##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934750.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1972514 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36925669475603 33.0 31.0 34.0 31.0 34.0 2 32.53995408904576 34.0 31.0 34.0 31.0 34.0 3 32.5431657265804 34.0 31.0 34.0 31.0 34.0 4 36.06416937978641 37.0 35.0 37.0 35.0 37.0 5 35.9616322114824 37.0 35.0 37.0 35.0 37.0 6 35.89087022956491 37.0 35.0 37.0 35.0 37.0 7 36.14231533971368 37.0 35.0 37.0 35.0 37.0 8 35.93000556650041 37.0 35.0 37.0 35.0 37.0 9 37.6016073903658 39.0 38.0 39.0 35.0 39.0 10 37.461474037700114 39.0 37.0 39.0 35.0 39.0 11 37.371478225249604 39.0 37.0 39.0 35.0 39.0 12 37.24812193981893 39.0 37.0 39.0 34.0 39.0 13 37.171329582451634 39.0 37.0 39.0 34.0 39.0 14 38.39449098967105 40.0 38.0 41.0 34.0 41.0 15 38.4625320783528 40.0 38.0 41.0 34.0 41.0 16 38.563324772346355 40.0 38.0 41.0 35.0 41.0 17 38.527119706121226 40.0 38.0 41.0 34.0 41.0 18 38.51471269658923 40.0 38.0 41.0 35.0 41.0 19 38.47511094978287 40.0 37.0 41.0 34.0 41.0 20 38.42137495602059 40.0 37.0 41.0 34.0 41.0 21 38.36633402855443 40.0 37.0 41.0 34.0 41.0 22 38.3182456499675 40.0 37.0 41.0 34.0 41.0 23 38.14697538268423 40.0 37.0 41.0 34.0 41.0 24 37.92370396357136 40.0 36.0 41.0 34.0 41.0 25 37.862762444271624 40.0 36.0 41.0 33.0 41.0 26 37.982822935604005 40.0 36.0 41.0 34.0 41.0 27 38.030298897751805 40.0 37.0 41.0 34.0 41.0 28 37.98426475046565 40.0 36.0 41.0 34.0 41.0 29 37.984421910313436 40.0 36.0 41.0 34.0 41.0 30 37.879368663543076 40.0 36.0 41.0 34.0 41.0 31 37.79756645580209 40.0 36.0 41.0 33.0 41.0 32 37.70426623081002 40.0 36.0 41.0 33.0 41.0 33 37.57865850381797 40.0 36.0 41.0 33.0 41.0 34 37.53019192766185 40.0 36.0 41.0 33.0 41.0 35 37.44097684477778 40.0 36.0 41.0 33.0 41.0 36 37.36233405694459 40.0 35.0 41.0 33.0 41.0 37 37.304910383399054 40.0 35.0 41.0 33.0 41.0 38 37.20983323819248 40.0 35.0 41.0 33.0 41.0 39 37.22221591329643 40.0 35.0 41.0 33.0 41.0 40 37.10667503500609 39.0 35.0 41.0 32.0 41.0 41 37.03514550467069 39.0 35.0 41.0 32.0 41.0 42 36.95863755593116 39.0 35.0 41.0 32.0 41.0 43 36.916876635603096 39.0 35.0 41.0 32.0 41.0 44 36.8647380956485 39.0 35.0 41.0 32.0 41.0 45 36.81508572309246 39.0 35.0 41.0 32.0 41.0 46 36.751918617561145 39.0 35.0 41.0 32.0 41.0 47 36.63386318170619 39.0 35.0 41.0 31.0 41.0 48 36.56872397356876 39.0 35.0 41.0 31.0 41.0 49 36.53979236649271 39.0 35.0 41.0 31.0 41.0 50 36.42884714633204 39.0 35.0 40.0 31.0 41.0 51 35.48909716230151 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 22.0 10 29.0 11 27.0 12 28.0 13 34.0 14 38.0 15 64.0 16 118.0 17 233.0 18 384.0 19 702.0 20 1375.0 21 2084.0 22 3151.0 23 4514.0 24 6450.0 25 8776.0 26 12262.0 27 14990.0 28 17265.0 29 19643.0 30 23916.0 31 30420.0 32 40405.0 33 58691.0 34 114122.0 35 159181.0 36 143880.0 37 224652.0 38 407640.0 39 676920.0 40 492.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.52943908129423 21.55949209992933 24.52803883774716 12.383029981029285 2 31.21960097621614 24.933156367964944 26.056849279650233 17.790393376168687 3 31.654832361139135 24.345581324137626 27.162189976851874 16.837396337871365 4 28.910010271156505 25.82653405755295 26.95463758432133 18.308818086969218 5 26.657858955627184 29.063012987487035 24.782789881339244 19.496338175546533 6 26.791850400047856 34.62606602538689 23.37620924363528 15.20587433092997 7 80.28419570152607 5.8627213799243 9.00896013919293 4.8441227793567 8 80.74705680162472 5.584751236239641 8.191931717594906 5.476260244540724 9 74.7399511486357 7.34149415416063 10.421269506832399 7.497285190371272 10 41.59230302040949 26.15824272983614 17.298990019842698 14.950464229911676 11 31.28043704632768 25.490110589836117 23.67567479875935 19.553777565076853 12 29.390564528312602 21.23016617372551 28.70250857535105 20.67676072261084 13 24.61858318876317 24.22426406099019 30.673140976439207 20.48401177380744 14 20.033672764806738 28.525627701501737 28.439848842644462 23.00085069104706 15 18.73147668406916 25.60225174574173 34.73465841053599 20.93161315965311 16 21.393815202325563 25.017617111969802 31.326368279261896 22.262199406442743 17 20.8065443388488 25.30385082184461 28.424082161140557 25.465522678166035 18 21.902962412434082 25.452949890342985 29.72354061872311 22.920547078499823 19 23.952276130866498 26.199712650962176 27.36406433617201 22.483946881999316 20 26.496491279656315 25.130721505652176 28.035136886227424 20.337650328464083 21 23.946699491106273 26.456998530808907 27.780639326260804 21.815662651824017 22 22.915578799440713 25.06598178770848 26.942723853924484 25.075715558926326 23 23.019963356407104 26.225162406958834 27.209287234463233 23.545587002170834 24 23.074158155531467 23.92256784996203 28.92425605090762 24.079017943598878 25 21.71933887414741 26.14982707347071 27.81840838645505 24.31242566592683 26 21.584891159200897 27.40218827344191 28.166745584568726 22.84617498278846 27 22.95228322840801 27.461604835250853 27.21602989890059 22.370082037440543 28 20.55792759899296 27.03935181195165 29.519587693674165 22.883132895381227 29 22.65844500976926 24.94375198350937 29.48876408481765 22.909038921903722 30 23.992225150239747 25.742225403723367 27.57374599115646 22.69180345488042 31 24.03095744821076 26.532181774121753 26.342119751748278 23.09474102591921 32 25.71424081147206 27.327005030129065 25.994543004510994 20.96421115388788 33 24.72225799157826 27.06936427320668 25.46881796529708 22.73955976991798 34 23.59750044866602 25.528842887807134 28.201016570731564 22.672640092795284 35 23.887840593273353 25.43145447890357 27.063939723621733 23.61676520420134 36 23.900210594196036 27.33917224415137 26.507289682101113 22.253327479551476 37 24.872827265104327 27.020999597468006 27.568625621922077 20.537547515505594 38 22.6466326728226 28.060586642224084 25.75297310944308 23.53980757551024 39 24.614578147480827 25.510845550399136 26.860037495297878 23.014538806822156 40 24.200132419845943 25.050113712754385 29.643389096351154 21.10636477104852 41 21.288974374833334 27.00533430941428 27.251365516290377 24.454325799462005 42 22.38306039906434 25.96635562535931 27.824035722940373 23.826548252635977 43 23.945634859879323 24.433895019249547 27.8410698225716 23.77940029829953 44 22.783564527298665 24.935741900944684 28.32765699001376 23.953036581742893 45 22.80460366821224 24.632169911088084 27.299882282204337 25.26334413849534 46 23.81473591568932 25.82323877042191 27.37395019756514 22.988075116323635 47 22.100679640296597 25.329148487665993 29.425241088276177 23.144930783761232 48 22.479029299665303 23.731643983261968 28.826005797677485 24.963320919395247 49 22.229753502383254 23.551467822281616 30.215603032475308 24.003175642859823 50 21.14382965089221 24.041755850655562 29.941283052997342 24.873131445454884 51 21.069356161730664 24.27151340877682 27.223127440413602 27.43600298907891 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 404.0 1 1142.0 2 1880.0 3 6017.5 4 10155.0 5 7192.5 6 4230.0 7 4155.0 8 4080.0 9 4010.0 10 3940.0 11 3918.0 12 3896.0 13 3824.0 14 3752.0 15 3798.0 16 3844.0 17 3565.5 18 3287.0 19 3468.0 20 3649.0 21 4471.5 22 5294.0 23 5857.5 24 6421.0 25 8584.0 26 13608.5 27 16470.0 28 20051.5 29 23633.0 30 28406.5 31 33180.0 32 35990.0 33 38800.0 34 43395.5 35 47991.0 36 52614.0 37 57237.0 38 61155.0 39 65073.0 40 75181.5 41 85290.0 42 93812.0 43 102334.0 44 115620.0 45 128906.0 46 153131.0 47 177356.0 48 188494.0 49 199632.0 50 193228.0 51 186824.0 52 161356.0 53 135888.0 54 121622.0 55 107356.0 56 102522.0 57 97688.0 58 94538.0 59 91388.0 60 89995.0 61 88602.0 62 79842.0 63 71082.0 64 62281.5 65 53481.0 66 45458.0 67 37435.0 68 29641.0 69 21847.0 70 19134.5 71 16422.0 72 13170.0 73 9918.0 74 7947.0 75 4570.0 76 3164.0 77 2783.0 78 2402.0 79 1650.5 80 899.0 81 652.0 82 405.0 83 281.5 84 158.0 85 98.5 86 39.0 87 39.5 88 40.0 89 24.0 90 8.0 91 6.5 92 5.0 93 5.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1972514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.182218223255255 #Duplication Level Percentage of deduplicated Percentage of total 1 67.64710546841809 13.652686447351778 2 12.609596176691925 5.089792434902431 3 5.558099353875809 3.3652432219936683 4 2.9221314586547225 2.359003791024352 5 1.7612240590088288 1.7772704149481788 6 1.1716670732047205 1.4188104333852276 7 0.8040647483958562 1.1359467152426401 8 0.603684709341566 0.9746957233579123 9 0.4452148961220441 0.8086881770801113 >10 3.775040832476468 17.87612788220402 >50 1.9533910482847843 29.12971565548988 >100 0.738039476706474 18.945900387597685 >500 0.006137542182116882 0.8032918636453527 >1k 0.0038359638638230512 1.6925179956644856 >5k 7.671927727646102E-4 0.9703088561123511 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 6982 0.353964534598994 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 6428 0.3258785488974983 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5390 0.27325534825101366 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGC 4752 0.24091083764171004 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCG 4224 0.21414296679263112 No Hit CTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGCT 4188 0.21231788468928484 TruSeq Adapter, Index 14 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTC 3727 0.18894669442143375 No Hit TCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 2160 0.10950492620077727 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.069672509295245E-5 0.0 0.0 0.22189956573185285 0.0 2 5.069672509295245E-5 0.0 0.0 1.1441743886228437 0.0 3 5.069672509295245E-5 0.0 0.0 1.621331965197712 0.0 4 1.013934501859049E-4 0.0 0.0 2.1425449958783562 0.0 5 1.013934501859049E-4 0.0 0.0 3.6270971967752828 0.0 6 1.013934501859049E-4 0.0 0.0 4.3736571704941 0.0 7 1.013934501859049E-4 0.0 0.0 5.207719691723354 0.0 8 1.013934501859049E-4 0.0 0.0 6.518534215726732 0.0 9 1.013934501859049E-4 0.0 0.0 6.964665396544714 0.0 10 1.013934501859049E-4 0.0 0.0 8.179612413397319 0.0 11 1.013934501859049E-4 0.0 0.0 9.56479903311206 0.0 12 1.013934501859049E-4 0.0 0.0 10.864257490694616 0.0 13 1.013934501859049E-4 0.0 0.0 11.291326702877647 0.0 14 1.013934501859049E-4 0.0 0.0 11.458220321883648 0.0 15 1.013934501859049E-4 0.0 0.0 11.827698054361084 0.0 16 1.013934501859049E-4 0.0 0.0 12.549619419684728 0.0 17 1.013934501859049E-4 0.0 0.0 13.40548153270395 0.0 18 1.013934501859049E-4 0.0 0.0 14.317464920401072 0.0 19 1.013934501859049E-4 0.0 0.0 14.944431319625615 0.0 20 1.013934501859049E-4 0.0 0.0 15.480802671109052 0.0 21 1.013934501859049E-4 0.0 0.0 16.174181780205362 0.0 22 1.013934501859049E-4 0.0 0.0 16.938739091332177 0.0 23 1.013934501859049E-4 0.0 0.0 17.664817588113443 0.0 24 1.013934501859049E-4 0.0 0.0 18.24889455790935 0.0 25 1.013934501859049E-4 0.0 0.0 18.757940374567685 0.0 26 1.013934501859049E-4 0.0 0.0 19.229977581908162 0.0 27 1.013934501859049E-4 0.0 0.0 19.695880485512397 0.0 28 1.013934501859049E-4 0.0 0.0 20.157068593682986 0.0 29 1.013934501859049E-4 0.0 0.0 20.648877523809716 0.0 30 1.013934501859049E-4 0.0 0.0 21.19736539259037 0.0 31 2.027869003718098E-4 0.0 0.0 21.756398180190356 0.0 32 2.534836254647622E-4 0.0 0.0 22.279943260225277 0.0 33 2.534836254647622E-4 0.0 0.0 22.7746926004074 0.0 34 2.534836254647622E-4 0.0 0.0 23.25686915276647 0.0 35 2.534836254647622E-4 0.0 0.0 23.753899845577774 0.0 36 2.534836254647622E-4 0.0 0.0 24.272121769477934 0.0 37 2.534836254647622E-4 0.0 0.0 24.77822717608088 0.0 38 2.534836254647622E-4 0.0 0.0 25.270948647259285 0.0 39 2.534836254647622E-4 0.0 0.0 25.772491348603864 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATATCG 35 1.2125201E-7 45.000004 1 CACTACG 30 2.1662963E-6 45.000004 18 ACGTGCG 30 2.1662963E-6 45.000004 1 TCGCAAT 25 3.891826E-5 45.0 30 CGAAACG 20 7.034517E-4 45.0 33 CGACGAA 20 7.034517E-4 45.0 19 TAACGCC 20 7.034517E-4 45.0 12 TATGCGA 20 7.034517E-4 45.0 14 TTATCCG 40 6.8193913E-9 45.0 1 CGTTATG 20 7.034517E-4 45.0 8 ATCGACT 20 7.034517E-4 45.0 21 TATACGG 130 0.0 41.538464 2 TCGACAG 100 0.0 40.5 1 ACGCACT 45 1.929584E-8 40.0 12 CGTTTTT 3445 0.0 39.579098 1 AACGGGC 300 0.0 39.0 4 GAACGTA 35 6.250564E-6 38.57143 37 ATAGCGG 345 0.0 38.47826 2 AATAGCG 65 9.094947E-12 38.076927 1 TACGGGA 630 0.0 37.857143 4 >>END_MODULE