380800332705164 27.515050344116542 28.117788640929835 24.986360682248453 36 22.95491743593868 27.252190079560872 25.902531587790474 23.89036089670997 37 21.831747694719827 27.87123034978239 28.911151346796586 21.385870608701197 38 18.826098517534763 28.756825998532097 27.460130807034627 24.95694467689851 39 20.821025343410128 25.229078952993078 28.105254234709292 25.844641468887502 40 22.7601631936218 24.781028270520018 29.100544051192546 23.35826448466564 41 20.15684672015163 27.405935802104185 25.806603530934986 26.630613946809195 42 21.123300157006117 26.30109672431769 26.937960485465524 25.63764263321067 43 21.80081017185178 25.040628140394045 28.22030994036376 24.938251747390417 44 20.173293599990146 25.41825429774359 27.848769853086612 26.55968224917965 45 21.727415064907213 24.37514535926289 27.357754414031 26.5396851617989 46 22.99867917788786 25.978969729771244 27.74327797183164 23.27907312050926 47 20.056064297881253 25.963899461020535 30.138363904967463 23.841672336130753 48 19.808129395645995 24.59337444328761 29.50157259703478 26.096923564031616 49 20.916301321329282 22.892028045190518 31.315221478610724 24.876449154869473 50 20.40949108137148 22.714300308433337 30.463751294195557 26.412457315999628 51 19.784654553938157 22.891231059823895 27.70263171813381 29.621482668104136 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 682.0 1 1149.5 2 1617.0 3 4936.5 4 8256.0 5 5635.0 6 3014.0 7 2954.5 8 2895.0 9 2977.5 10 3060.0 11 3071.0 12 3082.0 13 3151.0 14 3220.0 15 3127.5 16 3035.0 17 2835.0 18 2635.0 19 2969.5 20 3304.0 21 3230.0 22 3156.0 23 4232.5 24 5309.0 25 5316.0 26 7773.5 27 10224.0 28 13104.0 29 15984.0 30 19059.5 31 22135.0 32 23569.5 33 25004.0 34 28365.5 35 31727.0 36 37146.0 37 42565.0 38 46386.0 39 50207.0 40 55790.5 41 61374.0 42 72464.5 43 83555.0 44 95214.0 45 106873.0 46 121392.5 47 135912.0 48 151649.5 49 167387.0 50 164072.5 51 160758.0 52 134701.5 53 108645.0 54 91385.5 55 74126.0 56 65910.0 57 57694.0 58 51226.5 59 44759.0 60 41069.0 61 37379.0 62 35396.5 63 33414.0 64 28168.0 65 22922.0 66 18972.0 67 15022.0 68 12230.5 69 9439.0 70 7318.5 71 5198.0 72 4495.0 73 3792.0 74 3255.5 75 2235.5 76 1752.0 77 1026.0 78 300.0 79 313.5 80 327.0 81 206.0 82 85.0 83 116.0 84 147.0 85 149.0 86 151.0 87 83.0 88 15.0 89 11.0 90 7.0 91 4.5 92 2.0 93 1.5 94 1.0 95 2.0 96 3.0 97 4.0 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1380201.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.818205427588264 #Duplication Level Percentage of deduplicated Percentage of total 1 67.796384634112 16.14788216463068 2 12.428442784446968 5.9204640676997 3 5.623839501316843 4.018492936024503 4 3.1113278784373275 2.9642498624481055 5 1.9900608090896006 2.3699838582144315 6 1.3228723498947346 1.8905067230561525 7 0.9492072422739704 1.5825889162885176 8 0.6786462347624039 1.2931308345784185 9 0.5176963713008139 1.1097538668683815 >10 3.607819829749928 18.61187903048787 >50 1.5006902372814215 26.207479720748715 >100 0.4641105363600249 14.677846791510515 >500 0.005525125432109337 0.8802482297579319 >1k 0.0027625627160546683 1.428063843177881 >5k 6.139028257899263E-4 0.8974291545081905 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 6880 0.4984781202158236 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 5395 0.39088509572156516 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4704 0.34081992405453987 No Hit CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 3897 0.2823501794303873 TruSeq Adapter, Index 14 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 2629 0.19047950262316865 TruSeq Adapter, Index 21 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 1868 0.13534260589580793 TruSeq Adapter, Index 14 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG 1683 0.12193876109349291 TruSeq Adapter, Index 14 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4490643029529756E-4 0.0 0.0 0.30633219364425907 0.0 2 1.4490643029529756E-4 0.0 0.0 1.6176629346015543 0.0 3 1.4490643029529756E-4 0.0 0.0 2.3382101592449214 0.0 4 1.4490643029529756E-4 0.0 0.0 3.1403397041445413 0.0 5 1.4490643029529756E-4 0.0 0.0 5.20069178329823 0.0 6 1.4490643029529756E-4 0.0 0.0 6.254233984760191 0.0 7 1.4490643029529756E-4 0.0 0.0 7.342988448783909 0.0 8 1.4490643029529756E-4 0.0 0.0 9.050276010523104 0.0 9 1.4490643029529756E-4 0.0 0.0 9.646565971188254 0.0 10 1.4490643029529756E-4 0.0 0.0 11.049694935737621 0.0 11 1.4490643029529756E-4 0.0 0.0 13.20648224425283 0.0 12 1.4490643029529756E-4 0.0 0.0 14.760168989879011 0.0 13 1.4490643029529756E-4 0.0 0.0 15.388555724854568 0.0 14 1.4490643029529756E-4 0.0 0.0 15.625912457678266 0.0 15 1.4490643029529756E-4 0.0 0.0 16.120115838200377 0.0 16 1.4490643029529756E-4 0.0 0.0 17.25705169029728 0.0 17 1.4490643029529756E-4 0.0 0.0 18.588524425065625 0.0 18 1.4490643029529756E-4 0.0 0.0 20.109824583520805 0.0 19 1.4490643029529756E-4 0.0 0.0 20.968105370159854 0.0 20 1.4490643029529756E-4 0.0 0.0 21.796752791803513 0.0 21 1.4490643029529756E-4 0.0 0.0 22.857685221210534 0.0 22 1.4490643029529756E-4 0.0 0.0 23.89934509538828 0.0 23 1.4490643029529756E-4 0.0 0.0 24.9617990423134 0.0 24 2.1735964544294635E-4 0.0 0.0 25.76929012513395 0.0 25 2.1735964544294635E-4 0.0 0.0 26.49918381453136 0.0 26 2.1735964544294635E-4 0.0 0.0 27.183866697676642 0.0 27 2.1735964544294635E-4 0.0 0.0 27.826309356390844 0.0 28 2.1735964544294635E-4 0.0 0.0 28.469983719762556 0.0 29 2.1735964544294635E-4 0.0 0.0 29.15328999182003 0.0 30 2.1735964544294635E-4 0.0 0.0 29.896949792095498 0.0 31 2.1735964544294635E-4 0.0 0.0 30.613439636690597 0.0 32 2.1735964544294635E-4 0.0 0.0 31.24943395925666 0.0 33 3.6226607573824394E-4 0.0 0.0 31.877241068511037 0.0 34 3.6226607573824394E-4 0.0 0.0 32.50954027710457 0.0 35 4.347192908858927E-4 0.0 0.0 33.19661411634972 0.0 36 4.347192908858927E-4 0.0 0.0 33.80485885751423 0.0 37 4.347192908858927E-4 0.0 0.0 34.400062019952166 0.0 38 5.071725060335415E-4 0.0 0.0 35.012726407240685 0.0 39 5.071725060335415E-4 0.0 0.0 35.609088821120984 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTA 20 7.033778E-4 45.000004 34 CAATTCG 30 2.1658198E-6 45.000004 15 CGCGAAA 20 7.033778E-4 45.000004 37 AAACGCG 20 7.033778E-4 45.000004 1 GTCGTAG 20 7.033778E-4 45.000004 1 CTCGACG 20 7.033778E-4 45.000004 15 CCGCGAA 20 7.033778E-4 45.000004 36 TAAGCGA 20 7.033778E-4 45.000004 37 TATCGCG 20 7.033778E-4 45.000004 1 TTCGAAC 20 7.033778E-4 45.000004 36 CCTGATA 20 7.033778E-4 45.000004 30 ATACCGG 30 2.1658198E-6 45.000004 2 ATCGCAC 20 7.033778E-4 45.000004 12 TCGAACG 30 2.1658198E-6 45.000004 1 AATCGGC 20 7.033778E-4 45.000004 11 CGAAGTC 30 2.1658198E-6 45.000004 14 CGGACGA 20 7.033778E-4 45.000004 42 TAGGTCG 25 3.891215E-5 45.0 1 CAATGCG 25 3.891215E-5 45.0 45 TGTCGCG 25 3.891215E-5 45.0 1 >>END_MODULE