SRR2934766.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934766.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1065210
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC	5553	0.5213056580392599	No Hit
CCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC	4761	0.4469541217224772	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4482	0.420762103247247	No Hit
CTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGCT	3923	0.36828418809436636	No Hit
TCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC	2437	0.2287811792979788	No Hit
ACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC	1839	0.17264201425071113	No Hit
CGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTG	1629	0.1529275917424733	No Hit
ACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTG	1083	0.101670093221055	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAACGG	70	0.0	45.000004	2
AACGCGA	30	2.1653523E-6	45.000004	24
ACTCGAC	30	2.1653523E-6	45.000004	1
CGCGTTG	30	2.1653523E-6	45.000004	25
ACGCGAA	25	3.8906124E-5	45.0	35
TCGCCTA	20	7.033055E-4	45.0	41
TAATACG	25	3.8906124E-5	45.0	1
TCGCAAA	20	7.033055E-4	45.0	30
GCGGTTA	20	7.033055E-4	45.0	20
GATTTCG	20	7.033055E-4	45.0	9
TGAAACG	20	7.033055E-4	45.0	1
TCTAGCG	40	6.8139343E-9	45.0	1
CCCGTTG	20	7.033055E-4	45.0	1
CCGTACG	25	3.8906124E-5	45.0	23
CCGTACA	25	3.8906124E-5	45.0	31
TCTACGA	20	7.033055E-4	45.0	11
GTTCGGT	20	7.033055E-4	45.0	11
TTAAGCG	40	6.8139343E-9	45.0	1
GAACGTA	25	3.8906124E-5	45.0	9
CTACCGT	20	7.033055E-4	45.0	21