##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934772.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 299560 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.780568166644414 34.0 31.0 34.0 31.0 34.0 2 32.97710308452397 34.0 31.0 34.0 31.0 34.0 3 32.93652022967018 34.0 31.0 34.0 31.0 34.0 4 36.348264120710375 37.0 37.0 37.0 35.0 37.0 5 36.24492255307785 37.0 37.0 37.0 35.0 37.0 6 36.22813125918013 37.0 37.0 37.0 35.0 37.0 7 36.32451929496595 37.0 37.0 37.0 35.0 37.0 8 35.792121778608625 37.0 37.0 37.0 35.0 37.0 9 37.78265456002136 39.0 38.0 39.0 35.0 39.0 10 37.724759647482976 39.0 37.0 39.0 35.0 39.0 11 37.689584724262254 39.0 37.0 39.0 35.0 39.0 12 37.55366203765523 39.0 37.0 39.0 35.0 39.0 13 37.482854853785554 39.0 37.0 39.0 35.0 39.0 14 38.63826278541861 40.0 38.0 41.0 35.0 41.0 15 38.77837828815596 40.0 38.0 41.0 35.0 41.0 16 38.89520296434771 40.0 38.0 41.0 35.0 41.0 17 38.88317532380825 40.0 38.0 41.0 35.0 41.0 18 38.78387635198291 40.0 38.0 41.0 35.0 41.0 19 38.765412605154225 40.0 38.0 41.0 35.0 41.0 20 38.71102617171852 40.0 38.0 41.0 35.0 41.0 21 38.679726932834825 40.0 38.0 41.0 35.0 41.0 22 38.646117639204164 40.0 38.0 41.0 35.0 41.0 23 38.49814060622246 40.0 37.0 41.0 35.0 41.0 24 38.32424556015489 40.0 37.0 41.0 34.0 41.0 25 38.259250233676056 40.0 37.0 41.0 34.0 41.0 26 38.35400587528375 40.0 37.0 41.0 35.0 41.0 27 38.39391440779811 40.0 37.0 41.0 35.0 41.0 28 38.32232274001869 40.0 37.0 41.0 35.0 41.0 29 38.290082120443316 40.0 37.0 41.0 35.0 41.0 30 38.194959273601285 40.0 37.0 41.0 34.0 41.0 31 38.07773400988116 40.0 37.0 41.0 34.0 41.0 32 37.99427159834424 40.0 37.0 41.0 34.0 41.0 33 37.88251435438643 40.0 37.0 41.0 34.0 41.0 34 37.77535719054613 40.0 36.0 41.0 34.0 41.0 35 37.65465683001736 40.0 36.0 41.0 34.0 41.0 36 37.590796501535586 40.0 36.0 41.0 33.0 41.0 37 37.55060088129256 40.0 36.0 41.0 33.0 41.0 38 37.47529042595807 40.0 36.0 41.0 33.0 41.0 39 37.4646347977033 40.0 36.0 41.0 33.0 41.0 40 37.36385699025237 40.0 36.0 41.0 33.0 41.0 41 37.285592201896115 40.0 35.0 41.0 33.0 41.0 42 37.24099345707037 40.0 35.0 41.0 33.0 41.0 43 37.185201629055946 40.0 35.0 41.0 33.0 41.0 44 37.126255174255576 40.0 35.0 41.0 33.0 41.0 45 37.047449592736015 40.0 35.0 41.0 33.0 41.0 46 36.99778007744692 40.0 35.0 41.0 33.0 41.0 47 36.8686974228869 39.0 35.0 41.0 33.0 41.0 48 36.76719188142609 39.0 35.0 41.0 32.0 41.0 49 36.75632928294832 39.0 35.0 41.0 32.0 41.0 50 36.67299372412872 39.0 35.0 41.0 32.0 41.0 51 35.920296434771 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 2.0 12 6.0 13 4.0 14 13.0 15 14.0 16 38.0 17 53.0 18 69.0 19 133.0 20 232.0 21 360.0 22 562.0 23 811.0 24 1071.0 25 1477.0 26 1990.0 27 2203.0 28 2325.0 29 2295.0 30 2595.0 31 3220.0 32 4314.0 33 7074.0 34 16919.0 35 20978.0 36 16753.0 37 29027.0 38 62417.0 39 122476.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.94552009614101 21.93350247028976 25.51775938042462 10.603218053144612 2 34.70623581252504 24.36072906930164 23.30818533849646 17.62484977967686 3 32.62618507143811 23.836293230070773 26.068901054880488 17.46862064361063 4 29.354720256376016 25.83756175724396 25.37855521431433 19.4291627720657 5 25.114501268527174 29.852116437441584 25.569835759113367 19.46354653491788 6 26.447790092135133 34.416143677393514 24.70823875016691 14.427827480304448 7 81.40172252637201 6.1483509146748565 8.2985044732274 4.151422085725731 8 82.08939778341568 5.305114167445587 7.962344772332755 4.643143276805982 9 76.83402323407664 7.214247563092535 10.11950861263186 5.8322205901989586 10 41.737214581386034 25.206636400053412 18.411670449993323 14.644478568567232 11 31.7014955267726 25.615569501936175 24.017225263720125 18.665709707571104 12 27.793764187474963 23.287154493256775 28.781880090799838 20.13720122846842 13 26.29523300841234 24.212511683802912 30.343169982641204 19.149085325143545 14 22.00727734009881 26.652757377486978 31.293563893710775 20.04640138870343 15 20.71972225931366 25.763786887434904 33.78722125784484 19.729269595406596 16 25.612231272533048 25.746428094538658 29.728601949525974 18.912738683402324 17 25.294431833355592 25.327814127386834 27.442248631325945 21.935505407931633 18 26.164708238750165 24.544665509413807 30.126852717318737 19.163773534517293 19 25.34483909734277 26.882427560421952 27.997396181065564 19.775337161169716 20 25.53211376685806 27.976699158766188 27.782414207504342 18.708772866871413 21 24.321004139404458 26.891106956870075 30.06776605688343 18.720122846842035 22 23.491454132728002 24.552343437040992 30.05808519161437 21.89811723861664 23 22.049672853518494 25.879623447723326 30.344839097342767 21.72586460141541 24 22.71064227533716 25.952730671651757 29.675857924956606 21.66076912805448 25 22.803445052744024 26.68413673387635 28.025103485111497 22.487314728268124 26 21.248497796768596 27.65889971958873 28.40699692882895 22.685605554813726 27 20.763786887434904 26.52256643076512 30.373214047269325 22.340432634530643 28 19.6918814260916 27.420883963145947 29.66884764321004 23.21838696755241 29 21.42842836159701 26.869074642809455 30.109493924422488 21.59300307117105 30 23.090198958472428 25.481038856990253 29.95259714247563 21.47616504206169 31 23.162304713579918 27.181199092001602 28.238416343971156 21.41807985044732 32 23.86900787822139 26.576311924155426 27.856189077313392 21.698491120309786 33 23.808585926024836 25.68433702764054 27.64721591667779 22.85986112965683 34 21.448457738015755 25.934704232874882 29.724929897182534 22.891908131926826 35 21.4791694485245 26.903458405661635 29.34871144345039 22.268660702363466 36 23.031112298037122 27.314394445186274 29.19181466150354 20.46267859527307 37 21.356322606489517 28.62898918413673 27.701962878889034 22.31272533048471 38 22.25731072239284 28.616971558285485 26.218453732140475 22.9072639871812 39 22.802443583923086 25.68433702764054 27.283682734677527 24.229536653758846 40 24.320336493523833 24.45653625317132 28.242088396314596 22.981038856990253 41 21.548604620109494 24.35104820403258 28.32153825610896 25.778808919748965 42 21.347977032981706 25.229336359994658 30.11550273734811 23.307183869675523 43 21.641407397516357 24.883829616771262 30.137535051408733 23.337227934303645 44 21.636066230471357 25.724729603418346 28.04880491387368 24.590399252236615 45 21.72486313259447 24.43650687675257 28.250767792762723 25.58786219789024 46 22.376151689144077 25.05407931633062 28.13025771130992 24.43951128321538 47 19.953932434236883 26.341968220056085 30.576846040859927 23.12725330484711 48 20.936373347576446 25.719054613433034 30.47135799172119 22.87321404726933 49 22.765055414608092 23.836960875951398 30.213980504740285 23.184003204700225 50 20.347175857924956 24.93390305781813 29.369742288690077 25.34917879556683 51 20.576512217919614 24.93356923487782 28.223060488716783 26.26685805848578 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 118.0 1 267.0 2 416.0 3 1057.0 4 1698.0 5 1194.5 6 691.0 7 702.5 8 714.0 9 705.5 10 697.0 11 676.0 12 655.0 13 667.0 14 679.0 15 696.5 16 714.0 17 714.0 18 714.0 19 711.0 20 708.0 21 903.5 22 1099.0 23 1372.5 24 1646.0 25 1747.5 26 2129.5 27 2410.0 28 2938.0 29 3466.0 30 4208.5 31 4951.0 32 5655.0 33 6359.0 34 7341.5 35 8324.0 36 8995.0 37 9666.0 38 10315.5 39 10965.0 40 12623.0 41 14281.0 42 15516.5 43 16752.0 44 18775.0 45 20798.0 46 22420.5 47 24043.0 48 26450.5 49 28858.0 50 28829.0 51 28800.0 52 25997.5 53 23195.0 54 20690.5 55 18186.0 56 16941.0 57 15696.0 58 14629.0 59 13562.0 60 12262.5 61 10963.0 62 9668.5 63 8374.0 64 7134.0 65 5894.0 66 4924.0 67 3954.0 68 3390.5 69 2827.0 70 2362.0 71 1897.0 72 1577.0 73 1257.0 74 983.0 75 569.5 76 430.0 77 358.5 78 287.0 79 211.5 80 136.0 81 107.0 82 78.0 83 48.5 84 19.0 85 14.0 86 9.0 87 7.0 88 5.0 89 5.5 90 6.0 91 5.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 299560.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.669727442609585 #Duplication Level Percentage of deduplicated Percentage of total 1 66.79158238576021 23.824375391606697 2 10.718595033891095 7.64658726853208 3 4.333406080807177 4.63714241401617 4 2.7645921055065785 3.9444898757363926 5 2.1010756056678233 3.747239709524356 6 1.7830037481922387 3.8159554636301074 7 1.5848186476415929 3.9571034445138507 8 1.390685580222688 3.968430048392852 9 1.2582844803606064 4.039439801375561 >10 7.200290975417511 37.6282746543907 >50 0.05176484513092675 1.260904046733667 >100 0.020905033610566573 1.2435049202087587 >500 9.954777909793606E-4 0.2865529613387973 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 807 0.26939511283215384 No Hit GCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 387 0.12918947790092136 No Hit CCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCGTCTTCTGC 384 0.12818800907998398 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 302 0.10081452797436238 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07978368273467752 0.0 2 0.0 0.0 0.0 0.43230070770463347 0.0 3 0.0 0.0 0.0 0.724061957537722 0.0 4 0.0 0.0 0.0 1.075243690746428 0.0 5 0.0 0.0 0.0 2.0676992922953668 0.0 6 0.0 0.0 0.0 2.714314327680598 0.0 7 0.0 0.0 0.0 3.3048471090933367 0.0 8 0.0 0.0 0.0 4.192816130324476 0.0 9 0.0 0.0 0.0 4.561690479369743 0.0 10 0.0 0.0 0.0 5.406596341300574 0.0 11 0.0 0.0 0.0 6.750567498998532 0.0 12 0.0 0.0 0.0 7.699959941247163 0.0 13 0.0 0.0 0.0 8.148617973027106 0.0 14 0.0 0.0 0.0 8.305180932033648 0.0 15 0.0 0.0 0.0 8.62298037121111 0.0 16 0.0 0.0 0.0 9.241220456669783 0.0 17 0.0 0.0 0.0 9.984644144745626 0.0 18 0.0 0.0 0.0 10.802844171451461 0.0 19 0.0 0.0 0.0 11.318266791293897 0.0 20 0.0 0.0 0.0 11.836359994658833 0.0 21 0.0 0.0 0.0 12.493323541193751 0.0 22 0.0 0.0 0.0 13.171651755908666 0.0 23 0.0 0.0 0.0 13.827947656562959 0.0 24 0.0 0.0 0.0 14.368740819869142 0.0 25 0.0 0.0 0.0 14.84110028041127 0.0 26 0.0 0.0 0.0 15.27440245693684 0.0 27 0.0 0.0 0.0 15.787822139137402 0.0 28 0.0 0.0 0.0 16.272866871411402 0.0 29 0.0 0.0 0.0 16.801308585926026 0.0 30 0.0 0.0 0.0 17.346107624515955 0.0 31 0.0 0.0 0.0 17.842836159700894 0.0 32 0.0 0.0 0.0 18.34190145546802 0.0 33 0.0 0.0 0.0 18.844638803578583 0.0 34 0.0 0.0 0.0 19.374081986914142 0.0 35 0.0 0.0 0.0 19.920883963145947 0.0 36 0.0 0.0 0.0 20.429630124182133 0.0 37 0.0 0.0 0.0 20.948724796368005 0.0 38 0.0 0.0 0.0 21.537922286019494 0.0 39 0.0 0.0 0.0 22.310054746962212 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATG 20 7.024926E-4 45.000004 1 GGATGCG 20 7.024926E-4 45.000004 1 ATGCGAG 20 7.024926E-4 45.000004 1 ACCCAGT 20 7.024926E-4 45.000004 39 CGTTAGG 35 1.2078999E-7 45.0 2 TATTGCG 25 3.8838778E-5 45.0 1 TTTTACG 35 1.2078999E-7 45.0 1 ATAGCGG 30 2.16011E-6 44.999996 2 CGTTTTT 585 0.0 40.384617 1 ATTGCGG 40 3.4468212E-7 39.375004 2 CACGGGC 70 0.0 38.571426 4 TTGTACG 35 6.2328327E-6 38.571426 1 ATCGAGG 35 6.2328327E-6 38.571426 2 CAGCGGG 185 0.0 37.702705 3 ACACGGG 90 0.0 37.500004 3 CTCGTAC 30 1.1379081E-4 37.499996 29 CGTGCGG 30 1.1379081E-4 37.499996 2 TTTCGCG 30 1.1379081E-4 37.499996 1 ACGGGCC 30 1.1379081E-4 37.499996 5 ACGATGC 30 1.1379081E-4 37.499996 43 >>END_MODULE