##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934771.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 681963 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.253723442474154 33.0 31.0 34.0 30.0 34.0 2 32.42927842126333 34.0 31.0 34.0 31.0 34.0 3 32.439075140440174 34.0 31.0 34.0 30.0 34.0 4 35.9833685991762 37.0 35.0 37.0 35.0 37.0 5 35.86871575144106 37.0 35.0 37.0 35.0 37.0 6 35.806017335251326 37.0 35.0 37.0 35.0 37.0 7 36.119776292848734 37.0 35.0 37.0 35.0 37.0 8 35.960486126080156 37.0 35.0 37.0 35.0 37.0 9 37.692534638976014 39.0 38.0 39.0 35.0 39.0 10 37.40002023570194 39.0 37.0 39.0 35.0 39.0 11 37.25511647992633 39.0 37.0 39.0 34.0 39.0 12 37.08449138736266 39.0 37.0 39.0 34.0 39.0 13 36.99195117623683 39.0 37.0 39.0 33.0 39.0 14 38.15171644209437 40.0 37.0 41.0 33.0 41.0 15 38.248575069321944 40.0 37.0 41.0 34.0 41.0 16 38.34335440485774 40.0 37.0 41.0 34.0 41.0 17 38.34752325272779 40.0 37.0 41.0 34.0 41.0 18 38.33547861100969 40.0 37.0 41.0 34.0 41.0 19 38.29326664349826 40.0 37.0 41.0 34.0 41.0 20 38.23769324728761 40.0 36.0 41.0 34.0 41.0 21 38.15203757388597 40.0 36.0 41.0 34.0 41.0 22 38.09999956009344 40.0 36.0 41.0 34.0 41.0 23 37.94850600399142 40.0 36.0 41.0 34.0 41.0 24 37.71098871932935 39.0 35.0 41.0 33.0 41.0 25 37.62879950965082 39.0 35.0 41.0 33.0 41.0 26 37.78282546120537 39.0 36.0 41.0 34.0 41.0 27 37.85550682368398 40.0 36.0 41.0 34.0 41.0 28 37.83865400322305 40.0 36.0 41.0 34.0 41.0 29 37.871249613248814 40.0 36.0 41.0 34.0 41.0 30 37.74774437909388 40.0 36.0 41.0 34.0 41.0 31 37.63718999417857 40.0 36.0 41.0 33.0 41.0 32 37.54084019220984 40.0 35.0 41.0 33.0 41.0 33 37.40289722462949 40.0 35.0 41.0 33.0 41.0 34 37.316525969884 40.0 35.0 41.0 33.0 41.0 35 37.25542294816581 40.0 35.0 41.0 33.0 41.0 36 37.15943386957944 39.0 35.0 41.0 33.0 41.0 37 37.0464174742618 39.0 35.0 41.0 32.0 41.0 38 36.9515354938611 39.0 35.0 41.0 32.0 41.0 39 36.98992320697751 39.0 35.0 41.0 32.0 41.0 40 36.88968316462917 39.0 35.0 41.0 31.0 41.0 41 36.87838489771439 39.0 35.0 41.0 32.0 41.0 42 36.766001967848695 39.0 35.0 41.0 31.0 41.0 43 36.659755734548646 39.0 35.0 41.0 31.0 41.0 44 36.577176474383506 39.0 35.0 41.0 31.0 41.0 45 36.54985387770304 39.0 35.0 41.0 31.0 41.0 46 36.52178637257447 39.0 35.0 41.0 31.0 41.0 47 36.4273428323824 39.0 35.0 41.0 31.0 41.0 48 36.375835639176906 39.0 35.0 41.0 31.0 41.0 49 36.336770469952185 39.0 35.0 40.0 31.0 41.0 50 36.20082174546126 38.0 35.0 40.0 31.0 41.0 51 35.25982054744905 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 10.0 11 12.0 12 12.0 13 17.0 14 15.0 15 19.0 16 38.0 17 63.0 18 133.0 19 223.0 20 415.0 21 654.0 22 1070.0 23 1563.0 24 2404.0 25 3555.0 26 4893.0 27 5749.0 28 6350.0 29 7318.0 30 8895.0 31 11311.0 32 15096.0 33 21707.0 34 42706.0 35 64555.0 36 49071.0 37 77688.0 38 144164.0 39 212100.0 40 153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.13032965131539 21.890483794575367 25.99407885765064 11.985107696458606 2 31.161661263147707 24.603387573812654 26.248931393638657 17.98601976940098 3 30.172164765537136 25.074820774734114 27.31790434378405 17.435110115944706 4 26.889875257162043 26.830927777606707 28.03099288377815 18.2482040814531 5 24.6201040232388 29.927576716038846 26.806732916595184 18.645586344127175 6 25.69538230079931 33.7031481180064 25.831166793506394 14.770302787687895 7 81.56263609609319 5.07622847573842 8.674664167997385 4.686471260171007 8 82.6461259628455 3.6685274714317346 8.299863775600729 5.385482790122045 9 77.71242721379312 6.112501704637935 10.055824142952037 6.119246938616905 10 40.666575752643475 29.456583421681238 16.481392685526927 13.395448140148366 11 29.16433882776632 25.631889120084228 27.017448160677336 18.186323891472117 12 25.692156319331104 23.356399100830984 31.17515173110565 19.776292848732265 13 22.397402791647053 27.09883087498882 31.811989800033142 18.691776533330987 14 18.24923053010207 30.894931249935848 30.52511646526278 20.3307217546993 15 16.779649335814405 26.917882641726898 37.5018879323365 18.80058009012219 16 19.510589284169374 26.126050826804388 33.41178333721918 20.951576551807065 17 19.701068826314625 26.0081558676937 28.244787473807232 26.04598783218444 18 21.135457495494624 25.52748462893148 31.698493906560916 21.63856396901298 19 22.333469704368124 27.963393908467175 28.678242074716664 21.024894312448037 20 23.68618238819408 28.03685830462943 28.00826437797945 20.26869492919704 21 22.28258717848329 27.916763812699514 29.758066053436917 20.04258295538028 22 21.20320310632688 25.381728920777224 28.188186162592398 25.226881810303492 23 19.523053303478342 26.996919187697866 29.25305331814189 24.2269741906819 24 20.829575798100482 25.721776694630062 30.792286385038487 22.656361122230972 25 18.963638789787716 28.0842215780035 29.960716343848564 22.99142328836022 26 18.342344086116107 29.324904723570043 30.7450697471857 21.587681443128144 27 20.028066038773364 28.295523364170784 30.10573887439641 21.57067172265944 28 16.876722050903055 27.50251846507802 33.16690201667832 22.453857467340605 29 19.524226387648596 25.251223306836295 32.391053473575546 22.833496831939563 30 20.962134309339366 27.53859080331338 30.53963338186969 20.95964150547757 31 22.410160081998583 28.540404684711635 26.712739547453456 22.33669568583633 32 23.744836596706858 27.9696992358823 27.168776018640305 21.116688148770535 33 23.773870429920684 27.2963489221556 26.624025057077876 22.305755590845838 34 20.62223317100781 26.279724853107865 28.769449368954035 24.32859260693029 35 22.15618735913825 25.1171984403846 29.47124697380943 23.255367226667722 36 24.30454438144005 26.360814296376784 29.106564432381226 20.228076889801937 37 22.028467820101678 27.36482771059427 29.28868574981341 21.31801871949065 38 22.80548944737471 29.600432868058824 25.401378080629005 22.192699603937456 39 23.318860407382804 26.50876953735027 27.31453172679456 22.857838328472365 40 23.275016386519503 24.820261509788654 28.526474310189847 23.378247793501995 41 21.801036126593377 24.605000564546756 27.138275830213665 26.4556874786462 42 23.54159976421008 24.036641284057932 28.788365351199406 23.633393600532578 43 23.977987075545155 24.637113743707502 28.402127388142755 22.982771792604584 44 20.8911627170389 26.468884675561576 28.18671980737958 24.45323280001994 45 21.81540640767901 25.988506707841918 27.00542404793222 25.19066283654685 46 23.27486975099822 25.797440623611546 28.288338223627967 22.639351401762266 47 20.620180273709863 24.304984288003894 30.657235069937812 24.41760036834843 48 22.263231289674074 23.59482845843543 30.380973747842628 23.76096650404787 49 23.44188760973836 22.080083523592922 31.334691178260403 23.143337688408316 50 21.66701126014168 24.14808428023221 29.654394739890584 24.530509719735527 51 21.008031227500613 23.724014352684822 26.735614688773442 28.53233973104113 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 352.0 1 471.0 2 590.0 3 2406.5 4 4223.0 5 2861.5 6 1500.0 7 1477.5 8 1455.0 9 1583.5 10 1712.0 11 1638.0 12 1564.0 13 1566.0 14 1568.0 15 1543.0 16 1518.0 17 1536.0 18 1554.0 19 1553.0 20 1552.0 21 1841.0 22 2130.0 23 2246.0 24 2362.0 25 3256.5 26 4798.5 27 5446.0 28 5794.5 29 6143.0 30 7613.0 31 9083.0 32 10420.0 33 11757.0 34 14345.0 35 16933.0 36 18648.0 37 20363.0 38 23247.0 39 26131.0 40 29697.5 41 33264.0 42 39313.0 43 45362.0 44 52141.5 45 58921.0 46 66365.5 47 73810.0 48 78607.0 49 83404.0 50 79725.5 51 76047.0 52 63219.5 53 50392.0 54 43871.5 55 37351.0 56 31449.5 57 25548.0 58 22742.5 59 19937.0 60 18866.5 61 17796.0 62 14902.5 63 12009.0 64 11241.0 65 10473.0 66 8009.5 67 5546.0 68 4668.5 69 3791.0 70 3266.5 71 2742.0 72 2221.5 73 1701.0 74 1154.0 75 593.5 76 580.0 77 495.0 78 410.0 79 258.0 80 106.0 81 79.0 82 52.0 83 35.0 84 18.0 85 12.0 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 681963.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.70438087222254 #Duplication Level Percentage of deduplicated Percentage of total 1 69.31184888716099 18.50930011640681 2 12.6249575432302 6.742833494601165 3 5.353400615143653 4.288777469651596 4 2.8297649743033917 3.022684866106912 5 1.673100720991922 2.233955944547921 6 1.0782402247009513 1.7276242579299008 7 0.7591415520329469 1.419068359899257 8 0.5219016445699078 1.1149648235547305 9 0.41901276624477374 1.007052885011159 >10 3.7788269760893454 23.61222980349505 >50 1.4581601854449084 27.632340799443384 >100 0.1860890141424906 6.662396980439822 >500 0.002777447972275979 0.46712283952096273 >1k 0.002777447972275979 1.5596473593913631 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 2813 0.4124857213661151 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2613 0.3831586171097259 No Hit CCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 2280 0.3343289885228377 No Hit CTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGCT 1696 0.24869384409418105 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 1112 0.1630586996655244 No Hit ACTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 854 0.12522673517478222 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2896051545318441 0.0 2 0.0 0.0 0.0 1.4994948406291837 0.0 3 0.0 0.0 0.0 2.1369194516418046 0.0 4 0.0 0.0 0.0 2.831092009390539 0.0 5 0.0 0.0 0.0 4.688084250905108 0.0 6 0.0 0.0 0.0 5.7051482265166875 0.0 7 0.0 0.0 0.0 6.768695662374645 0.0 8 0.0 0.0 0.0 8.532134441311332 0.0 9 0.0 0.0 0.0 9.18671540831394 0.0 10 0.0 0.0 0.0 10.613185759344715 0.0 11 0.0 0.0 0.0 12.66051090748325 0.0 12 0.0 0.0 0.0 14.25678519215852 0.0 13 0.0 0.0 0.0 14.867228867255262 0.0 14 0.0 0.0 0.0 15.061081026389994 0.0 15 0.0 0.0 0.0 15.481338430384053 0.0 16 0.0 0.0 0.0 16.45059922605772 0.0 17 0.0 0.0 0.0 17.712837793252714 0.0 18 0.0 0.0 0.0 19.255736748181352 0.0 19 0.0 0.0 0.0 20.01853472989004 0.0 20 0.0 0.0 0.0 20.758164299236174 0.0 21 0.0 0.0 0.0 21.661145839290402 0.0 22 0.0 0.0 0.0 22.62674074693202 0.0 23 0.0 0.0 0.0 23.5820711680839 0.0 24 0.0 0.0 0.0 24.287534660971343 0.0 25 0.0 0.0 0.0 24.899298055759623 0.0 26 0.0 0.0 0.0 25.472789579493316 0.0 27 0.0 0.0 0.0 25.997891381203967 0.0 28 0.0 0.0 0.0 26.577101690267654 0.0 29 0.0 0.0 0.0 27.17640106574697 0.0 30 0.0 0.0 0.0 27.913537831231313 0.0 31 0.0 0.0 0.0 28.58322225692596 0.0 32 0.0 0.0 0.0 29.159793126606576 0.0 33 1.4663552128194637E-4 0.0 0.0 29.757919417915634 0.0 34 1.4663552128194637E-4 0.0 0.0 30.328038324659843 0.0 35 1.4663552128194637E-4 0.0 0.0 30.97953994571553 0.0 36 1.4663552128194637E-4 0.0 0.0 31.58763745247176 0.0 37 1.4663552128194637E-4 0.0 0.0 32.16083570516289 0.0 38 1.4663552128194637E-4 0.0 0.0 32.74297872465222 0.0 39 1.4663552128194637E-4 0.0 0.0 33.35459548391921 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 45 3.8380676E-10 45.000004 1 GGCACGA 30 2.1641972E-6 45.000004 8 ACGATTG 30 2.1641972E-6 45.000004 1 ACGATAG 30 2.1641972E-6 45.000004 1 CGGTCTA 45 3.8380676E-10 45.000004 31 GAACCGA 30 2.1641972E-6 45.000004 9 GTACGCG 30 2.1641972E-6 45.000004 1 TCACGAC 55 1.8189894E-12 45.0 25 CCTTCGT 20 7.0312666E-4 45.0 13 CTTCGCA 25 3.8891318E-5 45.0 16 ACTATTC 25 3.8891318E-5 45.0 10 CAAACGT 25 3.8891318E-5 45.0 14 GCCCACG 20 7.0312666E-4 45.0 10 CGACGAG 20 7.0312666E-4 45.0 2 TCCGATC 40 6.8084773E-9 45.0 13 CGGCCTA 20 7.0312666E-4 45.0 21 GCGCGGC 20 7.0312666E-4 45.0 25 GGCCGCG 20 7.0312666E-4 45.0 8 GAATCGG 20 7.0312666E-4 45.0 2 TAAACCG 20 7.0312666E-4 45.0 1 >>END_MODULE