##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934767.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 728403 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.927207878056514 33.0 31.0 34.0 30.0 34.0 2 32.12242398781993 33.0 31.0 34.0 30.0 34.0 3 32.133008787717785 34.0 31.0 34.0 30.0 34.0 4 35.74206860762517 37.0 35.0 37.0 33.0 37.0 5 35.60724900913368 37.0 35.0 37.0 33.0 37.0 6 35.5345241576435 37.0 35.0 37.0 33.0 37.0 7 35.94093654199667 37.0 35.0 37.0 35.0 37.0 8 35.795488211882706 37.0 35.0 37.0 35.0 37.0 9 37.56231509205755 39.0 37.0 39.0 35.0 39.0 10 37.184654648594254 39.0 37.0 39.0 34.0 39.0 11 37.06400989562097 39.0 37.0 39.0 33.0 39.0 12 36.96722144197649 39.0 35.0 39.0 33.0 39.0 13 36.79646020128967 39.0 35.0 39.0 33.0 39.0 14 37.80771221425502 40.0 37.0 41.0 33.0 41.0 15 37.89177556929337 40.0 37.0 41.0 33.0 41.0 16 38.022516381728245 40.0 37.0 41.0 33.0 41.0 17 38.034475420886515 40.0 37.0 41.0 34.0 41.0 18 38.02726512658515 39.0 37.0 41.0 34.0 41.0 19 38.003445894648976 40.0 37.0 41.0 34.0 41.0 20 37.91179882565009 39.0 36.0 41.0 34.0 41.0 21 37.83698035290904 39.0 36.0 41.0 34.0 41.0 22 37.77201082367865 39.0 36.0 41.0 33.0 41.0 23 37.570489138567524 39.0 35.0 41.0 33.0 41.0 24 37.30374119821033 39.0 35.0 41.0 32.0 41.0 25 37.21773798295724 39.0 35.0 40.0 32.0 41.0 26 37.381050050590126 39.0 35.0 41.0 33.0 41.0 27 37.51032738744898 39.0 35.0 41.0 33.0 41.0 28 37.519566778280705 39.0 36.0 41.0 33.0 41.0 29 37.526896511958356 39.0 36.0 41.0 33.0 41.0 30 37.37953440609113 39.0 36.0 41.0 33.0 41.0 31 37.28435769759323 39.0 35.0 41.0 33.0 41.0 32 37.135872587015704 39.0 35.0 41.0 32.0 41.0 33 36.96937272361591 39.0 35.0 41.0 32.0 41.0 34 36.9368454001425 39.0 35.0 41.0 32.0 41.0 35 36.85369911985536 39.0 35.0 41.0 31.0 41.0 36 36.736224315385854 39.0 35.0 41.0 31.0 41.0 37 36.69256990978895 39.0 35.0 41.0 31.0 41.0 38 36.62475854712295 39.0 35.0 41.0 31.0 41.0 39 36.654862761410925 39.0 35.0 41.0 31.0 41.0 40 36.561778301297494 39.0 35.0 40.0 31.0 41.0 41 36.51248278768759 39.0 35.0 40.0 31.0 41.0 42 36.40450410006549 39.0 35.0 40.0 30.0 41.0 43 36.35189585984681 39.0 35.0 40.0 30.0 41.0 44 36.30007427207192 39.0 35.0 40.0 30.0 41.0 45 36.29652678530978 39.0 35.0 40.0 30.0 41.0 46 36.24228620694863 39.0 35.0 40.0 30.0 41.0 47 36.09874753398874 39.0 35.0 40.0 30.0 41.0 48 36.09816955723686 39.0 35.0 40.0 30.0 41.0 49 36.09887246483059 39.0 35.0 40.0 30.0 41.0 50 35.9939429134696 39.0 35.0 40.0 29.0 41.0 51 35.0596908579454 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 3.0 11 5.0 12 3.0 13 4.0 14 10.0 15 19.0 16 36.0 17 82.0 18 133.0 19 297.0 20 592.0 21 930.0 22 1481.0 23 2152.0 24 3253.0 25 4852.0 26 6299.0 27 7473.0 28 8088.0 29 9173.0 30 11059.0 31 14370.0 32 18926.0 33 26542.0 34 47275.0 35 65402.0 36 58931.0 37 91146.0 38 165500.0 39 184281.0 40 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.79447091788474 24.235759600111475 25.94470368738185 14.025065794621932 2 29.1496602842108 25.137183674421987 26.752223700341705 18.960932341025504 3 29.709652486329684 25.00085804149626 28.839667052442124 16.449822419731934 4 27.428634972673095 25.113707659084326 29.37426122627172 18.08339614197086 5 22.566765924906953 28.471464285567194 29.819344511211515 19.14242527831434 6 23.063606272901126 32.44083289058392 28.320037122307294 16.175523714207657 7 74.33687121003071 5.655660396785845 13.158787099998214 6.848681293185228 8 73.08152217934303 4.025381553892557 13.408099637151413 9.484996629613002 9 68.94658588720804 5.276200125479988 16.606741048567894 9.170472938744075 10 35.695899110794436 22.74482669621075 24.521864956624288 17.037409236370525 11 25.670816841775775 25.960491650913024 27.332259751813215 21.036431755497986 12 24.577740618860712 21.40394808917591 33.876439278805826 20.141872013157553 13 20.144892319224386 26.60656257593667 35.04392486027652 18.20462024456242 14 15.996364649788648 30.285707225258545 31.89347105928998 21.824457065662827 15 13.921002521955566 26.17040292255798 40.9431317553607 18.965462800125753 16 15.167977067639754 25.77034965534189 35.88604110636557 23.175632170652786 17 15.152326390747978 25.87866881382971 30.046553899421063 28.92245089600125 18 16.116353172625594 27.02624783258718 34.95098180540168 21.906417189385547 19 19.187592582677446 27.699501512212333 29.625907636294745 23.486998268815476 20 19.603021953506506 28.222975468250404 31.15280963971867 21.021192938524415 21 18.444048143678703 29.371790066762493 32.5459944563655 19.6381673331933 22 16.767229130028294 26.701015783844934 28.297659400084846 28.234095686041933 23 16.20394204856378 27.70183538508216 30.798884683341505 25.295337883012564 24 20.340113920453376 23.530243560226964 31.35764130570577 24.77200121361389 25 16.154656145018624 28.021164108330144 28.934806693547387 26.889373053103842 26 16.342189694441124 30.57071428865614 29.728598042567096 23.358497974335634 27 22.24016100977069 28.525280648212597 27.760182206827817 21.474376135188898 28 15.274511499815349 26.419029026514167 31.536113936927773 26.770345536742713 29 17.21615644087133 26.06428035030059 31.789270499984212 24.93029270884387 30 22.142550209156195 27.963503719781496 26.968862017317335 22.925084053744975 31 18.773398791603 28.384149982907815 23.411627903784034 29.43082332170516 32 18.748000763313716 29.601333327841868 25.670816841775775 25.979849067068645 33 19.955985903407868 29.806302280468365 24.324858629083078 25.912853187040692 34 15.309519592862742 26.37303800231465 27.650078322027777 30.66736408279483 35 16.719178806237757 26.28380168670365 26.016504599788853 30.98051490726974 36 21.16850150260227 30.090073764111352 24.176863631808214 24.564561101478166 37 17.885840667872046 25.172329054108783 29.914209579037976 27.0276206989812 38 15.772175567645933 28.321135415422503 27.431929852018733 28.47475916491283 39 18.449539609254767 27.96830875216055 29.144855251831746 24.437296386752937 40 20.797415716299906 23.81538791026396 28.940572732402252 26.446623641033877 41 17.309236782385575 26.82471104594572 23.787106862547244 32.07894530912146 42 20.422211330815497 25.715709572860078 26.8855290272006 26.97655006912382 43 23.19842175279344 24.170411159756345 28.19826387315813 24.432903214292086 44 18.717523129366572 24.290125109314488 27.852713401784452 29.139638359534487 45 19.262825661069492 22.613855242221682 27.469134531296547 30.65418456541228 46 22.550154241539367 23.851357009787165 27.804937651272716 25.79355109740075 47 16.40328224897481 23.759786821306335 31.858051106324382 27.978879823394465 48 16.943779748298677 22.603284170987763 29.941392333639484 30.51154374707408 49 19.897364508383408 20.149971924882244 33.837861733134 26.114801833600353 50 19.104396879200113 19.650934990657646 32.001790217777796 29.242877912364445 51 17.298802997791057 19.374165125624142 26.588852599453872 36.738179277130925 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1026.0 1 1021.0 2 1016.0 3 3329.5 4 5643.0 5 3766.5 6 1890.0 7 1983.5 8 2077.0 9 2218.5 10 2360.0 11 2426.5 12 2493.0 13 2595.0 14 2697.0 15 2679.0 16 2661.0 17 2509.5 18 2358.0 19 2330.0 20 2302.0 21 2547.0 22 2792.0 23 2655.0 24 2518.0 25 2540.5 26 3128.5 27 3694.0 28 4527.0 29 5360.0 30 5546.0 31 5732.0 32 7592.0 33 9452.0 34 10383.5 35 11315.0 36 12963.0 37 14611.0 38 16754.0 39 18897.0 40 23622.5 41 28348.0 42 35350.0 43 42352.0 44 51782.5 45 61213.0 46 78305.0 47 95397.0 48 109829.5 49 124262.0 50 117365.5 51 110469.0 52 85953.5 53 61438.0 54 48655.0 55 35872.0 56 28279.0 57 20686.0 58 18395.5 59 16105.0 60 13639.0 61 11173.0 62 9536.5 63 7900.0 64 6029.5 65 4159.0 66 3165.5 67 2172.0 68 1791.5 69 1411.0 70 1106.0 71 801.0 72 725.5 73 650.0 74 472.5 75 229.0 76 163.0 77 102.0 78 41.0 79 35.5 80 30.0 81 16.5 82 3.0 83 2.5 84 2.0 85 3.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 728403.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.82506154075527 #Duplication Level Percentage of deduplicated Percentage of total 1 64.37491033474318 16.624860210753454 2 12.719016161822422 6.5693875023385 3 6.222289972744863 4.820730644116817 4 3.735104419691363 3.8583720599870586 5 2.4431133914177243 3.154677684220303 6 1.65058123809326 2.5575817231064684 7 1.2360392089869428 2.2344552047211987 8 0.9501738776444211 1.9630639091668196 9 0.6664859341027642 1.5490836237826484 >10 4.95658427129539 26.88141556205381 >50 0.8707019144254254 15.20780874505639 >100 0.15889504726857087 7.626223945975672 >500 0.010199344250347455 1.7755844522014945 >1k 0.0042944607369884025 2.37641073388804 >5k 0.0016104227763706505 2.800343998631339 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 7629 1.0473597719943493 No Hit CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 7290 1.0008196012372272 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 5281 0.7250107426795331 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3764 0.5167469107073969 No Hit TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 3547 0.48695570995726273 No Hit ACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 2790 0.38302972393029683 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG 2374 0.32591848193925615 No Hit GCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG 1236 0.16968628630030355 No Hit ACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG 1195 0.1640575340848404 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC 1121 0.15389832276912643 No Hit AAAACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 1115 0.15307460293271719 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 979 0.13440361997410774 No Hit GGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG 975 0.13385447341650158 No Hit AGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG 941 0.12918672767684922 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 894 0.12273425562497682 No Hit AGCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCT 762 0.10461241922397355 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3728663940154007E-4 0.0 0.0 0.7613917021209413 0.0 2 1.3728663940154007E-4 0.0 0.0 3.8443004765219255 0.0 3 1.3728663940154007E-4 0.0 0.0 5.2771611319558 0.0 4 1.3728663940154007E-4 0.0 0.0 6.812712193662025 0.0 5 1.3728663940154007E-4 0.0 0.0 10.819560051235374 0.0 6 1.3728663940154007E-4 0.0 0.0 12.871446163730791 0.0 7 1.3728663940154007E-4 0.0 0.0 15.04290893914495 0.0 8 1.3728663940154007E-4 0.0 0.0 18.47205461811662 0.0 9 1.3728663940154007E-4 0.0 0.0 19.547283577909482 0.0 10 1.3728663940154007E-4 0.0 0.0 22.0540003267422 0.0 11 1.3728663940154007E-4 0.0 0.0 25.721475611714943 0.0 12 1.3728663940154007E-4 0.0 0.0 28.543539771253002 0.0 13 1.3728663940154007E-4 0.0 0.0 29.643754899416944 0.0 14 1.3728663940154007E-4 0.0 0.0 30.029804929414073 0.0 15 1.3728663940154007E-4 0.0 0.0 30.77266293521581 0.0 16 1.3728663940154007E-4 0.0 0.0 32.41927888819788 0.0 17 1.3728663940154007E-4 0.0 0.0 34.39455905590724 0.0 18 1.3728663940154007E-4 0.0 0.0 36.742297876312975 0.0 19 1.3728663940154007E-4 0.0 0.0 37.895093787367706 0.0 20 1.3728663940154007E-4 0.0 0.0 39.00931215275061 0.0 21 1.3728663940154007E-4 0.0 0.0 40.56174947110322 0.0 22 1.3728663940154007E-4 0.0 0.0 42.00133717186777 0.0 23 1.3728663940154007E-4 0.0 0.0 43.52700359553709 0.0 24 1.3728663940154007E-4 0.0 0.0 44.51876227857381 0.0 25 1.3728663940154007E-4 0.0 0.0 45.41908805976911 0.0 26 1.3728663940154007E-4 0.0 0.0 46.20326934403071 0.0 27 1.3728663940154007E-4 0.0 0.0 46.88956525439901 0.0 28 1.3728663940154007E-4 0.0 0.0 47.707930911871586 0.0 29 1.3728663940154007E-4 0.0 0.0 48.49966296130027 0.0 30 1.3728663940154007E-4 0.0 0.0 49.41261911332051 0.0 31 1.3728663940154007E-4 0.0 0.0 50.32530069206195 0.0 32 2.7457327880308014E-4 0.0 0.0 51.0608825059754 0.0 33 2.7457327880308014E-4 0.0 0.0 51.813625149814044 0.0 34 2.7457327880308014E-4 0.0 0.0 52.53506643986914 0.0 35 2.7457327880308014E-4 0.0 0.0 53.32652391601901 0.0 36 2.7457327880308014E-4 0.0 0.0 53.9935996968711 0.0 37 2.7457327880308014E-4 0.0 0.0 54.67509057486035 0.0 38 2.7457327880308014E-4 0.0 0.0 55.34985440751891 0.0 39 2.7457327880308014E-4 0.0 0.0 56.03134528550816 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGTT 35 1.2111013E-7 45.000004 8 ATTACCG 35 1.2111013E-7 45.000004 1 CACGACA 35 1.2111013E-7 45.000004 12 CTGTTAT 35 1.2111013E-7 45.000004 13 CTCGCGC 35 1.2111013E-7 45.000004 33 TGCGTCG 35 1.2111013E-7 45.000004 1 TGATCGG 40 6.8084773E-9 45.0 2 CTTCGTC 20 7.031583E-4 45.0 12 AACGTTT 20 7.031583E-4 45.0 11 CTTAACG 25 3.8893944E-5 45.0 1 TCGTTTG 20 7.031583E-4 45.0 16 TGCCCGA 25 3.8893944E-5 45.0 9 TTAATCG 20 7.031583E-4 45.0 1 GTCGACT 20 7.031583E-4 45.0 9 CGTGCTA 20 7.031583E-4 45.0 16 CGAAAAG 20 7.031583E-4 45.0 2 CGACGGC 20 7.031583E-4 45.0 16 CGCGGAG 25 3.8893944E-5 45.0 30 GGGTCGA 50 2.1827873E-11 45.0 7 TCCGACA 20 7.031583E-4 45.0 18 >>END_MODULE