SRR2934765.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934765.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1242832
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	7422	0.5971844947667906	No Hit
CCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	7215	0.5805289854139578	No Hit
CTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGCT	5276	0.42451433500263913	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5221	0.4200889581214517	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG	3016	0.24267157588475355	No Hit
TCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	2976	0.23945311997116261	No Hit
ACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	2418	0.19455565997656965	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC	2076	0.16703786191536749	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC	1827	0.14700297385326416	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG	1670	0.1343705343924199	No Hit
GCCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG	1466	0.11795640923310632	No Hit
AGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG	1453	0.1169104110611893	No Hit
ACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG	1442	0.11602533568495178	No Hit
GGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG	1367	0.10999073084696886	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCC	1324	0.10653089073985865	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCATGCG	65	0.0	45.000004	1
CTACGCA	30	2.1656451E-6	45.000004	26
ACGGTCC	30	2.1656451E-6	45.000004	13
CGGCGAA	20	7.0335093E-4	45.0	21
TTTACGT	25	3.89099E-5	45.0	38
ACGTTCA	25	3.89099E-5	45.0	20
ACGTTAG	45	3.8562575E-10	45.0	1
CAGCCGT	25	3.89099E-5	45.0	27
TAACGTG	20	7.0335093E-4	45.0	40
TCGATGA	20	7.0335093E-4	45.0	1
ACCTCGT	20	7.0335093E-4	45.0	16
GTAATCG	25	3.89099E-5	45.0	1
ACGATAG	20	7.0335093E-4	45.0	1
CGGATTA	25	3.89099E-5	45.0	6
GATATCG	25	3.89099E-5	45.0	13
CGTACTA	20	7.0335093E-4	45.0	17
CTACCGT	25	3.89099E-5	45.0	22
TCGTACT	20	7.0335093E-4	45.0	16
ACGTCGT	20	7.0335093E-4	45.0	19
ACGTCAC	20	7.0335093E-4	45.0	40