##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934769.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1636376 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06715327039751 33.0 31.0 34.0 30.0 34.0 2 32.24169261832244 34.0 31.0 34.0 30.0 34.0 3 32.25302131050565 34.0 31.0 34.0 30.0 34.0 4 35.839008883043995 37.0 35.0 37.0 35.0 37.0 5 35.71623331068165 37.0 35.0 37.0 33.0 37.0 6 35.639574278772116 37.0 35.0 37.0 33.0 37.0 7 36.020508122827515 37.0 35.0 37.0 35.0 37.0 8 35.84853542217681 37.0 35.0 37.0 35.0 37.0 9 37.56601844563841 39.0 38.0 39.0 35.0 39.0 10 37.189267014427 39.0 37.0 39.0 34.0 39.0 11 37.104061658200806 39.0 37.0 39.0 34.0 39.0 12 37.074473715087485 39.0 37.0 39.0 33.0 39.0 13 37.04421416593741 39.0 37.0 39.0 33.0 39.0 14 38.1133914210426 40.0 37.0 41.0 33.0 41.0 15 38.16382115112908 40.0 37.0 41.0 33.0 41.0 16 38.27187516805429 40.0 37.0 41.0 34.0 41.0 17 38.26614482246134 40.0 37.0 41.0 34.0 41.0 18 38.25675456007666 40.0 37.0 41.0 34.0 41.0 19 38.22689773010604 40.0 37.0 41.0 34.0 41.0 20 38.15734953335908 40.0 37.0 41.0 34.0 41.0 21 38.11687656137709 40.0 37.0 41.0 34.0 41.0 22 38.08426119669318 40.0 37.0 41.0 34.0 41.0 23 37.8876150713528 40.0 36.0 41.0 33.0 41.0 24 37.61602773445712 39.0 36.0 41.0 33.0 41.0 25 37.568622370408754 39.0 36.0 41.0 33.0 41.0 26 37.771506670838484 39.0 36.0 41.0 33.0 41.0 27 37.849755190738556 40.0 37.0 41.0 33.0 41.0 28 37.80686101482789 40.0 36.0 41.0 33.0 41.0 29 37.85456704327123 40.0 37.0 41.0 33.0 41.0 30 37.729867096559715 40.0 36.0 41.0 33.0 41.0 31 37.61382408444025 40.0 36.0 41.0 33.0 41.0 32 37.5502586202682 40.0 36.0 41.0 33.0 41.0 33 37.487903146954004 40.0 36.0 41.0 33.0 41.0 34 37.39549773401712 40.0 36.0 41.0 32.0 41.0 35 37.384750815216066 40.0 36.0 41.0 32.0 41.0 36 37.32940840002542 40.0 36.0 41.0 32.0 41.0 37 37.24433137616293 40.0 36.0 41.0 32.0 41.0 38 37.17569250587884 40.0 36.0 41.0 32.0 41.0 39 37.19470525111588 40.0 36.0 41.0 32.0 41.0 40 37.09564611067383 39.0 36.0 41.0 31.0 41.0 41 37.031952314138074 39.0 36.0 41.0 31.0 41.0 42 36.95398429211868 39.0 35.0 41.0 31.0 41.0 43 36.92472940204452 39.0 35.0 41.0 31.0 41.0 44 36.89372919182389 39.0 35.0 41.0 31.0 41.0 45 36.84442267547312 39.0 35.0 41.0 31.0 41.0 46 36.754566798828634 39.0 35.0 41.0 31.0 41.0 47 36.603553828704406 39.0 35.0 41.0 31.0 41.0 48 36.58179232645798 39.0 35.0 41.0 31.0 41.0 49 36.582507932162294 39.0 35.0 41.0 31.0 41.0 50 36.470703554684256 39.0 35.0 41.0 31.0 41.0 51 35.44576368756325 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 10.0 10 19.0 11 16.0 12 13.0 13 9.0 14 25.0 15 34.0 16 64.0 17 128.0 18 292.0 19 510.0 20 952.0 21 1656.0 22 2707.0 23 3985.0 24 5838.0 25 8534.0 26 11382.0 27 13208.0 28 15423.0 29 18378.0 30 23062.0 31 30208.0 32 40001.0 33 55284.0 34 91685.0 35 117208.0 36 126691.0 37 197674.0 38 371405.0 39 499692.0 40 280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.64800754838741 22.11863288144045 25.336108571624127 10.89725099854801 2 31.965391817039606 25.894476575065877 25.042716343920958 17.097415263973563 3 30.53754149413093 25.50911282003647 27.32587131563895 16.62747437019365 4 27.82306755904511 25.7995717365691 28.419446386405077 17.95791431798071 5 25.227514947664844 29.679303534151074 26.080252949199938 19.012928568984144 6 24.803590372872737 34.501422655917715 25.85322688673019 14.841760084479361 7 79.8062914635756 5.129566798828631 10.08252382093113 4.9816179166646295 8 80.19629962795837 4.804397033444636 9.04755386292637 5.951749475670629 9 74.92874498281569 6.4198570499689565 11.022222276542799 7.62917569067256 10 36.339753210753514 30.26706575994759 19.305220804998363 14.087960224300527 11 24.98215569037923 25.368313883850657 29.09789681589072 20.551633609879392 12 23.013965005597736 23.004126191046556 32.991684062831524 20.990224740524184 13 22.42522500941104 24.637430517191646 34.68609903836282 18.25124543503449 14 19.756950725261188 28.593733958454536 30.995443589981765 20.653871726302512 15 17.720743887712846 27.434464939598236 35.458965421150154 19.385825751538764 16 20.445362190596782 27.7827956410996 30.095650388419287 21.67619177988433 17 21.197695395190348 27.47088688663241 28.6851554899363 22.646262228240943 18 21.474709968858015 26.83001950651928 31.595427945655523 20.09984257896718 19 20.6716549252739 28.867326335756577 29.065752614313578 21.395266124655947 20 20.926119669318055 29.661153671283376 30.092655966599363 19.32007069279921 21 20.740526627132148 28.810737874424948 31.492823165336087 18.955912333106816 22 19.624462837391896 25.55983465902702 30.034417517734312 24.781284985846774 23 18.2418955056784 28.07050457840985 30.4375644717351 23.250035444176646 24 20.165903190953667 26.283506969058458 30.32438754907185 23.226202290916024 25 18.58778178120432 29.601265234884895 28.112854258434496 23.698098725476296 26 18.21323461111627 27.95543322561563 29.302434159386355 24.52889800388175 27 20.173480911477558 27.58687489916743 29.13676318890035 23.102881000454666 28 16.42147037111275 27.97492752276983 30.291143355805755 25.312458750311663 29 18.51579343622737 25.08763267121982 30.090883757767163 26.305690134785646 30 19.84012231907581 26.771536615056686 29.091113533808855 24.297227532058645 31 19.12683881944003 30.134027876233827 26.320662243885266 24.418471060440876 32 19.953910348232924 28.24546436760256 27.737451539255037 24.063173744909484 33 19.38625352608447 26.0507365055464 28.423846353160886 26.13916361520824 34 17.755760289811143 27.732868240551074 29.31117298224858 25.20019848738921 35 19.05197827394193 24.82351244457264 28.978181053743153 27.146328227742277 36 19.380875788938486 27.00363486142549 27.388204178012877 26.227285171623148 37 18.222706761771132 28.794421331038834 29.62577060528876 23.357101301901277 38 19.08791133578102 27.929400088977108 29.27896767002205 23.70372090521983 39 19.576796530870656 25.387135963861606 31.086437346917823 23.949630158349915 40 21.221772991048514 24.367627000151554 31.227786278948116 23.18281372985182 41 20.143658914577088 25.99873134291874 26.04108102294338 27.816528719560786 42 20.491256288285822 24.17323402445404 28.265569771250615 27.069939916009524 43 20.286413391543263 24.15875080054951 28.94114800021511 26.61368780769212 44 18.72625851271346 25.225070521689393 29.119163321877124 26.929507643720026 45 19.57850762905347 23.42878409363129 29.361222604095882 27.63148567321936 46 21.90902335404577 25.013016568319262 28.30266393542804 24.775296142206926 47 17.96048096525493 24.906745149036652 31.503884192874988 25.628889692833432 48 18.993923157025037 24.57442543767447 29.588493109163178 26.84315829613732 49 20.530122661295447 21.781729871374306 32.624714613267365 25.063432854062878 50 19.291959794081556 22.2637095630833 31.485001002214652 26.959329640620496 51 18.81254674964678 22.256192953208796 28.20030359770615 30.730956699438273 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 601.0 1 897.5 2 1194.0 3 4343.5 4 7493.0 5 5122.5 6 2752.0 7 2812.5 8 2873.0 9 2893.0 10 2913.0 11 3102.0 12 3291.0 13 3306.5 14 3322.0 15 3358.0 16 3394.0 17 3521.5 18 3649.0 19 3899.0 20 4149.0 21 4130.5 22 4112.0 23 4728.5 24 5345.0 25 6124.5 26 9165.5 27 11427.0 28 13879.0 29 16331.0 30 19657.0 31 22983.0 32 27624.0 33 32265.0 34 37069.0 35 41873.0 36 46099.5 37 50326.0 38 58094.0 39 65862.0 40 72744.5 41 79627.0 42 94016.0 43 108405.0 44 121506.0 45 134607.0 46 165440.0 47 196273.0 48 210887.0 49 225501.0 50 214488.5 51 203476.0 52 168512.5 53 133549.0 54 110243.5 55 86938.0 56 72191.5 57 57445.0 58 49291.0 59 41137.0 60 34652.5 61 28168.0 62 23304.5 63 18441.0 64 15356.5 65 12272.0 66 9818.0 67 7364.0 68 5818.5 69 4273.0 70 3265.0 71 2257.0 72 1991.5 73 1726.0 74 1298.5 75 687.5 76 504.0 77 372.0 78 240.0 79 175.0 80 110.0 81 75.5 82 41.0 83 42.5 84 44.0 85 40.5 86 37.0 87 21.5 88 6.0 89 4.0 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1636376.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.79454118203367 #Duplication Level Percentage of deduplicated Percentage of total 1 67.47495948181286 19.429104995551135 2 13.220143587647065 7.613359379338035 3 5.763823194951194 4.978999330589491 4 2.9518774869347557 3.399918314474435 5 1.822189684882549 2.623455796141376 6 1.2103431052600393 2.091076463328043 7 0.8705434914193279 1.7546830290097644 8 0.6529091707708695 1.5040176004711403 9 0.510173663782793 1.322119491460437 >10 4.585857309677113 29.8803001675643 >50 0.8420016568223085 15.937317287180653 >100 0.08419607459116413 4.499872797873785 >500 0.007536729425067313 1.4941287417068763 >1k 0.0027993566435964303 2.2177243102722266 >5k 6.460053792914839E-4 1.2539222950383102 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 8984 0.5490180740856625 Illumina PCR Primer Index 10 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 6142 0.37534160853006887 Illumina PCR Primer Index 10 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGC 5097 0.31148097992148505 No Hit GAATCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 4733 0.28923670354490655 No Hit CTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCT 4708 0.28770893731025143 Illumina PCR Primer Index 10 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCG 4581 0.27994788483820343 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4546 0.2778090121096863 No Hit TCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 3502 0.21400949415048864 Illumina PCR Primer Index 10 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2713 0.1657931917847732 Illumina PCR Primer Index 10 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 2426 0.14825443541093244 Illumina PCR Primer Index 10 (95% over 23bp) ACCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 1688 0.10315477616391341 Illumina PCR Primer Index 10 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.111064938620464E-5 0.0 0.0 0.3073254557632231 0.0 2 6.111064938620464E-5 0.0 0.0 1.6898316768273307 0.0 3 6.111064938620464E-5 0.0 0.0 2.4886089749544116 0.0 4 6.111064938620464E-5 0.0 0.0 3.3689078793626894 0.0 5 6.111064938620464E-5 0.0 0.0 5.901333189927009 0.0 6 6.111064938620464E-5 0.0 0.0 7.193823424445237 0.0 7 6.111064938620464E-5 0.0 0.0 8.595701721364772 0.0 8 6.111064938620464E-5 0.0 0.0 10.71226906285597 0.0 9 6.111064938620464E-5 0.0 0.0 11.438263577564081 0.0 10 6.111064938620464E-5 0.0 0.0 13.302871711635957 0.0 11 6.111064938620464E-5 0.0 0.0 15.739475523962708 0.0 12 6.111064938620464E-5 0.0 0.0 17.950886593301295 0.0 13 6.111064938620464E-5 0.0 0.0 18.68195329190846 0.0 14 1.2222129877240929E-4 0.0 0.0 18.950290153363287 0.0 15 1.2222129877240929E-4 0.0 0.0 19.467652911066896 0.0 16 1.2222129877240929E-4 0.0 0.0 20.5972221543215 0.0 17 1.2222129877240929E-4 0.0 0.0 22.111177382215335 0.0 18 1.2222129877240929E-4 0.0 0.0 23.67096559714882 0.0 19 1.2222129877240929E-4 0.0 0.0 24.71241328398852 0.0 20 1.8333194815861392E-4 0.0 0.0 25.613795362435038 0.0 21 2.4444259754481857E-4 0.0 0.0 26.724175861782378 0.0 22 2.4444259754481857E-4 0.0 0.0 27.977433059394663 0.0 23 2.4444259754481857E-4 0.0 0.0 29.175446229961818 0.0 24 2.4444259754481857E-4 0.0 0.0 30.113433587390674 0.0 25 2.4444259754481857E-4 0.0 0.0 30.92871076085203 0.0 26 2.4444259754481857E-4 0.0 0.0 31.669921827257305 0.0 27 2.4444259754481857E-4 0.0 0.0 32.452138139400724 0.0 28 2.4444259754481857E-4 0.0 0.0 33.210521298283524 0.0 29 0.0032388644174688457 0.0 0.0 34.00654861718822 0.0 30 0.0032388644174688457 0.0 0.0 34.884219763672895 0.0 31 0.003361085716241255 0.0 0.0 35.688802573491664 0.0 32 0.003361085716241255 0.0 0.0 36.44877460925851 0.0 33 0.003361085716241255 0.0 0.0 37.20868553437596 0.0 34 0.00342219636562746 0.0 0.0 37.9239245747921 0.0 35 0.00342219636562746 0.0 0.0 38.693368761213804 0.0 36 0.00342219636562746 0.0 0.0 39.39901342967631 0.0 37 0.00342219636562746 0.0 0.0 40.11584134697649 0.0 38 0.0034833070150136645 0.0 0.0 40.855524647147114 0.0 39 0.003544417664399869 0.0 0.0 41.68589615100686 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATTG 30 2.1660671E-6 45.000004 1 TCGATAG 60 0.0 45.000004 1 ATCGCTC 30 2.1660671E-6 45.000004 20 TCGCACG 25 3.8915336E-5 45.0 1 GATCGGT 20 7.0341636E-4 45.0 9 CCGGCCG 25 3.8915336E-5 45.0 20 CGTAGAT 20 7.0341636E-4 45.0 33 CGACTCG 20 7.0341636E-4 45.0 44 CCCGCGT 25 3.8915336E-5 45.0 11 TGTCCGA 20 7.0341636E-4 45.0 20 ACGCGCC 25 3.8915336E-5 45.0 32 CGTTTTT 2880 0.0 42.343754 1 AGTTGCG 115 0.0 41.08696 1 TTGTCGC 50 1.0822987E-9 40.5 38 GTTGTCG 50 1.0822987E-9 40.5 37 GCGATAC 100 0.0 40.5 9 CGAGTGC 45 1.9292202E-8 40.000004 11 CGATTCG 45 1.9292202E-8 40.000004 10 TACGCGG 90 0.0 40.000004 2 ACGTCCG 45 1.9292202E-8 40.000004 1 >>END_MODULE