SRR2934772.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934772.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	299560
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	807	0.26939511283215384	No Hit
GCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC	387	0.12918947790092136	No Hit
CCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC	384	0.12818800907998398	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	302	0.10081452797436238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAATG	20	7.024926E-4	45.000004	1
GGATGCG	20	7.024926E-4	45.000004	1
ATGCGAG	20	7.024926E-4	45.000004	1
ACCCAGT	20	7.024926E-4	45.000004	39
CGTTAGG	35	1.2078999E-7	45.0	2
TATTGCG	25	3.8838778E-5	45.0	1
TTTTACG	35	1.2078999E-7	45.0	1
ATAGCGG	30	2.16011E-6	44.999996	2
CGTTTTT	585	0.0	40.384617	1
ATTGCGG	40	3.4468212E-7	39.375004	2
CACGGGC	70	0.0	38.571426	4
TTGTACG	35	6.2328327E-6	38.571426	1
ATCGAGG	35	6.2328327E-6	38.571426	2
CAGCGGG	185	0.0	37.702705	3
ACACGGG	90	0.0	37.500004	3
CTCGTAC	30	1.1379081E-4	37.499996	29
CGTGCGG	30	1.1379081E-4	37.499996	2
TTTCGCG	30	1.1379081E-4	37.499996	1
ACGGGCC	30	1.1379081E-4	37.499996	5
ACGATGC	30	1.1379081E-4	37.499996	43