SRR2934767.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934767.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	728403
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	7629	1.0473597719943493	No Hit
CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	7290	1.0008196012372272	No Hit
CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT	5281	0.7250107426795331	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3764	0.5167469107073969	No Hit
TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	3547	0.48695570995726273	No Hit
ACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	2790	0.38302972393029683	No Hit
CGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG	2374	0.32591848193925615	No Hit
GCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG	1236	0.16968628630030355	No Hit
ACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG	1195	0.1640575340848404	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC	1121	0.15389832276912643	No Hit
AAAACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC	1115	0.15307460293271719	No Hit
CGTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC	979	0.13440361997410774	No Hit
GGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG	975	0.13385447341650158	No Hit
AGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG	941	0.12918672767684922	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	894	0.12273425562497682	No Hit
AGCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCT	762	0.10461241922397355	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTCGTT	35	1.2111013E-7	45.000004	8
ATTACCG	35	1.2111013E-7	45.000004	1
CACGACA	35	1.2111013E-7	45.000004	12
CTGTTAT	35	1.2111013E-7	45.000004	13
CTCGCGC	35	1.2111013E-7	45.000004	33
TGCGTCG	35	1.2111013E-7	45.000004	1
TGATCGG	40	6.8084773E-9	45.0	2
CTTCGTC	20	7.031583E-4	45.0	12
AACGTTT	20	7.031583E-4	45.0	11
CTTAACG	25	3.8893944E-5	45.0	1
TCGTTTG	20	7.031583E-4	45.0	16
TGCCCGA	25	3.8893944E-5	45.0	9
TTAATCG	20	7.031583E-4	45.0	1
GTCGACT	20	7.031583E-4	45.0	9
CGTGCTA	20	7.031583E-4	45.0	16
CGAAAAG	20	7.031583E-4	45.0	2
CGACGGC	20	7.031583E-4	45.0	16
CGCGGAG	25	3.8893944E-5	45.0	30
GGGTCGA	50	2.1827873E-11	45.0	7
TCCGACA	20	7.031583E-4	45.0	18