##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934761.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 925536 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11354609653217 33.0 31.0 34.0 30.0 34.0 2 32.285655015039936 34.0 31.0 34.0 30.0 34.0 3 32.290093524184904 34.0 31.0 34.0 30.0 34.0 4 35.87247173529717 37.0 35.0 37.0 35.0 37.0 5 35.75921628116032 37.0 35.0 37.0 35.0 37.0 6 35.687556183660064 37.0 35.0 37.0 33.0 37.0 7 36.05021954845625 37.0 35.0 37.0 35.0 37.0 8 35.88750950800401 37.0 35.0 37.0 35.0 37.0 9 37.59164095183764 39.0 38.0 39.0 35.0 39.0 10 37.316623016284616 39.0 37.0 39.0 34.0 39.0 11 37.1691074145144 39.0 37.0 39.0 34.0 39.0 12 36.93103671818276 39.0 35.0 39.0 33.0 39.0 13 36.73989342391868 39.0 35.0 39.0 33.0 39.0 14 37.768516837810736 40.0 36.0 41.0 33.0 41.0 15 37.905773519344464 40.0 36.0 41.0 33.0 41.0 16 38.039299389759016 40.0 36.0 41.0 34.0 41.0 17 38.05677899076859 40.0 36.0 41.0 34.0 41.0 18 38.021014849773536 40.0 36.0 41.0 34.0 41.0 19 38.007513484078416 40.0 36.0 41.0 34.0 41.0 20 37.93561136465789 40.0 36.0 41.0 34.0 41.0 21 37.830872056840576 39.0 35.0 41.0 34.0 41.0 22 37.7494640943194 39.0 35.0 41.0 33.0 41.0 23 37.59478507589116 39.0 35.0 41.0 33.0 41.0 24 37.3244671195934 39.0 35.0 41.0 33.0 41.0 25 37.265838389862736 39.0 35.0 41.0 33.0 41.0 26 37.41974812433012 39.0 35.0 41.0 33.0 41.0 27 37.51682160391384 39.0 35.0 41.0 33.0 41.0 28 37.50863823773467 39.0 35.0 41.0 33.0 41.0 29 37.51346463022508 39.0 35.0 41.0 33.0 41.0 30 37.35068436019777 39.0 35.0 41.0 33.0 41.0 31 37.23932402413304 39.0 35.0 41.0 33.0 41.0 32 37.08629378003665 39.0 35.0 41.0 32.0 41.0 33 36.92085559070636 39.0 35.0 41.0 32.0 41.0 34 36.856876447809704 39.0 35.0 41.0 32.0 41.0 35 36.76746879645957 39.0 35.0 41.0 31.0 41.0 36 36.711341320056704 39.0 35.0 41.0 31.0 41.0 37 36.6766057722228 39.0 35.0 41.0 31.0 41.0 38 36.58599665491132 39.0 35.0 41.0 31.0 41.0 39 36.61204426408049 39.0 35.0 41.0 31.0 41.0 40 36.49574624866023 39.0 35.0 41.0 31.0 41.0 41 36.47267313210939 39.0 35.0 41.0 31.0 41.0 42 36.41861256612385 39.0 35.0 41.0 31.0 41.0 43 36.3666070255506 39.0 35.0 41.0 31.0 41.0 44 36.291728252601736 39.0 35.0 40.0 31.0 41.0 45 36.23617233689451 39.0 35.0 40.0 30.0 41.0 46 36.16259875358711 39.0 35.0 40.0 30.0 41.0 47 36.045016077170416 38.0 35.0 40.0 30.0 41.0 48 36.03203008851087 38.0 35.0 40.0 30.0 41.0 49 36.06885955813712 38.0 35.0 40.0 30.0 41.0 50 35.96917461881547 38.0 35.0 40.0 30.0 41.0 51 35.00688898108771 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 6.0 10 11.0 11 10.0 12 15.0 13 6.0 14 26.0 15 21.0 16 49.0 17 103.0 18 247.0 19 410.0 20 739.0 21 1183.0 22 1744.0 23 2575.0 24 4020.0 25 5911.0 26 7836.0 27 9141.0 28 10056.0 29 11249.0 30 14023.0 31 17607.0 32 23583.0 33 33898.0 34 66477.0 35 94398.0 36 68931.0 37 104968.0 38 193284.0 39 252854.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.771872731044496 22.341648515022648 24.750630985720708 13.13584776821215 2 32.205770494070464 24.397538291325244 25.95469003906925 17.44200117553504 3 30.383583134529612 24.139957819036752 28.124675863499636 17.351783182933996 4 28.345736956747224 25.074767486083736 28.29819693669398 18.281298620475052 5 24.38424869481036 28.74604553469557 27.210502886975764 19.659202883518308 6 25.67636483075753 33.04161048300661 25.497657573557376 15.78436711267849 7 78.38009542578571 5.357868305500812 10.791368461086332 5.470667807627148 8 77.68709158800954 4.235491650243751 10.97925958579677 7.098157175949936 9 72.56000847076722 6.524651661307609 13.416225841026172 7.499114026899008 10 40.393026311240185 27.091976973343012 19.545863153891364 12.969133561525428 11 29.799705251875668 22.859510597102652 28.07605538844518 19.264728762576496 12 27.913987138263664 20.796381772291948 32.264871382636656 19.024759706807732 13 22.20432268436884 27.109156207862256 32.84442744528576 17.842093662483144 14 16.705887183210592 31.6603568094596 30.472936763129688 21.16081924420012 15 15.396915949244546 25.706725616291532 41.03168326245549 17.864675172008436 16 17.567550046675656 25.397067212944712 36.4653562908412 20.570026449538428 17 18.462058742177508 24.060112194447324 29.6167842201708 27.86104484320437 18 18.924817619195796 26.30065173045673 33.71235694775784 21.062173702589636 19 21.40921584897832 26.881828475607648 29.98230214708018 21.726653528333852 20 24.00198371538222 25.993154237112332 30.460835667116136 19.544026380389308 21 21.267027970819072 26.96686028420288 31.628159250423536 20.137952494554508 22 18.568483559796704 26.833424091553436 28.884451820350588 25.713640528299276 23 18.28281125747675 27.519296926321612 30.27305258790582 23.92483922829582 24 21.236343048784704 23.727548145074852 31.976281851813436 23.059826954327008 25 17.708441378833452 26.741153234450092 30.25933080939045 25.291074577326007 26 17.675703592296788 30.807013449503856 29.578428067627836 21.93885489057152 27 21.279993430833592 28.738698440687344 29.293295992808492 20.688012135670576 28 16.2405352141894 26.944062683677352 32.61342616602704 24.201975936106212 29 20.409146699858244 26.040370120665212 29.743737682812988 23.806745496663556 30 22.51516958821699 27.508276285309268 27.812640459150156 22.163913667323584 31 21.4091078034782 29.00470646198527 26.16689140130692 23.419294333229608 32 24.552043356498288 30.98301956920098 23.65450938699305 20.81042768730768 33 23.463592988279224 28.55566936348235 24.749442485219376 23.23129516301905 34 18.633743041869792 26.912081215641532 29.460226290495456 24.99394945199322 35 19.798041351173808 29.05311084603948 26.770217473982644 24.378630328804064 36 22.25337534142378 27.517568198319676 26.8126793555302 23.416377104726344 37 21.288420979843032 26.477630259654944 30.177324274798607 22.05662448570342 38 20.859588389862736 29.045439615530892 25.003565501503992 25.091406493102376 39 21.501486706081664 26.849738962071708 28.776298274729456 22.872476057117172 40 21.48171437955952 25.661562597240952 30.862548836566056 21.994174186633476 41 17.962780486118316 27.96498461432078 27.302341562078624 26.76989333748228 42 22.173853853334716 24.823453652802268 26.92904435916053 26.073648134702488 43 23.332533796632436 24.204028800608512 26.796148394011688 25.667289008747364 44 21.209115582754208 24.710005877675208 27.45382135324828 26.627057186322308 45 21.675439961276492 24.813189330290772 26.708955675414032 26.802415033018708 46 23.078086643847456 26.56471493275248 28.08016111744978 22.27703730595028 47 18.68808992843066 25.097565086609276 31.485215053763444 24.729129931196624 48 19.48633008332469 22.80667634754348 30.066361546174324 27.640632022957508 49 20.821880510320508 20.707676416692596 32.897369740345056 25.573073332641844 50 20.026881720430108 22.106541506759324 31.01662171973862 26.84995505307195 51 18.193565674376792 23.04513276631055 27.064101234311792 31.697200325000864 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 356.0 1 560.0 2 764.0 3 3455.0 4 6146.0 5 4216.5 6 2287.0 7 2393.5 8 2500.0 9 2576.0 10 2652.0 11 2703.0 12 2754.0 13 2747.5 14 2741.0 15 2710.0 16 2679.0 17 2934.0 18 3189.0 19 2777.5 20 2366.0 21 2394.0 22 2422.0 23 2669.0 24 2916.0 25 3852.0 26 6096.0 27 7404.0 28 8478.5 29 9553.0 30 11338.5 31 13124.0 32 14584.0 33 16044.0 34 17753.0 35 19462.0 36 21133.5 37 22805.0 38 27475.0 39 32145.0 40 36359.0 41 40573.0 42 48473.0 43 56373.0 44 67513.0 45 78653.0 46 90302.5 47 101952.0 48 114740.0 49 127528.0 50 122895.5 51 118263.0 52 96401.0 53 74539.0 54 61121.0 55 47703.0 56 39777.0 57 31851.0 58 28374.5 59 24898.0 60 23184.0 61 21470.0 62 19008.0 63 16546.0 64 13615.0 65 10684.0 66 8877.0 67 7070.0 68 4906.5 69 2743.0 70 2537.0 71 2331.0 72 1884.5 73 1438.0 74 1159.0 75 603.5 76 327.0 77 379.0 78 431.0 79 247.5 80 64.0 81 81.5 82 99.0 83 55.0 84 11.0 85 8.5 86 6.0 87 4.5 88 3.0 89 2.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 925536.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.072011775005578 #Duplication Level Percentage of deduplicated Percentage of total 1 65.06071399778234 15.010815594471044 2 12.541718851820209 5.787253700560106 3 6.045135799855054 4.184203330672907 4 3.656160888231214 3.3741994825834167 5 2.3307254629977545 2.6887262663294758 6 1.6299992770934504 2.25644175086104 7 1.1734611657904617 1.8951876884240513 8 0.8871806565928403 1.637523404437375 9 0.6521620352713241 1.3542021141292433 >10 4.1914152050986715 19.884486007989185 >50 1.3225460022485314 22.306818330563072 >100 0.49885092320182306 15.413776693134619 >500 0.005201289246654079 0.8567209414188478 >1k 0.003782755815748421 1.9725418746713594 >5k 9.456889539371053E-4 1.3771028197542488 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 6867 0.7419484493309823 TruSeq Adapter, Index 23 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 5756 0.621909898696539 TruSeq Adapter, Index 23 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGCT 4097 0.44266241399578193 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3449 0.3726489299173668 No Hit TCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 2890 0.3122514953497217 TruSeq Adapter, Index 23 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 2126 0.22970473325726928 TruSeq Adapter, Index 20 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG 1753 0.1894037617121322 No Hit GCCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG 1307 0.14121546865816131 No Hit ACCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG 1286 0.1389465131556201 No Hit AGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG 1173 0.12673737164194585 No Hit GGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG 944 0.10199495211423434 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0804550012101096E-4 0.0 0.0 0.46772897002385644 0.0 2 2.160910002420219E-4 0.0 0.0 2.4893683227880925 0.0 3 2.160910002420219E-4 0.0 0.0 3.5362211734605675 0.0 4 2.160910002420219E-4 0.0 0.0 4.658273692217267 0.0 5 2.160910002420219E-4 0.0 0.0 7.455247553849877 0.0 6 2.160910002420219E-4 0.0 0.0 8.82666908688587 0.0 7 2.160910002420219E-4 0.0 0.0 10.37636569512153 0.0 8 2.160910002420219E-4 0.0 0.0 12.753582788784012 0.0 9 2.160910002420219E-4 0.0 0.0 13.556144763682882 0.0 10 2.160910002420219E-4 0.0 0.0 15.37908844172458 0.0 11 2.160910002420219E-4 0.0 0.0 18.118798188293052 0.0 12 2.160910002420219E-4 0.0 0.0 20.204724613629292 0.0 13 2.160910002420219E-4 0.0 0.0 21.027923279051276 0.0 14 2.160910002420219E-4 0.0 0.0 21.309381806866508 0.0 15 2.160910002420219E-4 0.0 0.0 21.904172285032672 0.0 16 2.160910002420219E-4 0.0 0.0 23.147992082425752 0.0 17 2.160910002420219E-4 0.0 0.0 24.733235660201224 0.0 18 2.160910002420219E-4 0.0 0.0 26.532085191715936 0.0 19 2.160910002420219E-4 0.0 0.0 27.5202693358227 0.0 20 2.160910002420219E-4 0.0 0.0 28.42644694533762 0.0 21 2.160910002420219E-4 0.0 0.0 29.547851191093592 0.0 22 2.160910002420219E-4 0.0 0.0 30.708043771393008 0.0 23 2.160910002420219E-4 0.0 0.0 31.848139888669916 0.0 24 2.160910002420219E-4 0.0 0.0 32.64335476956056 0.0 25 2.160910002420219E-4 0.0 0.0 33.35818379836117 0.0 26 2.160910002420219E-4 0.0 0.0 34.03249576461639 0.0 27 2.160910002420219E-4 0.0 0.0 34.646518341804104 0.0 28 2.160910002420219E-4 0.0 0.0 35.32007398955848 0.0 29 2.160910002420219E-4 0.0 0.0 36.022693876845416 0.0 30 3.241365003630329E-4 0.0 0.0 36.78614338070048 0.0 31 3.241365003630329E-4 0.0 0.0 37.536087197040416 0.0 32 3.241365003630329E-4 0.0 0.0 38.18371192476576 0.0 33 3.241365003630329E-4 0.0 0.0 38.809727552466896 0.0 34 3.241365003630329E-4 0.0 0.0 39.4664281022024 0.0 35 3.241365003630329E-4 0.0 0.0 40.12528956194033 0.0 36 3.241365003630329E-4 0.0 0.0 40.824343947723264 0.0 37 3.241365003630329E-4 0.0 0.0 41.461488261936864 0.0 38 0.0011885005013311206 0.0 0.0 42.06114078760848 0.0 39 0.0012965460014521316 0.0 0.0 42.661549631780936 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATAA 20 7.032573E-4 45.000004 10 AACGTAG 40 6.8121153E-9 45.000004 1 CGGAACA 20 7.032573E-4 45.000004 17 TCGCACC 20 7.032573E-4 45.000004 23 CAAACGA 20 7.032573E-4 45.000004 19 ACCGGAT 20 7.032573E-4 45.000004 24 CGAACAA 20 7.032573E-4 45.000004 12 ACGCCTA 35 1.2115925E-7 45.000004 18 CTCGTTA 20 7.032573E-4 45.000004 20 GAATGCG 35 1.2115925E-7 45.000004 1 CGCGGAG 20 7.032573E-4 45.000004 43 CGACGCC 20 7.032573E-4 45.000004 22 CTATCGA 20 7.032573E-4 45.000004 19 CGGCCGT 45 3.8380676E-10 45.000004 17 TAGCGTA 20 7.032573E-4 45.000004 15 CACATCG 20 7.032573E-4 45.000004 38 GGCCGTC 20 7.032573E-4 45.000004 19 CTCCCCG 35 1.2115925E-7 45.000004 13 CGCGCCG 20 7.032573E-4 45.000004 23 CGTCTCG 20 7.032573E-4 45.000004 37 >>END_MODULE