SRR2934757.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934757.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	874842
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	7719	0.8823307522958431	No Hit
CCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	7295	0.8338648578829091	No Hit
CTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGCT	5431	0.6207978126335956	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4394	0.5022621227604528	No Hit
TCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	3778	0.4318494082360015	No Hit
ACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	2606	0.2978823604719481	No Hit
CGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG	2283	0.2609614078885102	No Hit
ACCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG	1625	0.18574782646466448	No Hit
AGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG	1517	0.173402740151936	No Hit
GCCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG	1440	0.16460115083637958	No Hit
GGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG	1190	0.13602456214950814	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCC	1146	0.13099508254061876	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTC	1033	0.11807846445415288	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGGAT	25	3.8900384E-5	45.000004	20
AAGTATC	35	1.2114833E-7	45.000004	34
AAGTACG	25	3.8900384E-5	45.000004	1
CAACGGA	30	2.1649048E-6	45.000004	36
TTAGCCG	30	2.1649048E-6	45.000004	18
CCTACTA	30	2.1649048E-6	45.000004	8
GTTAGCG	25	3.8900384E-5	45.000004	1
TTCGTAG	50	2.1827873E-11	45.000004	1
CTAAGTA	30	2.1649048E-6	45.000004	13
TACGGTG	25	3.8900384E-5	45.000004	24
CACGAAA	25	3.8900384E-5	45.000004	12
CCGTCCA	25	3.8900384E-5	45.000004	20
ATCGTAG	50	2.1827873E-11	45.000004	1
TAACCTA	50	2.1827873E-11	45.000004	12
ACCTAAC	35	1.2114833E-7	45.000004	38
TGACCGG	35	1.2114833E-7	45.000004	2
ATATACG	25	3.8900384E-5	45.000004	1
CTAAACG	25	3.8900384E-5	45.000004	45
TACGAAC	25	3.8900384E-5	45.000004	2
CGCTACC	30	2.1649048E-6	45.000004	17