##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934752.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1895161 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.943789472240088 33.0 31.0 34.0 30.0 34.0 2 32.12354939765012 33.0 31.0 34.0 30.0 34.0 3 32.119495388518445 33.0 31.0 34.0 30.0 34.0 4 35.74404602036449 37.0 35.0 37.0 33.0 37.0 5 35.6274670067609 37.0 35.0 37.0 33.0 37.0 6 35.555876783027934 37.0 35.0 37.0 33.0 37.0 7 35.961920913315545 37.0 35.0 37.0 35.0 37.0 8 35.832360416872234 37.0 35.0 37.0 35.0 37.0 9 37.53256003051983 39.0 37.0 39.0 35.0 39.0 10 37.13364088855775 39.0 37.0 39.0 34.0 39.0 11 37.019371968925064 39.0 37.0 39.0 33.0 39.0 12 36.97610176655176 39.0 37.0 39.0 33.0 39.0 13 36.922364379596246 39.0 37.0 39.0 33.0 39.0 14 37.98267376755854 40.0 37.0 41.0 33.0 41.0 15 38.04104717224553 40.0 37.0 41.0 33.0 41.0 16 38.14554225208307 40.0 37.0 41.0 33.0 41.0 17 38.138462642487895 40.0 37.0 41.0 34.0 41.0 18 38.12461315951521 40.0 37.0 41.0 34.0 41.0 19 38.049437488424466 40.0 37.0 41.0 34.0 41.0 20 37.994293888487576 40.0 36.0 41.0 34.0 41.0 21 37.933210423810955 40.0 36.0 41.0 34.0 41.0 22 37.87788530895264 39.0 36.0 41.0 33.0 41.0 23 37.673187132913775 39.0 36.0 41.0 33.0 41.0 24 37.403745117169464 39.0 35.0 41.0 32.0 41.0 25 37.3425571758811 39.0 35.0 41.0 32.0 41.0 26 37.53174426869274 39.0 36.0 41.0 33.0 41.0 27 37.673053107361326 39.0 36.0 41.0 33.0 41.0 28 37.64767215028169 39.0 36.0 41.0 33.0 41.0 29 37.60574906300837 39.0 36.0 41.0 33.0 41.0 30 37.51942869233801 39.0 36.0 41.0 33.0 41.0 31 37.43406655160168 39.0 36.0 41.0 33.0 41.0 32 37.28768690364566 39.0 35.0 41.0 32.0 41.0 33 37.188605611871495 39.0 35.0 41.0 32.0 41.0 34 37.10451935218169 39.0 35.0 41.0 32.0 41.0 35 36.984881495556316 39.0 35.0 41.0 31.0 41.0 36 36.967413322667575 39.0 35.0 41.0 31.0 41.0 37 36.86923327358467 39.0 35.0 41.0 31.0 41.0 38 36.77271957369321 39.0 35.0 41.0 31.0 41.0 39 36.819302951042154 39.0 35.0 41.0 31.0 41.0 40 36.77205788848546 39.0 35.0 41.0 31.0 41.0 41 36.74882819982049 39.0 35.0 41.0 31.0 41.0 42 36.64008334911915 39.0 35.0 41.0 31.0 41.0 43 36.539430159231856 39.0 35.0 40.0 31.0 41.0 44 36.46224568783338 39.0 35.0 40.0 30.0 41.0 45 36.423361392514934 39.0 35.0 40.0 30.0 41.0 46 36.404767193921785 39.0 35.0 40.0 30.0 41.0 47 36.28776130365705 39.0 35.0 40.0 30.0 41.0 48 36.23557365310916 39.0 35.0 40.0 30.0 41.0 49 36.231481652482294 39.0 35.0 40.0 30.0 41.0 50 36.10958119125499 39.0 35.0 40.0 30.0 41.0 51 35.11881787352104 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 3.0 9 10.0 10 8.0 11 18.0 12 21.0 13 15.0 14 24.0 15 56.0 16 72.0 17 170.0 18 371.0 19 662.0 20 1245.0 21 2027.0 22 3229.0 23 5054.0 24 7383.0 25 11477.0 26 15776.0 27 18494.0 28 20546.0 29 23366.0 30 28538.0 31 36674.0 32 48303.0 33 67553.0 34 115214.0 35 152965.0 36 155598.0 37 241664.0 38 439631.0 39 498759.0 40 233.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.44825795803101 23.612083617170256 26.457277244519066 10.48238118027967 2 32.56240498828332 23.692498948638136 26.16368741230956 17.581408650768985 3 28.444549038313895 24.2205279656979 30.27969655348543 17.055226442502775 4 26.465719799003885 25.87358013382504 29.36325726415856 18.297442803012515 5 23.256915903187117 29.27144448413618 28.436159249794606 19.035480362882097 6 24.611312706413862 32.64424500082051 27.089730107362907 15.654712185402717 7 77.87802724939992 5.271742084181766 11.039378712415463 5.810851954002852 8 77.69561530656235 3.738204827980314 11.049879139555953 7.516300725901388 9 72.24789872733768 5.7183004504630475 14.019758743452403 8.014042078746872 10 37.59611980195878 23.500905727798322 22.378943002731695 16.524031467511204 11 26.899614333557942 24.206808814660075 27.874623844623226 21.018953007158757 12 24.362310115077292 21.545715641045803 33.025795697568704 21.066178546308205 13 22.27610213591352 25.094068525048797 34.773984901546626 17.855844437491065 14 18.888790978708407 28.76378312977103 31.326362245740597 21.021063645779964 15 16.419713153658186 26.48920065366478 37.60683129296139 19.484254899715644 16 18.81512969082838 25.648322226977022 33.53488173300316 22.00166634919144 17 18.778668408647075 26.29428317699657 29.6442887965719 25.28275961778445 18 20.431878874670804 25.990192917646578 32.63200329681752 20.945924910865095 19 20.244348633176813 28.91775421718788 29.516489628057986 21.321407521577324 20 20.79322020662097 28.35532179060249 29.9047416024285 20.946716400348045 21 19.89239964309101 29.423832592587118 30.668687251373367 20.015080512948504 22 18.446928783359304 27.08561436205156 27.67912594233419 26.78833091225495 23 17.253415409033853 27.927231512256746 29.259519375926374 25.559833702783035 24 20.111536697937538 24.51111013787219 31.476639715570336 23.900713448619932 25 17.68103079368982 28.18736772232016 28.444285208486246 25.68731627550377 26 16.884950671737123 29.687556888306588 30.23758931299241 23.189903126963884 27 19.78929494644518 27.748882548764986 28.685267373062235 23.776555131727594 28 17.787723575991695 27.177005014349703 29.97275693199681 25.06251447766179 29 18.273223224834194 27.874465546726633 28.824305692234063 25.028005536205107 30 20.15311627877526 27.267182049440652 28.008807694966286 24.5708939768178 31 20.240655015589702 28.825466543475724 24.91556126366045 26.01831717727412 32 19.59611874663947 30.62710767053564 26.106647403571515 23.670126179253373 33 20.593395495158457 26.762633887041787 27.068993082909575 25.574977534890174 34 19.135049739837406 26.064645695009553 28.309151570763646 26.491152994389395 35 17.406806070829866 27.570586351238763 28.18335750893987 26.8392500689915 36 22.128199134532633 25.91289077814497 27.825393198783637 24.133516888538757 37 20.821502764145105 26.722848349032084 28.713549930586375 23.742098956236436 38 19.098535691690575 28.01936088807231 29.247013842095736 23.635089578141383 39 21.777885889378265 24.13942667667813 30.495456586538026 23.58723084740558 40 19.840636230905975 23.31759676354674 32.22818536261563 24.613581642931656 41 18.568448801975133 24.769927198797358 28.94941379650594 27.712210202721565 42 22.79146732124606 23.917387493727446 28.734234189074176 24.55691099595232 43 23.161409505577627 24.10333475625554 28.652974602157812 24.082281136009026 44 20.96914193569834 25.034548515930837 27.032584566693806 26.963724981677018 45 20.37341418486345 23.53325126466828 28.106160901369332 27.98717364909894 46 21.639058634068554 23.996694739919196 28.99284018613722 25.371406439875027 47 18.598208806534114 24.13451944188383 31.68733421593205 25.579937535650004 48 19.33012551440221 21.928005061311413 31.589981009529005 27.151888414757373 49 22.4180425831895 20.34339035047682 32.01263639342515 25.225930672908532 50 19.550687250318045 20.21859884199812 31.734137627357256 28.49657628032658 51 18.743473509638495 20.04389073012794 28.319388168076486 32.893247592157074 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 371.0 1 656.5 2 942.0 3 6409.5 4 11877.0 5 8328.5 6 4780.0 7 4834.5 8 4889.0 9 4979.5 10 5070.0 11 5111.0 12 5152.0 13 5242.5 14 5333.0 15 5309.5 16 5286.0 17 5149.5 18 5013.0 19 5289.5 20 5566.0 21 6041.5 22 6517.0 23 7102.0 24 7687.0 25 8512.0 26 9954.5 27 10572.0 28 14242.0 29 17912.0 30 20142.5 31 22373.0 32 26896.5 33 31420.0 34 34490.5 35 37561.0 36 41861.5 37 46162.0 38 53074.0 39 59986.0 40 72190.0 41 84394.0 42 97508.0 43 110622.0 44 133702.5 45 156783.0 46 189873.0 47 222963.0 48 256774.0 49 290585.0 50 275444.5 51 260304.0 52 207302.5 53 154301.0 54 124358.0 55 94415.0 56 77702.5 57 60990.0 58 51736.5 59 42483.0 60 39620.0 61 36757.0 62 32940.5 63 29124.0 64 23772.5 65 18421.0 66 14869.0 67 11317.0 68 8938.5 69 6560.0 70 5268.0 71 3976.0 72 3704.0 73 3432.0 74 2693.0 75 1417.0 76 880.0 77 696.5 78 513.0 79 405.0 80 297.0 81 250.5 82 204.0 83 130.0 84 56.0 85 33.0 86 10.0 87 9.0 88 8.0 89 5.5 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1895161.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.51059853236899 #Duplication Level Percentage of deduplicated Percentage of total 1 67.57359910675223 19.941373546266128 2 13.33497700397476 7.8704630560534365 3 5.877024939000335 5.203035706186777 4 3.229536427113037 3.8122221178477673 5 2.0098896719092987 2.965652360103508 6 1.3353827168759764 2.3644765946874666 7 0.9520029480023671 1.9665923760090724 8 0.7106801853668268 1.6778078108216001 9 0.5636284292834106 1.4969711068211211 >10 3.4144711196700746 20.106340144654595 >50 0.7097404175887028 15.04322723384887 >100 0.2763489015807375 11.696367861037194 >500 0.007994254954642437 1.6329624566559466 >1k 0.0038154398647157087 1.971339986993341 >5k 7.267504504220398E-4 1.5696406592659191 >10k+ 1.8168761260550995E-4 0.6815269827473647 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 12711 0.6707081878531692 No Hit CCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 9350 0.49336177770648515 No Hit CTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGCT 7202 0.38002048374781877 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7092 0.37421622753950723 No Hit TCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 5631 0.2971251519000233 No Hit CGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 4216 0.22246131067492417 No Hit ACTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 3729 0.1967642854617629 TruSeq Adapter, Index 13 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 2767 0.14600342662180155 No Hit AGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 2419 0.12764087061732488 No Hit GCCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 2384 0.12579406182377117 No Hit GGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 2047 0.10801193144012566 No Hit CGTTCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 2018 0.10648171843975261 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCC 2002 0.10563746299127094 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5829789659031608E-4 0.0 0.0 0.3985413376488858 0.0 2 1.5829789659031608E-4 0.0 0.0 2.155542457870334 0.0 3 1.5829789659031608E-4 0.0 0.0 3.234395389098868 0.0 4 1.5829789659031608E-4 0.0 0.0 4.344274708059104 0.0 5 1.5829789659031608E-4 0.0 0.0 7.234266640142975 0.0 6 1.5829789659031608E-4 0.0 0.0 9.059705217656969 0.0 7 1.5829789659031608E-4 0.0 0.0 10.813065486256841 0.0 8 1.5829789659031608E-4 0.0 0.0 13.751127212938638 0.0 9 1.5829789659031608E-4 0.0 0.0 14.875464406454121 0.0 10 1.5829789659031608E-4 0.0 0.0 17.341481805503594 0.0 11 1.5829789659031608E-4 0.0 0.0 20.736655091572693 0.0 12 1.5829789659031608E-4 0.0 0.0 23.113709072738413 0.0 13 1.5829789659031608E-4 0.0 0.0 24.11953390767328 0.0 14 1.5829789659031608E-4 0.0 0.0 24.50477822200858 0.0 15 1.5829789659031608E-4 0.0 0.0 25.144037894405805 0.0 16 1.5829789659031608E-4 0.0 0.0 26.705699410234804 0.0 17 2.1106386212042143E-4 0.0 0.0 28.687008649924728 0.0 18 2.1106386212042143E-4 0.0 0.0 30.72182257866218 0.0 19 2.1106386212042143E-4 0.0 0.0 31.91839637898838 0.0 20 2.6382982765052677E-4 0.0 0.0 33.03956761457206 0.0 21 2.6382982765052677E-4 0.0 0.0 34.522660607726735 0.0 22 2.6382982765052677E-4 0.0 0.0 36.037413180199465 0.0 23 2.6382982765052677E-4 0.0 0.0 37.651365767868796 0.0 24 2.6382982765052677E-4 0.0 0.0 38.82577786267235 0.0 25 2.6382982765052677E-4 0.0 0.0 39.87529291706615 0.0 26 3.1659579318063215E-4 0.0 0.0 40.843179022784874 0.0 27 3.1659579318063215E-4 0.0 0.0 41.756610652076525 0.0 28 3.1659579318063215E-4 0.0 0.0 42.684763985751076 0.0 29 3.1659579318063215E-4 0.0 0.0 43.6608815820925 0.0 30 3.693617587107375E-4 0.0 0.0 44.684646845307604 0.0 31 4.2212772424084287E-4 0.0 0.0 45.68746402020725 0.0 32 4.2212772424084287E-4 0.0 0.0 46.634138207782875 0.0 33 4.2212772424084287E-4 0.0 0.0 47.51923451358486 0.0 34 4.2212772424084287E-4 0.0 0.0 48.32776740340267 0.0 35 4.2212772424084287E-4 0.0 0.0 49.20605689965127 0.0 36 4.2212772424084287E-4 0.0 0.0 50.023771067471316 0.0 37 4.2212772424084287E-4 0.0 0.0 50.860006089192424 0.0 38 4.2212772424084287E-4 0.0 0.0 51.66468706352653 0.0 39 4.2212772424084287E-4 0.0 0.0 52.41802675339984 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 20 7.034446E-4 45.000004 26 GCGCGAA 25 3.8917668E-5 45.000004 17 CCGTGAT 20 7.034446E-4 45.000004 33 CCTACGG 20 7.034446E-4 45.000004 2 CACGAAA 25 3.8917668E-5 45.000004 42 TCGGCTA 20 7.034446E-4 45.000004 39 CGTTAGA 20 7.034446E-4 45.000004 22 CCCGTAG 20 7.034446E-4 45.000004 14 AACGCGC 20 7.034446E-4 45.000004 40 GTCGTAC 20 7.034446E-4 45.000004 8 TCCGTCA 25 3.8917668E-5 45.000004 29 CGTCGTC 25 3.8917668E-5 45.000004 34 ACCGTCG 20 7.034446E-4 45.000004 19 CGCAATT 25 3.8917668E-5 45.000004 31 CGACTCG 20 7.034446E-4 45.000004 2 CGCAACT 20 7.034446E-4 45.000004 42 TGTACCG 20 7.034446E-4 45.000004 2 TATCGCA 25 3.8917668E-5 45.000004 28 ATACCGG 50 2.1827873E-11 45.000004 2 GCGTAAT 20 7.034446E-4 45.000004 9 >>END_MODULE