SRR2934779.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934779.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1248706
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	7883	0.6312935150467764	No Hit
CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	5847	0.4682447269413297	No Hit
CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT	4056	0.3248162497817741	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4039	0.3234548404508347	No Hit
TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	2643	0.21165910951016492	No Hit
ACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	2054	0.16449028033820612	No Hit
CGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG	1732	0.1387035859521777	No Hit
ACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG	1444	0.11563971022802806	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACGGT	35	1.2120472E-7	45.000004	20
GTATCCG	45	3.8562575E-10	45.000004	17
ATGCGCG	35	1.2120472E-7	45.000004	1
TTACACG	45	3.8562575E-10	45.000004	34
TCCGCTC	25	3.891001E-5	45.0	44
TCACCGA	20	7.033522E-4	45.0	40
ACGCATA	25	3.891001E-5	45.0	39
GCGGTAA	20	7.033522E-4	45.0	30
CCGGCCG	20	7.033522E-4	45.0	44
CGTTGTA	20	7.033522E-4	45.0	18
CCGGACA	25	3.891001E-5	45.0	19
CGCGCAA	20	7.033522E-4	45.0	18
ATCGTCG	25	3.891001E-5	45.0	28
AGACGAT	20	7.033522E-4	45.0	16
CACTCGA	20	7.033522E-4	45.0	33
CGCTCGT	20	7.033522E-4	45.0	21
CGGATCG	20	7.033522E-4	45.0	10
CCGAGTA	25	3.891001E-5	45.0	12
GACGGTA	20	7.033522E-4	45.0	35
GTCCGGT	20	7.033522E-4	45.0	26