##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934763.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 598447 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16528614898228 33.0 31.0 34.0 30.0 34.0 2 32.34704827662266 34.0 31.0 34.0 30.0 34.0 3 32.35173707947404 34.0 31.0 34.0 30.0 34.0 4 35.90721317008858 37.0 35.0 37.0 35.0 37.0 5 35.788901941191114 37.0 35.0 37.0 35.0 37.0 6 35.732223572012224 37.0 35.0 37.0 35.0 37.0 7 36.03566731891045 37.0 35.0 37.0 35.0 37.0 8 35.85107453124504 37.0 35.0 37.0 35.0 37.0 9 37.56952746024293 39.0 38.0 39.0 35.0 39.0 10 37.32626281024051 39.0 37.0 39.0 34.0 39.0 11 37.18465127237667 39.0 37.0 39.0 34.0 39.0 12 37.03208137061427 39.0 37.0 39.0 33.0 39.0 13 36.89915564786857 39.0 35.0 39.0 33.0 39.0 14 37.97911427411283 40.0 37.0 41.0 33.0 41.0 15 38.094130307278675 40.0 37.0 41.0 33.0 41.0 16 38.2125033628709 40.0 37.0 41.0 34.0 41.0 17 38.215517831988464 40.0 37.0 41.0 34.0 41.0 18 38.19897167167686 40.0 37.0 41.0 34.0 41.0 19 38.15812929131569 40.0 37.0 41.0 34.0 41.0 20 38.093563841075316 40.0 36.0 41.0 34.0 41.0 21 38.03624214007255 40.0 36.0 41.0 34.0 41.0 22 37.9595218958404 40.0 36.0 41.0 34.0 41.0 23 37.771486865169344 40.0 35.0 41.0 33.0 41.0 24 37.52884382409804 39.0 35.0 41.0 33.0 41.0 25 37.45323813136334 39.0 35.0 41.0 33.0 41.0 26 37.566800401706416 39.0 35.0 41.0 33.0 41.0 27 37.65588097191564 39.0 35.0 41.0 33.0 41.0 28 37.60076999299854 39.0 35.0 41.0 33.0 41.0 29 37.60523321196363 39.0 36.0 41.0 33.0 41.0 30 37.51340887330039 39.0 36.0 41.0 33.0 41.0 31 37.34694467513414 39.0 35.0 41.0 33.0 41.0 32 37.26999550503219 39.0 35.0 41.0 33.0 41.0 33 37.17431284641748 39.0 35.0 41.0 33.0 41.0 34 37.065870494797366 39.0 35.0 41.0 32.0 41.0 35 37.045928879249125 39.0 35.0 41.0 32.0 41.0 36 36.939632081036414 39.0 35.0 41.0 32.0 41.0 37 36.82933994154871 39.0 35.0 41.0 31.0 41.0 38 36.76898204853563 39.0 35.0 41.0 31.0 41.0 39 36.82939842625997 39.0 35.0 41.0 31.0 41.0 40 36.6985564302269 39.0 35.0 41.0 31.0 41.0 41 36.64015693954519 39.0 35.0 41.0 31.0 41.0 42 36.56211995381379 39.0 35.0 41.0 31.0 41.0 43 36.50760886093505 39.0 35.0 41.0 31.0 41.0 44 36.41746052699738 39.0 35.0 41.0 31.0 41.0 45 36.377309937220836 39.0 35.0 41.0 31.0 41.0 46 36.295680319226264 39.0 35.0 40.0 30.0 41.0 47 36.13241941224536 38.0 35.0 40.0 30.0 41.0 48 36.12475791507018 38.0 35.0 40.0 30.0 41.0 49 36.13026049090396 38.0 35.0 40.0 30.0 41.0 50 36.022834102268035 38.0 35.0 40.0 30.0 41.0 51 35.00617932749266 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 11.0 10 9.0 11 9.0 12 11.0 13 11.0 14 15.0 15 15.0 16 32.0 17 77.0 18 166.0 19 266.0 20 460.0 21 768.0 22 1169.0 23 1705.0 24 2405.0 25 3273.0 26 4456.0 27 5440.0 28 6121.0 29 7182.0 30 8704.0 31 11059.0 32 14597.0 33 20385.0 34 38756.0 35 57429.0 36 45793.0 37 69935.0 38 125352.0 39 172716.0 40 119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.27432170267375 21.63115530698625 25.452379241603683 13.642143748736313 2 31.253394201992823 26.02285582516079 26.071982982620014 16.65176699022637 3 31.392253616443895 24.782979946428004 28.047596529015934 15.777169908112162 4 27.560001136274394 25.791256368567307 27.916089478266247 18.732653016892055 5 25.103977461663273 29.757522387111973 25.262554578768043 19.875945572456708 6 24.817068178134406 34.214725781898814 24.964616749687107 16.003589290279674 7 78.2998327337258 5.682374546116866 10.575372589385527 5.442420130771814 8 78.11351715356581 5.160189624143825 9.930369773764427 6.795923448525934 9 73.1446560848329 6.724739199962569 12.375866200348568 7.754738514855952 10 39.38661234829483 26.983843180766215 19.595386057579034 14.034158413359913 11 28.848669974116337 24.399153141380943 27.366500291588057 19.38567659291466 12 27.24618888556547 21.61912416638399 31.702222586127093 19.432464361923447 13 22.543182604307482 25.95651745267334 32.57180669299036 18.928493250028826 14 17.43947250132426 32.09356885405057 29.387731912767546 21.079226731857624 15 16.294676053184325 25.872466567632557 38.4293011745401 19.403556204643017 16 17.805252595467934 25.57586553195187 35.02415418575078 21.59472768682941 17 17.625286783959147 24.85382999664131 29.74615964320984 27.774723576189704 18 19.13619752459282 26.221035446747997 32.62845331332599 22.014313715333188 19 21.1211686247905 28.061131562193474 29.185040613454493 21.632659199561534 20 23.704856069125587 27.391899366192828 28.326150853793237 20.57709371088835 21 21.533402289592896 27.7778984605153 30.06348097659442 20.625218273297385 22 19.12550317739081 25.829522079649493 28.40936624295886 26.635608500000835 23 18.258926855678116 27.855432477729856 28.933723454207303 24.95191721238472 24 21.223767518259763 25.86561550145627 29.91376011576631 22.99685686451766 25 18.8314086293356 27.646892707290704 28.70646857616464 24.81523008720906 26 17.810933967419 30.591681468868586 29.016270446672802 22.581114117039604 27 21.734923894680733 29.22597991133718 27.905562230239266 21.13353396374282 28 17.990398481402696 28.430086540662746 30.982359340091936 22.59715563784262 29 20.565396768636155 27.346448390584293 29.084112711735543 23.00404212904401 30 22.883062326321298 27.370677770963848 27.213604546434354 22.532655356280507 31 23.193532593529586 31.568710345277022 22.966277715486918 22.27147934570647 32 24.224367404298125 29.743486056409342 24.095701039523966 21.936445499768567 33 22.625228299247887 27.12153290099207 24.34818789299637 25.90505090676367 34 19.779529348463605 29.15696795204922 27.63603126091366 23.42747143857351 35 21.07237566568134 25.914909758090527 26.68105947560937 26.331655100618768 36 22.23354783297435 27.981091057353453 25.48462938238474 24.300731727287463 37 21.86225346605464 29.162482224825254 28.537865508557985 20.43739880056212 38 19.793565679166242 28.72601917964331 26.13364257820659 25.346772562983855 39 21.843872556801188 25.213761619658886 26.999550503219165 25.94281532032076 40 21.980225483626786 25.010234824470672 29.368682606813973 23.64085708508857 41 18.1773824582628 26.734865409969473 28.30258987011381 26.785162261653916 42 21.29729115527357 25.665430689768687 27.891860097886696 25.14541805707105 43 23.713043928702124 24.580789944640046 27.52791809466837 24.178248031989465 44 21.38167623866441 26.061789932943103 26.593833706242993 25.962700122149496 45 21.434312478799292 25.282439380596777 26.111752586277483 27.171495554326448 46 23.486457447359584 25.880320228859034 27.324892597005245 23.30832972677614 47 19.219245814583413 26.054938866766815 30.793704371481518 23.932110947168255 48 20.240890170725226 23.497485992911653 29.463260739881726 26.798363096481392 49 20.76959196052449 21.54125595081937 31.75001295018606 25.939139138470075 50 20.22651964167253 22.780797631202095 29.97140933115213 27.021273395973246 51 19.139038210568355 23.282262255471245 26.859855592892938 30.718843941067465 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 447.0 1 620.5 2 794.0 3 2596.5 4 4399.0 5 2979.5 6 1560.0 7 1559.0 8 1558.0 9 1532.5 10 1507.0 11 1534.5 12 1562.0 13 1516.5 14 1471.0 15 1452.5 16 1434.0 17 1423.0 18 1412.0 19 1424.0 20 1436.0 21 1414.0 22 1392.0 23 1694.5 24 1997.0 25 2793.0 26 3732.5 27 3876.0 28 5040.5 29 6205.0 30 7630.5 31 9056.0 32 9876.0 33 10696.0 34 12233.5 35 13771.0 36 15556.0 37 17341.0 38 18144.0 39 18947.0 40 22375.0 41 25803.0 42 31049.0 43 36295.0 44 42064.5 45 47834.0 46 57177.0 47 66520.0 48 72582.0 49 78644.0 50 74969.0 51 71294.0 52 57623.0 53 43952.0 54 36677.0 55 29402.0 56 25222.0 57 21042.0 58 20131.0 59 19220.0 60 18098.5 61 16977.0 62 14449.5 63 11922.0 64 10670.5 65 9419.0 66 7065.5 67 4712.0 68 3733.5 69 2755.0 70 2822.0 71 2889.0 72 2523.0 73 2157.0 74 1837.5 75 1148.0 76 778.0 77 649.0 78 520.0 79 315.0 80 110.0 81 93.0 82 76.0 83 76.0 84 76.0 85 77.0 86 78.0 87 40.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 598447.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.26549744967936 #Duplication Level Percentage of deduplicated Percentage of total 1 68.60297003000298 18.704941043934756 2 12.751223949424284 6.953369281466365 3 5.436514858219978 4.446878460058222 4 2.931492953289729 3.1971445456669647 5 1.7713850998303682 2.414884796091246 6 1.1552486463341232 1.8899057412221136 7 0.8071783872856854 1.540568418198191 8 0.6090269276856747 1.3284337714879855 9 0.45530547776454816 1.11727173085329 >10 4.100118656101379 26.637537362960373 >50 1.2600331030586358 22.893546481299502 >100 0.11145255948430195 5.348979969422621 >500 0.0018575426580716994 0.29814097418256374 >1k 0.006191808860238998 3.2283974231558132 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGC 3495 0.5840116167346482 Illumina PCR Primer Index 7 (96% over 27bp) GCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGC 3183 0.5318766741248598 Illumina PCR Primer Index 7 (96% over 27bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2778 0.46420150823715384 No Hit CTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGCT 2507 0.41891763180365177 Illumina PCR Primer Index 7 (96% over 28bp) TCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGC 1425 0.23811632441970634 Illumina PCR Primer Index 7 (96% over 27bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGC 1186 0.19817962158720825 No Hit ACTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTGC 1146 0.1914956545859533 Illumina PCR Primer Index 7 (96% over 27bp) CGCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTG 1144 0.19116145623589056 Illumina PCR Primer Index 7 (96% over 26bp) GAATCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTC 1133 0.18932336531054547 Illumina PCR Primer Index 7 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCG 1126 0.18815367108532585 No Hit AGCTGTCTCTTATACACATCTGACGCAGAGCATCTCGTATGCCGTCTTCTG 600 0.10025950501882372 Illumina PCR Primer Index 7 (96% over 26bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.3419835006274573E-4 0.0 0.0 0.44983097918445575 0.0 2 3.3419835006274573E-4 0.0 0.0 2.099099836744106 0.0 3 3.3419835006274573E-4 0.0 0.0 2.924235563049025 0.0 4 3.3419835006274573E-4 0.0 0.0 3.850132091897862 0.0 5 3.3419835006274573E-4 0.0 0.0 6.4014022962768635 0.0 6 3.3419835006274573E-4 0.0 0.0 7.7224883740748975 0.0 7 3.3419835006274573E-4 0.0 0.0 9.193629511051103 0.0 8 3.3419835006274573E-4 0.0 0.0 11.397166332189817 0.0 9 3.3419835006274573E-4 0.0 0.0 12.162313454658474 0.0 10 3.3419835006274573E-4 0.0 0.0 13.959799280470952 0.0 11 3.3419835006274573E-4 0.0 0.0 16.34630969826902 0.0 12 3.3419835006274573E-4 0.0 0.0 18.40948321238138 0.0 13 3.3419835006274573E-4 0.0 0.0 19.1238321856405 0.0 14 3.3419835006274573E-4 0.0 0.0 19.401718113717674 0.0 15 3.3419835006274573E-4 0.0 0.0 19.91755326703952 0.0 16 3.3419835006274573E-4 0.0 0.0 21.015060648645576 0.0 17 3.3419835006274573E-4 0.0 0.0 22.402652198106097 0.0 18 3.3419835006274573E-4 0.0 0.0 24.023514195910415 0.0 19 5.012975250941186E-4 0.0 0.0 24.870874112494505 0.0 20 5.012975250941186E-4 0.0 0.0 25.60794857355789 0.0 21 5.012975250941186E-4 0.0 0.0 26.56292035886219 0.0 22 5.012975250941186E-4 0.0 0.0 27.525077408692834 0.0 23 5.012975250941186E-4 0.0 0.0 28.50444567355171 0.0 24 5.012975250941186E-4 0.0 0.0 29.292485382999665 0.0 25 5.012975250941186E-4 0.0 0.0 29.902230272689145 0.0 26 5.012975250941186E-4 0.0 0.0 30.491589063024797 0.0 27 5.012975250941186E-4 0.0 0.0 31.04117824970298 0.0 28 5.012975250941186E-4 0.0 0.0 31.65810840391881 0.0 29 5.012975250941186E-4 0.0 0.0 32.25231307033037 0.0 30 5.012975250941186E-4 0.0 0.0 32.94560754753554 0.0 31 5.012975250941186E-4 0.0 0.0 33.58927356975639 0.0 32 5.012975250941186E-4 0.0 0.0 34.17061159969053 0.0 33 5.012975250941186E-4 0.0 0.0 34.757463902400715 0.0 34 5.012975250941186E-4 0.0 0.0 35.32025392390638 0.0 35 5.012975250941186E-4 0.0 0.0 35.940860259972894 0.0 36 5.012975250941186E-4 0.0 0.0 36.530051951133515 0.0 37 5.012975250941186E-4 0.0 0.0 37.07763594771133 0.0 38 5.012975250941186E-4 0.0 0.0 37.61653078718751 0.0 39 5.012975250941186E-4 0.0 0.0 38.14924295718752 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTA 30 2.1637516E-6 45.000004 38 GCGATCA 30 2.1637516E-6 45.000004 9 GTATCGG 60 0.0 45.000004 2 TCACGCG 20 7.0305733E-4 45.0 1 TCACGAC 55 1.8189894E-12 45.0 25 TCGCCAG 35 1.2106284E-7 45.0 25 TTGGCGT 25 3.888556E-5 45.0 19 GGTACGT 20 7.0305733E-4 45.0 9 CCCCTCG 20 7.0305733E-4 45.0 43 CCCTCGT 20 7.0305733E-4 45.0 14 CTCGTAG 25 3.888556E-5 45.0 1 CGACGGT 55 1.8189894E-12 45.0 28 GCGAAGA 20 7.0305733E-4 45.0 25 GCGAACC 20 7.0305733E-4 45.0 13 CGGTTTG 20 7.0305733E-4 45.0 44 TAGGTCG 20 7.0305733E-4 45.0 2 CGGTTAT 20 7.0305733E-4 45.0 18 GGCGTAG 35 1.2106284E-7 45.0 1 TAACGTG 20 7.0305733E-4 45.0 22 TCGATTT 25 3.888556E-5 45.0 12 >>END_MODULE