Basic Statistics
Measure | Value |
---|---|
Filename | SRR2934766.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1065210 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC | 5553 | 0.5213056580392599 | No Hit |
CCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC | 4761 | 0.4469541217224772 | No Hit |
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 4482 | 0.420762103247247 | No Hit |
CTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGCT | 3923 | 0.36828418809436636 | No Hit |
TCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC | 2437 | 0.2287811792979788 | No Hit |
ACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC | 1839 | 0.17264201425071113 | No Hit |
CGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTG | 1629 | 0.1529275917424733 | No Hit |
ACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTG | 1083 | 0.101670093221055 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTAACGG | 70 | 0.0 | 45.000004 | 2 |
AACGCGA | 30 | 2.1653523E-6 | 45.000004 | 24 |
ACTCGAC | 30 | 2.1653523E-6 | 45.000004 | 1 |
CGCGTTG | 30 | 2.1653523E-6 | 45.000004 | 25 |
ACGCGAA | 25 | 3.8906124E-5 | 45.0 | 35 |
TCGCCTA | 20 | 7.033055E-4 | 45.0 | 41 |
TAATACG | 25 | 3.8906124E-5 | 45.0 | 1 |
TCGCAAA | 20 | 7.033055E-4 | 45.0 | 30 |
GCGGTTA | 20 | 7.033055E-4 | 45.0 | 20 |
GATTTCG | 20 | 7.033055E-4 | 45.0 | 9 |
TGAAACG | 20 | 7.033055E-4 | 45.0 | 1 |
TCTAGCG | 40 | 6.8139343E-9 | 45.0 | 1 |
CCCGTTG | 20 | 7.033055E-4 | 45.0 | 1 |
CCGTACG | 25 | 3.8906124E-5 | 45.0 | 23 |
CCGTACA | 25 | 3.8906124E-5 | 45.0 | 31 |
TCTACGA | 20 | 7.033055E-4 | 45.0 | 11 |
GTTCGGT | 20 | 7.033055E-4 | 45.0 | 11 |
TTAAGCG | 40 | 6.8139343E-9 | 45.0 | 1 |
GAACGTA | 25 | 3.8906124E-5 | 45.0 | 9 |
CTACCGT | 20 | 7.033055E-4 | 45.0 | 21 |