SRR2934756.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934756.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1015128
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	8035	0.7915257977319117	No Hit
CCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	6327	0.623271153982552	No Hit
CTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGCT	4495	0.44280130190478445	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4322	0.42575911609176387	No Hit
TCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	3101	0.3054787179547801	No Hit
ACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	2179	0.21465273344839272	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG	1767	0.1740667186798118	No Hit
ACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG	1469	0.1447108147937994	No Hit
GCCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG	1394	0.13732258395000432	No Hit
AGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG	1217	0.11988635915864798	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCGAA	35	1.211738E-7	45.000004	9
GCGCAAT	25	3.8904822E-5	45.000004	9
TAACCTA	25	3.8904822E-5	45.000004	14
TACGCAC	25	3.8904822E-5	45.000004	28
TGCGATC	25	3.8904822E-5	45.000004	38
CTAAACG	25	3.8904822E-5	45.000004	1
CCGAACC	25	3.8904822E-5	45.000004	18
GTGACCG	25	3.8904822E-5	45.000004	1
TGTACCG	25	3.8904822E-5	45.000004	21
CGTCACA	25	3.8904822E-5	45.000004	43
CCGTTAG	25	3.8904822E-5	45.000004	1
ATCGAGC	25	3.8904822E-5	45.000004	20
TGCGTAG	25	3.8904822E-5	45.000004	1
TGTCCGA	25	3.8904822E-5	45.000004	39
TTAGGTA	105	0.0	45.0	1
TCGTTGC	20	7.0328964E-4	45.0	44
TCCGCTT	20	7.0328964E-4	45.0	15
CGTATCT	20	7.0328964E-4	45.0	6
AGTCACG	20	7.0328964E-4	45.0	11
CTATCGA	20	7.0328964E-4	45.0	28