##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934787.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 794824 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94871191609715 33.0 31.0 34.0 30.0 34.0 2 32.12657141706843 33.0 31.0 34.0 30.0 34.0 3 32.141986150393045 34.0 31.0 34.0 30.0 34.0 4 35.76052685877628 37.0 35.0 37.0 35.0 37.0 5 35.632472094451096 37.0 35.0 37.0 33.0 37.0 6 35.53885136835324 37.0 35.0 37.0 33.0 37.0 7 35.905246947751955 37.0 35.0 37.0 35.0 37.0 8 35.63499969804636 37.0 35.0 37.0 35.0 37.0 9 37.398905921310885 39.0 37.0 39.0 35.0 39.0 10 37.18154459352007 39.0 37.0 39.0 34.0 39.0 11 37.059793111430956 39.0 37.0 39.0 33.0 39.0 12 36.841538504121665 39.0 35.0 39.0 33.0 39.0 13 36.60563973911206 39.0 35.0 39.0 33.0 39.0 14 37.594164242649946 39.0 36.0 41.0 33.0 41.0 15 37.66291405392892 39.0 36.0 41.0 33.0 41.0 16 37.884746811872816 40.0 36.0 41.0 33.0 41.0 17 37.8549389550391 39.0 36.0 41.0 33.0 41.0 18 37.84982461526074 39.0 36.0 41.0 33.0 41.0 19 37.83241824605196 39.0 36.0 41.0 34.0 41.0 20 37.71767208841202 39.0 35.0 41.0 33.0 41.0 21 37.64569011504434 39.0 35.0 41.0 33.0 41.0 22 37.585003724094896 39.0 35.0 41.0 33.0 41.0 23 37.38881060461184 39.0 35.0 41.0 33.0 41.0 24 37.09042379193381 39.0 35.0 41.0 32.0 41.0 25 37.0442890501545 39.0 35.0 40.0 32.0 41.0 26 37.27451234487132 39.0 35.0 40.0 33.0 41.0 27 37.34010044991092 39.0 35.0 41.0 33.0 41.0 28 37.219322768310974 39.0 35.0 41.0 33.0 41.0 29 37.296661902509236 39.0 35.0 41.0 33.0 41.0 30 37.194463176753594 39.0 35.0 41.0 32.0 41.0 31 37.00882207885016 39.0 35.0 41.0 32.0 41.0 32 36.93858137147343 39.0 35.0 41.0 32.0 41.0 33 36.77088638491037 39.0 35.0 40.0 31.0 41.0 34 36.69646739403944 39.0 35.0 40.0 31.0 41.0 35 36.72508505027528 39.0 35.0 41.0 31.0 41.0 36 36.563080631687015 39.0 35.0 40.0 31.0 41.0 37 36.411590490473365 39.0 35.0 40.0 30.0 41.0 38 36.27020447293992 38.0 35.0 40.0 30.0 41.0 39 36.35881025233259 39.0 35.0 40.0 30.0 41.0 40 36.29090968566626 39.0 35.0 40.0 30.0 41.0 41 36.17433419222369 38.0 35.0 40.0 30.0 41.0 42 36.05647162139039 38.0 35.0 40.0 30.0 41.0 43 35.95291536239469 38.0 35.0 40.0 30.0 41.0 44 35.830878282487696 38.0 35.0 40.0 29.0 41.0 45 35.81117706561452 38.0 35.0 40.0 29.0 41.0 46 35.73713174237315 38.0 35.0 40.0 28.0 41.0 47 35.457096162169236 38.0 34.0 40.0 28.0 41.0 48 35.427819240485945 38.0 34.0 40.0 28.0 41.0 49 35.436710517045285 38.0 34.0 40.0 28.0 41.0 50 35.310944309683656 38.0 34.0 40.0 28.0 41.0 51 34.13501227944803 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 9.0 11 23.0 12 13.0 13 5.0 14 13.0 15 20.0 16 42.0 17 86.0 18 175.0 19 385.0 20 709.0 21 1244.0 22 1806.0 23 2683.0 24 3859.0 25 5413.0 26 7103.0 27 8303.0 28 9790.0 29 11193.0 30 14120.0 31 17997.0 32 23521.0 33 32783.0 34 59011.0 35 80094.0 36 65761.0 37 99485.0 38 168196.0 39 180859.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.44990085855485 21.287479995571346 23.20161444546214 13.061004700411663 2 31.019445814419296 28.35936005958552 22.578835062856683 18.042359063138505 3 28.386913329240183 26.404713496321197 28.282487695389168 16.925885479049448 4 27.139844795829017 24.396092719897737 30.09295139552907 18.371111088744176 5 26.377160226666536 26.198001066902858 26.934264692560866 20.490574013869736 6 23.79935683874669 32.308284601370865 27.043471259046026 16.848887300836413 7 72.12665948688011 5.603253047215484 15.621949010095317 6.648138455809084 8 69.75368131812829 7.395222086902257 13.345470192143166 9.505626402826287 9 64.58536732660313 6.291581532515375 16.129734381447967 12.993316759433535 10 38.90622326452146 22.41527684116232 23.031891336950068 15.646608557366159 11 29.453187120670737 23.747144021821185 26.3450776524111 20.45459120509698 12 26.544492868861536 19.768275744064095 32.87671232876712 20.810519058307246 13 21.157765744366046 26.833739293227183 34.59658993689169 17.411905025515082 14 16.711120952563082 31.4974132638169 29.348258230752972 22.44320755286705 15 13.076605638480974 26.584627540184997 41.438985234467005 18.89978158686703 16 14.690422030537578 24.919730657353075 34.51430756997775 25.875539742131593 17 15.495883365373968 25.54880074079293 30.610047004116637 28.34526888971646 18 17.01898785139855 25.346995058025424 34.195620665707125 23.438396424868902 19 19.13794752045736 26.82631626624259 29.69009491409419 24.345641299205862 20 21.688323452739223 26.86619930953268 31.588880053949048 19.85659718377905 21 19.403289281652288 28.69868046259298 31.8927209042505 20.005309351504234 22 16.37217799160569 25.799925518102118 29.097510895493844 28.730385594798346 23 16.374820085956134 28.26625768723642 29.769483558624298 25.589438668183146 24 20.92324841725967 23.30566263726309 30.39301782532988 25.378071120147354 25 16.49182712147595 28.876329854156392 27.707266011091765 26.924577013275897 26 16.537245981500305 26.801279276921687 29.763067043773212 26.8984076978048 27 22.586132275824585 27.92995682062947 27.441798435880145 22.0421124676658 28 15.388564009139131 27.085115698569744 32.94414864171188 24.582171650579248 29 17.59383209364589 21.952155445733897 32.65351826316266 27.80049419745755 30 22.46610570390426 24.79114873229797 30.556827675057622 22.185917888740146 31 23.746263323704365 27.982672893621736 24.08407395851157 24.186989824162332 32 24.967414169677816 26.764038327982043 26.612935693939793 21.655611808400348 33 23.213818405080875 26.868715589866436 26.933383994444053 22.98408201060864 34 22.256373738085415 25.134872625889503 28.62960856743128 23.9791450685938 35 23.461294575906113 21.477584974786872 28.07124596137006 26.989874487936955 36 24.546314655823174 26.785049268768933 27.16727225146699 21.501363823940896 37 23.895856189546365 25.712358962487293 31.861519028111886 18.530265819854456 38 20.2232192284078 29.11336346159653 28.3281581834469 22.33525912654877 39 22.534422714965828 23.95146598492245 32.769267158515596 20.74484414159613 40 25.986256076817003 20.080797761517015 32.1092468269705 21.82369933469548 41 23.496396686562058 24.66810262397713 24.984776503980754 26.850724185480058 42 23.842636860487353 23.768280776624763 27.578306643986593 24.81077571890129 43 24.733022656588126 25.14380542107435 27.000191237305366 23.122980685032157 44 20.749876702263645 23.661338862439987 29.77388704920838 25.81489738608799 45 20.712761567340696 20.889027004720543 29.330770082433343 29.06744134550542 46 26.68968224411945 22.287323986190653 29.025042021881575 21.99795174780832 47 19.42014835988848 22.656839753203226 34.87551961188892 23.047492275019376 48 21.553576640866407 20.998485199239077 30.72378287520256 26.724155284691957 49 21.361458637383873 18.963946735377895 36.13353396475195 23.541060662486284 50 22.051045262850643 19.004207220718044 32.95987539379787 25.98487212263344 51 19.81017181162119 19.482174670115647 27.700723682223988 33.00692983603917 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 987.0 1 1053.0 2 1119.0 3 3535.5 4 5952.0 5 3920.0 6 1888.0 7 1954.5 8 2021.0 9 2128.0 10 2235.0 11 2202.5 12 2170.0 13 2134.5 14 2099.0 15 2075.5 16 2052.0 17 2025.5 18 1999.0 19 2115.0 20 2231.0 21 2103.5 22 1976.0 23 2069.0 24 2162.0 25 2410.5 26 3853.5 27 5048.0 28 5754.0 29 6460.0 30 6944.5 31 7429.0 32 9095.5 33 10762.0 34 11460.0 35 12158.0 36 14799.0 37 17440.0 38 19016.5 39 20593.0 40 24850.0 41 29107.0 42 37501.5 43 45896.0 44 54841.5 45 63787.0 46 88106.0 47 112425.0 48 116261.0 49 120097.0 50 116060.0 51 112023.0 52 87869.5 53 63716.0 54 52324.5 55 40933.0 56 33538.0 57 26143.0 58 23707.5 59 21272.0 60 17904.0 61 14536.0 62 13653.5 63 12771.0 64 10362.0 65 7953.0 66 6481.5 67 5010.0 68 4058.5 69 3107.0 70 2480.5 71 1854.0 72 1566.0 73 1278.0 74 931.0 75 578.0 76 572.0 77 386.0 78 200.0 79 148.5 80 97.0 81 54.5 82 12.0 83 10.0 84 8.0 85 5.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 794824.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.998025273729183 #Duplication Level Percentage of deduplicated Percentage of total 1 65.00893376497287 14.950771017450323 2 12.310092610737298 5.662156419673665 3 6.216236162756267 4.288834691356138 4 3.6197859989145718 3.3299171955411344 5 2.398474357877837 2.7580086950432934 6 1.6440688430289154 2.2686202082237816 7 1.1911905431508645 1.9176521152047543 8 0.9111363331835848 1.6763469134695212 9 0.6903150273400588 1.428829420104155 >10 4.45609289529199 20.588323543214052 >50 1.1568262388925674 19.11828078553542 >100 0.3808185755360093 12.676837214837816 >500 0.005527120109376042 0.9722861740947412 >1k 0.007737968153126459 3.391879235134537 >5k 0.002763560054688021 4.971256371116647 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 9117 1.1470463901442332 No Hit CCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 8040 1.0115446941712882 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGC 7849 0.9875142169838859 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCG 7292 0.9174358096886859 No Hit GAATCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTC 6811 0.8569192676617716 No Hit CTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGCT 4741 0.5964842531176714 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3901 0.4908004790997756 No Hit TCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 2910 0.36611878856199614 No Hit ACTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 2195 0.27616176663009673 No Hit CGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 1877 0.23615290932332192 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCT 1648 0.20734149950177647 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGATTGGAT 1540 0.1937535856994756 No Hit ACCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 1273 0.1601612432437873 No Hit AGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 1234 0.15525449659295643 No Hit GCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 1209 0.15210914617575713 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTC 1071 0.13474681187281712 No Hit GGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 1036 0.13034332128873816 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGATTGGATCGTA 1030 0.1295884371886103 No Hit GAACTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCT 1019 0.1282044830050426 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCC 934 0.11751029158656508 No Hit AAAACTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTC 890 0.11197447485229435 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 858 0.10794842631827928 No Hit GACCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCT 844 0.10618703008464768 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6393868328082695 0.0 2 0.0 0.0 0.0 3.647222529767596 0.0 3 0.0 0.0 0.0 4.934048292452165 0.0 4 0.0 0.0 0.0 6.445577888941451 0.0 5 0.0 0.0 0.0 10.75068191197045 0.0 6 1.2581401668797118E-4 0.0 0.0 12.42803438245448 0.0 7 1.2581401668797118E-4 0.0 0.0 14.39815606977142 0.0 8 1.2581401668797118E-4 0.0 0.0 17.14794721850372 0.0 9 1.2581401668797118E-4 0.0 0.0 18.044120459372138 0.0 10 1.2581401668797118E-4 0.0 0.0 20.93696214507866 0.0 11 1.2581401668797118E-4 0.0 0.0 23.95247249705595 0.0 12 1.2581401668797118E-4 0.0 0.0 27.312084184674845 0.0 13 1.2581401668797118E-4 0.0 0.0 28.26298652280253 0.0 14 1.2581401668797118E-4 0.0 0.0 28.626966473080834 0.0 15 1.2581401668797118E-4 0.0 0.0 29.406887562529565 0.0 16 1.2581401668797118E-4 0.0 0.0 30.86708504021016 0.0 17 1.2581401668797118E-4 0.0 0.0 32.57501031674937 0.0 18 1.2581401668797118E-4 0.0 0.0 34.60074179944239 0.0 19 1.2581401668797118E-4 1.2581401668797118E-4 0.0 35.85623987197166 0.0 20 1.2581401668797118E-4 1.2581401668797118E-4 0.0 36.85797107284128 0.0 21 1.2581401668797118E-4 1.2581401668797118E-4 0.0 38.06452749287892 0.0 22 2.5162803337594236E-4 1.2581401668797118E-4 0.0 39.21245458113997 0.0 23 3.7744205006391354E-4 1.2581401668797118E-4 0.0 40.41183960222641 0.0 24 3.7744205006391354E-4 1.2581401668797118E-4 0.0 41.283856551890736 0.0 25 3.7744205006391354E-4 1.2581401668797118E-4 0.0 42.01584250098135 0.0 26 3.7744205006391354E-4 1.2581401668797118E-4 0.0 42.71989773836724 0.0 27 3.7744205006391354E-4 1.2581401668797118E-4 0.0 43.383063420329535 0.0 28 3.7744205006391354E-4 1.2581401668797118E-4 0.0 44.04434189204151 0.0 29 3.7744205006391354E-4 1.2581401668797118E-4 0.0 44.74990689762765 0.0 30 3.7744205006391354E-4 1.2581401668797118E-4 0.0 45.54681287932926 0.0 31 3.7744205006391354E-4 1.2581401668797118E-4 0.0 46.301319537407025 0.0 32 3.7744205006391354E-4 1.2581401668797118E-4 0.0 46.963478707235815 0.0 33 3.7744205006391354E-4 1.2581401668797118E-4 0.0 47.54901714090163 0.0 34 3.7744205006391354E-4 1.2581401668797118E-4 0.0 48.174690245890915 0.0 35 3.7744205006391354E-4 1.2581401668797118E-4 0.0 48.877864785159986 0.0 36 3.7744205006391354E-4 1.2581401668797118E-4 0.0 49.520271154368764 0.0 37 3.7744205006391354E-4 1.2581401668797118E-4 0.0 50.13449518383944 0.0 38 3.7744205006391354E-4 1.2581401668797118E-4 0.0 50.71424617273761 0.0 39 3.7744205006391354E-4 1.2581401668797118E-4 0.0 51.3000362344368 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 30 2.164652E-6 45.000004 1 CGGGTGT 60 0.0 45.000004 6 CGCATTG 30 2.164652E-6 45.000004 2 TTCGTTG 30 2.164652E-6 45.000004 31 TCGATAG 30 2.164652E-6 45.000004 1 TCGATAC 30 2.164652E-6 45.000004 24 TGCGAAT 30 2.164652E-6 45.000004 27 TCTCCGA 30 2.164652E-6 45.000004 20 CTCGATA 30 2.164652E-6 45.000004 23 TATAGCG 60 0.0 45.000004 1 ATGCGAA 30 2.164652E-6 45.000004 26 CCGCGTT 30 2.164652E-6 45.000004 1 TGCGTAG 30 2.164652E-6 45.000004 1 TCGCCCC 20 7.0319726E-4 45.0 10 ACAACGT 20 7.0319726E-4 45.0 16 CTTAACG 40 6.8102963E-9 45.0 1 AACGTGT 20 7.0319726E-4 45.0 16 TCGTTTA 20 7.0319726E-4 45.0 17 GTCGCTC 25 3.889716E-5 45.0 16 TCGTTGT 20 7.0319726E-4 45.0 32 >>END_MODULE