##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934780.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 653040 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11839091020458 33.0 31.0 34.0 30.0 34.0 2 32.30025878966067 34.0 31.0 34.0 30.0 34.0 3 32.29785618032586 34.0 31.0 34.0 30.0 34.0 4 35.87761546000245 37.0 35.0 37.0 35.0 37.0 5 35.77464780105353 37.0 35.0 37.0 35.0 37.0 6 35.708148046061496 37.0 35.0 37.0 33.0 37.0 7 36.03663787823104 37.0 35.0 37.0 35.0 37.0 8 35.86554881783658 37.0 35.0 37.0 35.0 37.0 9 37.58018651231165 39.0 38.0 39.0 35.0 39.0 10 37.33729939973049 39.0 37.0 39.0 34.0 39.0 11 37.223595798113436 39.0 37.0 39.0 34.0 39.0 12 37.04294530197232 39.0 37.0 39.0 33.0 39.0 13 36.879094695577606 39.0 35.0 39.0 33.0 39.0 14 37.94803687369839 40.0 37.0 41.0 33.0 41.0 15 38.06191810608845 40.0 37.0 41.0 33.0 41.0 16 38.182867818204095 40.0 37.0 41.0 34.0 41.0 17 38.17019784392993 40.0 37.0 41.0 34.0 41.0 18 38.15683572216097 40.0 37.0 41.0 34.0 41.0 19 38.11821940463065 40.0 37.0 41.0 34.0 41.0 20 38.04780258483401 40.0 36.0 41.0 34.0 41.0 21 37.94674751929438 40.0 36.0 41.0 34.0 41.0 22 37.883472681612155 40.0 36.0 41.0 34.0 41.0 23 37.73512801666054 39.0 35.0 41.0 33.0 41.0 24 37.45935011637878 39.0 35.0 41.0 33.0 41.0 25 37.39399730491241 39.0 35.0 41.0 33.0 41.0 26 37.58534852382702 39.0 35.0 41.0 33.0 41.0 27 37.68459971824084 39.0 35.0 41.0 33.0 41.0 28 37.69485942668137 39.0 36.0 41.0 33.0 41.0 29 37.68640665196619 39.0 36.0 41.0 33.0 41.0 30 37.484143390910205 39.0 36.0 41.0 33.0 41.0 31 37.361437277961535 39.0 35.0 41.0 33.0 41.0 32 37.20855996569888 39.0 35.0 41.0 33.0 41.0 33 37.058050042876395 39.0 35.0 41.0 32.0 41.0 34 37.05220354036506 39.0 35.0 41.0 32.0 41.0 35 36.907230797500915 39.0 35.0 41.0 31.0 41.0 36 36.83069796643391 39.0 35.0 41.0 31.0 41.0 37 36.7870421413696 39.0 35.0 41.0 31.0 41.0 38 36.66051849810119 39.0 35.0 41.0 31.0 41.0 39 36.708961166237906 39.0 35.0 41.0 31.0 41.0 40 36.60770243782923 39.0 35.0 41.0 31.0 41.0 41 36.51955316672792 39.0 35.0 41.0 31.0 41.0 42 36.47688043611417 39.0 35.0 41.0 31.0 41.0 43 36.46805861815509 39.0 35.0 41.0 31.0 41.0 44 36.37052554208012 39.0 35.0 40.0 31.0 41.0 45 36.310892135244394 39.0 35.0 40.0 31.0 41.0 46 36.22836885948794 39.0 35.0 40.0 30.0 41.0 47 36.085175486953325 38.0 35.0 40.0 30.0 41.0 48 36.07639807668749 38.0 35.0 40.0 30.0 41.0 49 36.08707889256401 38.0 35.0 40.0 30.0 41.0 50 35.97371830209482 38.0 35.0 40.0 30.0 41.0 51 34.939363591816736 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 10.0 11 18.0 12 8.0 13 6.0 14 13.0 15 21.0 16 40.0 17 60.0 18 131.0 19 265.0 20 452.0 21 736.0 22 1155.0 23 1709.0 24 2561.0 25 3733.0 26 4939.0 27 6162.0 28 6767.0 29 7952.0 30 9469.0 31 12229.0 32 15766.0 33 23448.0 34 43914.0 35 61654.0 36 51743.0 37 78490.0 38 142893.0 39 176589.0 40 102.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.60954918534852 21.09380742374127 24.17187308587529 13.124770305034913 2 32.230338110988605 24.18274531422271 25.46275878966067 18.124157785128016 3 30.826748744334193 24.398505451427173 28.064283964228835 16.7104618400098 4 28.359977949283348 24.867389440156806 27.029431581526396 19.743201029033443 5 24.369104495896117 28.59916697292662 27.295571481073132 19.73615705010413 6 25.4250888153865 31.9328065662134 27.10170893054024 15.540395687859856 7 75.8968822736739 6.063640818326595 12.048725958593655 5.9907509494058555 8 74.82236922699987 4.766323655518804 11.955010412838417 8.4562967046429 9 69.55791375719711 6.240505941443097 15.056811221364693 9.144769079995099 10 38.09046919024868 24.97289599411981 21.61843072399853 15.318204091632978 11 28.773428886438808 24.777808403773122 26.347696925150068 20.101065784638 12 26.206817346563767 21.951794683327208 32.25009187798604 19.591296092122995 13 22.226509861570502 27.35896729143697 32.66262403528115 17.75189881171138 14 17.115184368491974 29.408918289844422 31.491945363224303 21.9839519784393 15 15.222497856180325 26.604495896116624 38.05249295602107 20.12051329168198 16 17.81253828249418 25.725376699742743 34.02685899791743 22.435226019845643 17 17.53200416513537 25.955071664829106 29.572614234962636 26.940309935072893 18 18.76470047776553 25.20473477888031 33.754440769325 22.276123974029154 19 19.994640450814654 27.82218547102781 29.68424598799461 22.49892809016293 20 22.9560210706848 26.44309690064927 30.03001347543795 20.57086855322798 21 20.500428763934828 27.268008085262775 31.67968271468823 20.55188043611417 22 18.91201151537425 25.697813303932378 28.892410878353548 26.497764302339828 23 19.097298787210583 26.40450814651476 29.335569030993508 25.162624035281144 24 21.82347176283229 23.432714688227367 30.734564498346195 24.009249050594146 25 18.457828004410143 26.80279921597452 29.018589979174326 25.720782800441018 26 17.929529584711503 27.1917493568541 31.462391277716527 23.416329780717874 27 22.085170893054023 26.741087835354648 30.056504961411246 21.117236310180083 28 17.4134815631508 24.487780227857407 32.12222834742129 25.976509861570502 29 20.968393972804115 22.596165625382824 33.19597574421169 23.23946465760137 30 23.755359549185346 23.516629915472254 30.76610927355139 21.96190126179101 31 24.33342521131937 24.79909347053779 26.31278329045694 24.5546980276859 32 24.638000735023887 24.80475927967659 29.257932132794316 21.299307852505205 33 23.057699375229696 22.980828126914123 31.759769692515004 22.20170280534117 34 21.851035158642656 21.89008330270734 32.33523214504471 23.92364939360529 35 22.277961533749846 20.514363591816736 33.38095675609457 23.826718118338846 36 23.555218669606763 21.151690554943038 34.08657968883988 21.206511086610313 37 23.31235452652211 22.567377189758666 32.897678549552865 21.222589734166363 38 20.51528237167708 24.69328065662134 30.843133651843686 23.948303319857896 39 22.863224304789906 21.673557515619258 33.72228347421291 21.740934705377928 40 24.33342521131937 20.684337865980645 34.39620850177631 20.58602842092368 41 20.37991547225285 21.971395320347913 31.826687492343503 25.822001715055737 42 21.896208501776307 20.09892196496386 34.02747151782433 23.977398015435504 43 24.686083547715302 20.935930417738575 30.43136714443219 23.94661889011393 44 21.00575768712483 22.735207644248437 30.07243047899057 26.186604189636164 45 22.50352198946466 21.362397402915594 28.625658458899917 27.508422148719834 46 25.331220139654537 21.234993262281023 30.913879701090284 22.519906896974152 47 19.586549062844544 21.839703540365065 35.46061496998652 23.11313242680387 48 20.25986157050104 19.490383437461716 33.7601065784638 26.48964841357344 49 21.889164522846993 17.7835967168933 36.31400833027074 24.013230429988973 50 20.854465270121278 18.44511821634203 34.6961901261791 26.004226387357587 51 19.585936542937645 19.239097145657233 30.531667279186575 30.643299032218547 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 656.0 1 787.5 2 919.0 3 3017.5 4 5116.0 5 3374.5 6 1633.0 7 1670.5 8 1708.0 9 1774.5 10 1841.0 11 1910.5 12 1980.0 13 1916.5 14 1853.0 15 1831.0 16 1809.0 17 1803.5 18 1798.0 19 1643.5 20 1489.0 21 1583.0 22 1677.0 23 1844.5 24 2012.0 25 2337.0 26 3634.5 27 4607.0 28 5285.0 29 5963.0 30 7833.5 31 9704.0 32 10261.5 33 10819.0 34 12049.5 35 13280.0 36 14959.0 37 16638.0 38 18263.5 39 19889.0 40 23399.0 41 26909.0 42 32773.5 43 38638.0 44 43313.5 45 47989.0 46 58614.0 47 69239.0 48 80113.5 49 90988.0 50 88894.5 51 86801.0 52 68815.5 53 50830.0 54 42422.5 55 34015.0 56 29987.0 57 25959.0 58 22564.5 59 19170.0 60 17631.5 61 16093.0 62 15232.5 63 14372.0 64 11886.5 65 9401.0 66 7378.0 67 5355.0 68 4447.5 69 3540.0 70 2967.0 71 2394.0 72 1861.0 73 1328.0 74 1143.5 75 695.5 76 432.0 77 420.0 78 408.0 79 274.5 80 141.0 81 77.0 82 13.0 83 9.0 84 5.0 85 4.5 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 653040.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.146157207982917 #Duplication Level Percentage of deduplicated Percentage of total 1 65.60897693598588 16.498136482872265 2 12.999178872558101 6.537587910080724 3 6.187675196985824 4.6678875976602665 4 3.4578330157549373 3.4780485045250935 5 2.14952994551496 2.702620896659307 6 1.4538308659811994 2.1934955705868715 7 1.0535938207371789 1.854568509473153 8 0.7321821169455938 1.4729253294070108 9 0.5963443525810547 1.3496191956086396 >10 4.193282397037325 23.611970748108806 >50 1.4005209100958202 24.244733386450974 >100 0.15349018777018453 6.179686630762999 >500 0.009246396853625573 1.6064984132547655 >1k 0.003082132284541858 1.8338945124678818 >5k 0.0012328529138167432 1.7683263120812778 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 5815 0.8904508146514762 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 5593 0.856455959818694 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGCT 3594 0.5503491363469313 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3118 0.4774592674261914 No Hit TCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 2060 0.3154477520519417 TruSeq Adapter, Index 14 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 1563 0.23934215361999267 No Hit ACTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 1496 0.22908244517946832 TruSeq Adapter, Index 21 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 976 0.14945485728286168 No Hit ACCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 928 0.142104618400098 No Hit TGGCAAGGGAGAATTTGCAGTAGCATTAATTCAAGCCTACGTATTCACCCT 886 0.1356731593776798 No Hit GGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 828 0.12679162072767367 No Hit AGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 784 0.12005390175180693 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCC 714 0.1093348033811099 No Hit AAAAGAAGGGAAACTGATTATTCAAGGCCATGGCACTGTTACCAGAAAAAT 703 0.1076503736371432 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5312997672424353E-4 0.0 0.0 0.5846502511331618 0.0 2 1.5312997672424353E-4 0.0 0.0 3.0273796398382946 0.0 3 1.5312997672424353E-4 0.0 0.0 4.213218179590837 0.0 4 1.5312997672424353E-4 0.0 0.0 5.3661337743476665 0.0 5 1.5312997672424353E-4 0.0 0.0 8.462881293642043 0.0 6 1.5312997672424353E-4 0.0 0.0 9.890358936665441 0.0 7 1.5312997672424353E-4 0.0 0.0 11.394248438074237 0.0 8 1.5312997672424353E-4 0.0 0.0 13.714014455469803 0.0 9 1.5312997672424353E-4 0.0 0.0 14.471089060394462 0.0 10 1.5312997672424353E-4 0.0 0.0 16.298082812691412 0.0 11 1.5312997672424353E-4 0.0 0.0 18.83483400710523 0.0 12 1.5312997672424353E-4 0.0 0.0 20.877587896606638 0.0 13 1.5312997672424353E-4 0.0 0.0 21.677845154967535 0.0 14 1.5312997672424353E-4 0.0 0.0 21.993599166972928 0.0 15 1.5312997672424353E-4 0.0 0.0 22.60137204459145 0.0 16 1.5312997672424353E-4 0.0 0.0 23.843256155825063 0.0 17 1.5312997672424353E-4 0.0 0.0 25.40334435869166 0.0 18 1.5312997672424353E-4 0.0 0.0 27.15392625260321 0.0 19 1.5312997672424353E-4 0.0 0.0 28.11634815631508 0.0 20 1.5312997672424353E-4 0.0 0.0 28.990414063457063 0.0 21 1.5312997672424353E-4 0.0 0.0 30.078555678059537 0.0 22 1.5312997672424353E-4 0.0 0.0 31.177263261055984 0.0 23 1.5312997672424353E-4 0.0 0.0 32.21425946343256 0.0 24 1.5312997672424353E-4 0.0 0.0 33.10241332843317 0.0 25 1.5312997672424353E-4 0.0 0.0 33.806198701457795 0.0 26 1.5312997672424353E-4 0.0 0.0 34.483339458532406 0.0 27 3.0625995344848707E-4 0.0 0.0 35.134907509494056 0.0 28 3.0625995344848707E-4 0.0 0.0 35.75661521499449 0.0 29 3.0625995344848707E-4 0.0 0.0 36.461931887786356 0.0 30 3.0625995344848707E-4 0.0 0.0 37.2119625137817 0.0 31 3.0625995344848707E-4 0.0 0.0 37.95127404140634 0.0 32 3.0625995344848707E-4 0.0 0.0 38.615551880436115 0.0 33 3.0625995344848707E-4 0.0 0.0 39.265894891583976 0.0 34 3.0625995344848707E-4 0.0 0.0 39.91608477275511 0.0 35 3.0625995344848707E-4 0.0 0.0 40.60501653803749 0.0 36 3.0625995344848707E-4 0.0 0.0 41.22825554330516 0.0 37 3.0625995344848707E-4 0.0 0.0 41.83755972069092 0.0 38 7.656498836212177E-4 0.0 0.0 42.44701702805341 0.0 39 7.656498836212177E-4 0.0 0.0 43.051880436114175 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACA 25 3.888948E-5 45.000004 13 GCCCAAT 25 3.888948E-5 45.000004 9 CTGTACG 55 1.8189894E-12 45.000004 1 ATCTACG 25 3.888948E-5 45.000004 1 GTCGACA 25 3.888948E-5 45.000004 9 CGCGGTC 25 3.888948E-5 45.000004 19 TTGTCGA 25 3.888948E-5 45.000004 7 CGCGAAA 25 3.888948E-5 45.000004 29 AGGCGCC 25 3.888948E-5 45.000004 24 TGCGAAC 25 3.888948E-5 45.000004 1 GTCACAC 25 3.888948E-5 45.000004 27 GGACGTT 25 3.888948E-5 45.000004 8 GAACGAT 25 3.888948E-5 45.000004 43 CCGACGG 50 2.1827873E-11 45.000004 2 TTCGGTC 25 3.888948E-5 45.000004 14 ACGTAAG 50 2.1827873E-11 45.000004 1 CCGCGAA 25 3.888948E-5 45.000004 28 TTCGCGC 25 3.888948E-5 45.000004 21 TGTCGAC 25 3.888948E-5 45.000004 8 CGCCCAT 25 3.888948E-5 45.000004 33 >>END_MODULE