##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934782.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1202621 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0645174165427 33.0 31.0 34.0 30.0 34.0 2 32.240552094134394 34.0 31.0 34.0 30.0 34.0 3 32.25486167296264 34.0 31.0 34.0 30.0 34.0 4 35.852631045025824 37.0 35.0 37.0 35.0 37.0 5 35.72914575747472 37.0 35.0 37.0 35.0 37.0 6 35.65118353995149 37.0 35.0 37.0 33.0 37.0 7 36.01851372959561 37.0 35.0 37.0 35.0 37.0 8 35.8308286650574 37.0 35.0 37.0 35.0 37.0 9 37.55076287541961 39.0 37.0 39.0 35.0 39.0 10 37.25754497884205 39.0 37.0 39.0 34.0 39.0 11 37.119611249096764 39.0 37.0 39.0 34.0 39.0 12 37.04171555294644 39.0 37.0 39.0 33.0 39.0 13 36.984141304700316 39.0 37.0 39.0 33.0 39.0 14 38.08969741922019 40.0 37.0 41.0 33.0 41.0 15 38.13931404823298 40.0 37.0 41.0 33.0 41.0 16 38.236121770699164 40.0 37.0 41.0 34.0 41.0 17 38.215910914577414 40.0 37.0 41.0 34.0 41.0 18 38.20451663491657 40.0 37.0 41.0 34.0 41.0 19 38.22768436606379 40.0 37.0 41.0 34.0 41.0 20 38.15520600421912 40.0 37.0 41.0 34.0 41.0 21 38.0904291543221 40.0 37.0 41.0 34.0 41.0 22 38.044989236010345 40.0 37.0 41.0 34.0 41.0 23 37.86072835914224 40.0 36.0 41.0 33.0 41.0 24 37.59472685077011 39.0 36.0 41.0 33.0 41.0 25 37.52259440006453 39.0 36.0 41.0 33.0 41.0 26 37.74239432040518 39.0 36.0 41.0 33.0 41.0 27 37.830219162978196 40.0 36.0 41.0 33.0 41.0 28 37.80538091385399 40.0 36.0 41.0 33.0 41.0 29 37.84458279042192 40.0 36.0 41.0 34.0 41.0 30 37.67220928289129 40.0 36.0 41.0 33.0 41.0 31 37.493136241592325 39.0 36.0 41.0 33.0 41.0 32 37.43433633705049 39.0 36.0 41.0 33.0 41.0 33 37.31436171495425 39.0 36.0 41.0 33.0 41.0 34 37.19756265689689 39.0 36.0 41.0 32.0 41.0 35 37.21027904884415 39.0 36.0 41.0 32.0 41.0 36 37.14904196750265 39.0 35.0 41.0 32.0 41.0 37 37.05386900777552 39.0 35.0 41.0 32.0 41.0 38 36.99218290716693 39.0 35.0 41.0 31.0 41.0 39 37.038554956216466 39.0 35.0 41.0 32.0 41.0 40 36.91543969380212 39.0 35.0 41.0 31.0 41.0 41 36.87382225988071 39.0 35.0 41.0 31.0 41.0 42 36.87035400180107 39.0 35.0 41.0 31.0 41.0 43 36.85020717250073 39.0 35.0 41.0 31.0 41.0 44 36.799322479817 39.0 35.0 41.0 31.0 41.0 45 36.7537869370317 39.0 35.0 41.0 31.0 41.0 46 36.65737917432009 39.0 35.0 41.0 31.0 41.0 47 36.488853928211796 39.0 35.0 40.0 31.0 41.0 48 36.52116003296134 39.0 35.0 40.0 31.0 41.0 49 36.547462583806535 39.0 35.0 40.0 31.0 41.0 50 36.4478867407105 39.0 35.0 40.0 31.0 41.0 51 35.49638747369288 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 16.0 11 22.0 12 9.0 13 9.0 14 12.0 15 27.0 16 53.0 17 92.0 18 186.0 19 344.0 20 664.0 21 1148.0 22 1708.0 23 2821.0 24 4125.0 25 6009.0 26 8219.0 27 9887.0 28 11359.0 29 13338.0 30 16936.0 31 21806.0 32 29297.0 33 41235.0 34 71830.0 35 96852.0 36 94584.0 37 150323.0 38 276133.0 39 343364.0 40 199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.41589162337927 21.977164875717285 24.962394636381703 12.64454886452174 2 30.104413609940288 24.86992992804882 26.544023428827536 18.481633033183357 3 29.598684872457742 24.550793641554574 28.656825383890684 17.193696102097004 4 27.9970996681415 25.637420267898197 28.753613981462156 17.611866082498143 5 25.09502162360378 28.395146933239985 26.70009919999734 19.8097322431589 6 25.361855480654338 32.47872771222189 26.10015956814325 16.059257238980525 7 77.36893002866239 5.028932639626283 11.662942855646126 5.939194476065194 8 75.43714935960706 4.88291822610781 11.591764986641676 8.088167427643455 9 70.22320415159888 6.39569739760074 14.121739101512446 9.25935934928793 10 36.22421361343266 29.957235072396042 20.72606415487506 13.092487159296237 11 23.856643115328936 23.574010432214305 31.813098224627712 20.75624822782905 12 21.85160578436598 22.294721279605128 35.51983542612344 20.333837509905447 13 20.22457615491497 26.342546820652558 36.05067598187625 17.38220104255622 14 17.16135008452372 29.715762488764124 31.598982555601474 21.523904871110684 15 15.227656925997469 27.124422407391858 38.41592654710004 19.231994119510635 16 16.346130659617618 28.400052884491455 32.62091714679853 22.63289930909239 17 16.758563171606017 27.012583349201453 30.907825491156398 25.321027988036132 18 16.77211690133467 27.295798094328973 33.947270170735415 21.984814833600943 19 18.586653650651368 27.470167243046646 30.601411417229535 23.34176768907245 20 20.192230137341692 28.267509048985506 31.64180568940672 19.898455124266082 21 20.12886852965315 27.702243682756244 32.63072904930148 19.53815873828912 22 18.204820970197595 25.314874761042756 29.60467179601886 26.87563247274079 23 16.76280390912848 27.011668680324057 31.273776193829978 24.951751216717486 24 20.483760054081877 24.109673787502466 31.429186751270766 23.977379407144895 25 16.514596036490296 28.636536365155774 29.628037428250465 25.220830170103465 26 16.154299650513337 27.310017037786633 32.61642695412769 23.919256357572337 27 19.024946346355172 27.437571770324983 29.90393482235883 23.633547060961018 28 14.265841025560006 27.52596204456766 32.312590583400755 25.895606346471585 29 16.426455217396004 23.442048658721244 32.689766767751436 27.44172935613132 30 17.80993347031193 25.73853275470826 28.910604421509355 27.54092935347046 31 17.911295412270366 32.038439375331045 24.710444936517824 25.339820275880765 32 17.065393004113517 29.618973891192653 26.003953032584665 27.31168007210917 33 16.849115390467986 26.502364419048064 25.165617430595344 31.48290275988861 34 15.400446192108735 28.576334522680046 29.089546914613994 26.933672370597222 35 15.00248207872638 26.736685955093087 27.460272188827567 30.800559777352966 36 17.3151807593581 26.857006488328413 27.634558185829118 28.19325456648437 37 16.13060141141723 29.288944729885806 28.77939101346143 25.801062845235535 38 15.267652901454406 30.38222349351957 24.8405773722561 29.509546232769925 39 18.365968996051123 25.36834131451222 27.583419880411203 28.682269809025453 40 18.53584795209796 25.798651445467858 29.51678043207295 26.148720170361234 41 16.106404262024363 28.48769479328899 26.2672945175579 29.138606427128742 42 18.402722054579122 24.530837229684167 29.190659401424057 27.875781314312654 43 20.54454395857049 23.4705696973527 27.48837746887839 28.496508875198423 44 17.610535655040117 24.620391627952614 27.863724315474286 29.905348401532983 45 18.402888358011378 22.794795700391063 27.248817374717387 31.553498566880172 46 21.205101191480942 24.526014430148816 28.537585822965006 25.731298555405235 47 14.818716786086389 26.143731067393635 32.23218287390625 26.80536927261373 48 16.886201055860493 23.85905451509661 29.06626443409852 30.188479994944377 49 18.64619027939808 20.89145291825105 33.1989878773113 27.26336892503956 50 18.079095575414033 21.162278057675692 31.4947103035786 29.263916063331674 51 17.317509007409647 20.962880242403884 27.142798936655854 34.57681181353061 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 872.0 1 1062.0 2 1252.0 3 4514.0 4 7776.0 5 5132.0 6 2488.0 7 2453.5 8 2419.0 9 2524.0 10 2629.0 11 2697.0 12 2765.0 13 2934.5 14 3104.0 15 2849.0 16 2594.0 17 2572.0 18 2550.0 19 2624.5 20 2699.0 21 3170.5 22 3642.0 23 4240.0 24 4838.0 25 5435.5 26 7639.5 27 9246.0 28 10580.5 29 11915.0 30 14075.0 31 16235.0 32 19655.5 33 23076.0 34 26632.5 35 30189.0 36 32037.5 37 33886.0 38 38065.0 39 42244.0 40 48867.5 41 55491.0 42 65443.0 43 75395.0 44 89671.0 45 103947.0 46 126176.5 47 148406.0 48 163254.0 49 178102.0 50 170858.0 51 163614.0 52 128521.5 53 93429.0 54 74575.0 55 55721.0 56 47314.0 57 38907.0 58 31755.5 59 24604.0 60 21691.0 61 18778.0 62 15851.0 63 12924.0 64 10996.0 65 9068.0 66 7291.0 67 5514.0 68 4250.5 69 2987.0 70 2180.0 71 1373.0 72 1119.0 73 865.0 74 692.5 75 382.0 76 244.0 77 157.0 78 70.0 79 116.5 80 163.0 81 91.0 82 19.0 83 19.0 84 19.0 85 11.0 86 3.0 87 3.0 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1202621.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.878980050958685 #Duplication Level Percentage of deduplicated Percentage of total 1 64.17328911066421 14.682194013672905 2 12.490074577197626 5.715203341733814 3 6.266913222392084 4.30141747788593 4 3.645186458011268 3.335925930194582 5 2.450930405713506 2.8037393929303684 6 1.7395384340388924 2.3879319078151036 7 1.2742571879029194 2.0407593347275124 8 0.9109884226067196 1.6673988757978764 9 0.7086320218382314 1.4591500101996673 >10 4.705621075735074 22.26344878015335 >50 1.2747883007791379 20.88511263699866 >100 0.34074863589537757 11.247566107236265 >500 0.012810099093792557 1.9361834404011669 >1k 0.005124039637517022 3.0270346504221863 >5k 7.320056625024318E-4 1.337542517668361 >10k+ 3.660028312512159E-4 0.909391582162299 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 10860 0.903027637135889 RNA PCR Primer, Index 14 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 8838 0.7348948671277152 RNA PCR Primer, Index 16 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 7135 0.5932874945639566 RNA PCR Primer, Index 16 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4872 0.40511516096924965 No Hit TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 4527 0.3764278189055405 RNA PCR Primer, Index 14 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 3966 0.3297797061584656 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 3699 0.30757819795263847 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 3509 0.29177937188856673 No Hit ACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 3006 0.24995405867684 RNA PCR Primer, Index 14 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 2609 0.21694282737454276 RNA PCR Primer, Index 16 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1894 0.15748935034395709 RNA PCR Primer, Index 14 (95% over 22bp) AGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1767 0.14692908239586702 RNA PCR Primer, Index 16 (95% over 22bp) ACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1571 0.13063134603503515 RNA PCR Primer, Index 14 (95% over 22bp) GGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1329 0.11050863073237537 RNA PCR Primer, Index 16 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.628959580782308 0.0 2 0.0 0.0 0.0 3.0539130781850643 0.0 3 0.0 0.0 0.0 4.25703525882219 0.0 4 0.0 0.0 0.0 5.540897755818333 0.0 5 0.0 0.0 0.0 9.071602774273856 0.0 6 0.0 0.0 0.0 10.569664092012363 0.0 7 0.0 0.0 0.0 12.305456166157086 0.0 8 0.0 0.0 0.0 14.918748300586802 0.0 9 0.0 0.0 0.0 15.805644504794111 0.0 10 0.0 0.0 0.0 18.03394419355724 0.0 11 0.0 0.0 0.0 20.870581837503252 0.0 12 0.0 0.0 0.0 23.442464417301878 0.0 13 0.0 0.0 0.0 24.31497537461927 0.0 14 0.0 0.0 0.0 24.644505625629353 0.0 15 0.0 0.0 0.0 25.32385514638444 0.0 16 0.0 0.0 0.0 26.66658905839828 0.0 17 0.0 0.0 0.0 28.4955110546049 0.0 18 0.0 0.0 0.0 30.459804044665777 0.0 19 0.0 0.0 0.0 31.621849277536313 0.0 20 0.0 0.0 0.0 32.64062410352056 0.0 21 0.0 0.0 0.0 33.83667838828692 0.0 22 0.0 0.0 0.0 35.11887785096053 0.0 23 0.0 0.0 0.0 36.39633766581492 0.0 24 0.0 0.0 0.0 37.34875742233006 0.0 25 0.0 0.0 0.0 38.129468885043586 0.0 26 0.0 0.0 0.0 38.88041203338375 0.0 27 0.0 0.0 0.0 39.55618603034539 0.0 28 0.0 0.0 0.0 40.266052230918966 0.0 29 8.315171612669328E-5 0.0 0.0 41.041608287232634 0.0 30 8.315171612669328E-5 0.0 0.0 41.91636434088545 0.0 31 8.315171612669328E-5 0.0 0.0 42.667307489225614 0.0 32 8.315171612669328E-5 0.0 0.0 43.38083236530877 0.0 33 8.315171612669328E-5 0.0 0.0 44.05660636227041 0.0 34 8.315171612669328E-5 0.0 0.0 44.780192596004895 0.0 35 8.315171612669328E-5 0.0 0.0 45.508102718977966 0.0 36 8.315171612669328E-5 0.0 0.0 46.19668208022311 0.0 37 8.315171612669328E-5 0.0 0.0 46.853497485907866 0.0 38 8.315171612669328E-5 0.0 0.0 47.49784013417361 0.0 39 8.315171612669328E-5 0.0 0.0 48.15989409797434 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 30 2.165585E-6 45.000004 1 ACTGCGC 20 7.033416E-4 45.000004 27 CGAGTTA 20 7.033416E-4 45.000004 14 GTCGAGT 20 7.033416E-4 45.000004 38 GTCGACG 30 2.165585E-6 45.000004 1 GATCGAC 20 7.033416E-4 45.000004 42 CCTAGCG 20 7.033416E-4 45.000004 1 ACGCAGT 20 7.033416E-4 45.000004 16 TAGCGTT 20 7.033416E-4 45.000004 27 CCGTGAT 30 2.165585E-6 45.000004 30 CGCGCCT 20 7.033416E-4 45.000004 17 GCCGGAC 20 7.033416E-4 45.000004 11 GTTAGCG 60 0.0 45.000004 1 ATTCGAT 20 7.033416E-4 45.000004 22 CGCTGTA 20 7.033416E-4 45.000004 42 TCGATTG 30 2.165585E-6 45.000004 1 TCGATAT 20 7.033416E-4 45.000004 24 AGAACCG 20 7.033416E-4 45.000004 3 AGACGCA 20 7.033416E-4 45.000004 17 GTAGCGT 20 7.033416E-4 45.000004 43 >>END_MODULE