##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934748.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1780701 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31000656483037 33.0 31.0 34.0 30.0 34.0 2 32.490952720305096 34.0 31.0 34.0 31.0 34.0 3 32.493236652307154 34.0 31.0 34.0 31.0 34.0 4 36.00655865302485 37.0 35.0 37.0 35.0 37.0 5 35.90319205750993 37.0 35.0 37.0 35.0 37.0 6 35.829870371275135 37.0 35.0 37.0 35.0 37.0 7 36.0935468672169 37.0 35.0 37.0 35.0 37.0 8 35.918418083664804 37.0 35.0 37.0 35.0 37.0 9 37.56239144022494 39.0 38.0 39.0 35.0 39.0 10 37.37625856334107 39.0 37.0 39.0 34.0 39.0 11 37.27198895266527 39.0 37.0 39.0 34.0 39.0 12 37.12114049467036 39.0 37.0 39.0 34.0 39.0 13 37.034694763466746 39.0 37.0 39.0 33.0 39.0 14 38.20242533698807 40.0 37.0 41.0 33.0 41.0 15 38.27668036351976 40.0 37.0 41.0 34.0 41.0 16 38.369762806894585 40.0 37.0 41.0 34.0 41.0 17 38.34882891625264 40.0 37.0 41.0 34.0 41.0 18 38.32817693706018 40.0 37.0 41.0 34.0 41.0 19 38.3023960788476 40.0 37.0 41.0 34.0 41.0 20 38.26016945012105 40.0 37.0 41.0 34.0 41.0 21 38.17116798384456 40.0 37.0 41.0 34.0 41.0 22 38.11050648031309 40.0 36.0 41.0 34.0 41.0 23 37.96244288064083 40.0 36.0 41.0 34.0 41.0 24 37.711597848263125 40.0 36.0 41.0 33.0 41.0 25 37.63644710706626 40.0 35.0 41.0 33.0 41.0 26 37.75443322601605 40.0 36.0 41.0 33.0 41.0 27 37.7984400525411 40.0 36.0 41.0 33.0 41.0 28 37.729730033284646 40.0 36.0 41.0 33.0 41.0 29 37.70953293113218 40.0 36.0 41.0 33.0 41.0 30 37.57364543514043 40.0 35.0 41.0 33.0 41.0 31 37.48765345782363 40.0 35.0 41.0 33.0 41.0 32 37.40563968908874 40.0 35.0 41.0 33.0 41.0 33 37.284780544291266 39.0 35.0 41.0 33.0 41.0 34 37.18797316337779 39.0 35.0 41.0 32.0 41.0 35 37.0937737441603 39.0 35.0 41.0 32.0 41.0 36 37.03037230843359 39.0 35.0 41.0 32.0 41.0 37 36.95550179395642 39.0 35.0 41.0 32.0 41.0 38 36.869190279558445 39.0 35.0 41.0 31.0 41.0 39 36.89656152268124 39.0 35.0 41.0 32.0 41.0 40 36.80757016478342 39.0 35.0 41.0 31.0 41.0 41 36.72525145995875 39.0 35.0 41.0 31.0 41.0 42 36.620548312153474 39.0 35.0 41.0 31.0 41.0 43 36.54502917671187 39.0 35.0 41.0 31.0 41.0 44 36.47111446559529 39.0 35.0 41.0 31.0 41.0 45 36.398616050645224 39.0 35.0 41.0 31.0 41.0 46 36.32857228698136 38.0 35.0 40.0 31.0 41.0 47 36.204901889761395 38.0 35.0 40.0 31.0 41.0 48 36.14219512427971 38.0 35.0 40.0 31.0 41.0 49 36.108091700964955 38.0 35.0 40.0 31.0 41.0 50 36.00033076861303 38.0 35.0 40.0 31.0 41.0 51 35.027173006585606 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 25.0 10 53.0 11 26.0 12 28.0 13 32.0 14 38.0 15 68.0 16 124.0 17 215.0 18 413.0 19 711.0 20 1279.0 21 2064.0 22 3028.0 23 4397.0 24 6259.0 25 8702.0 26 11990.0 27 15045.0 28 17334.0 29 20183.0 30 24976.0 31 31768.0 32 41620.0 33 59558.0 34 116119.0 35 156019.0 36 140879.0 37 215219.0 38 367988.0 39 534150.0 40 384.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.1956869794536 22.22001335429137 25.49383641610804 12.090463250146993 2 31.80983219529837 24.899407592852477 25.177444163843337 18.113316048005814 3 31.893282476957108 23.75884553330402 27.08085186676483 17.267020122974042 4 28.888117657035068 25.904124274653633 26.303292916665967 18.904465151645336 5 26.10219233885981 29.57200563149007 24.462107900203346 19.863694129446774 6 26.88817493784751 34.31339680271982 23.568190280120017 15.23023797931264 7 80.84568942231178 6.098721795517608 8.042057594172183 5.013531187998434 8 82.04476776280801 4.641205907111862 8.176779818734307 5.137246511345812 9 75.89859274521663 7.120566563392732 10.42100835569812 6.5598323356925174 10 43.009803442576825 24.99717807762224 17.08074516721224 14.912273312588695 11 32.72430351867045 24.625526688646772 23.226414765870295 19.423755026812476 12 30.31362367966323 20.853585189203578 28.011271965366447 20.82151916576674 13 25.116007684614093 23.531407013305433 29.78518010603689 21.56740519604358 14 20.818767440463056 26.406791482680138 29.41246172153551 23.361979355321303 15 20.349963300969677 24.374558109418707 34.25353273794983 21.021945851661787 16 22.58902533328167 23.474687777453934 31.94562141538641 21.990665473877986 17 22.842689480154164 23.58200506429771 28.615135275377508 24.960170180170618 18 23.57897255069773 24.537303005951028 29.07287635599688 22.810848087354362 19 24.89457803415621 25.803995168194998 26.695554166589453 22.60587263105934 20 27.100113943890637 25.975051398297637 26.02171841314179 20.903116244669935 21 25.189574218243266 26.23590372555527 27.08180654697223 21.492715509229228 22 23.64080213354179 24.714705051549924 26.682188643685826 24.962304171222456 23 24.310089116589477 25.33957132612381 26.861668522677306 23.488671034609403 24 24.253650669034275 23.053280702375076 28.540389430903897 24.152679197686755 25 22.968089533279308 24.807421346986384 26.35507027850268 25.869418841231628 26 22.8615022960059 26.40954320798382 27.442226404095916 23.286728091914362 27 23.338842399706632 26.522139314797936 27.032724752779945 23.106293532715487 28 20.791643291041 27.212990839001044 27.796188130404826 24.199177739553132 29 23.65119130050469 25.247528922598462 27.29672190895608 23.80455786794077 30 23.537584355823917 25.80635378988387 27.250167209430444 23.40589464486177 31 23.95646433623612 26.534044738560823 24.941862783252216 24.56762814195084 32 25.294757514035204 27.740704363057024 23.8822800683551 23.082258054552675 33 23.923275159614107 27.08708536694257 25.240902318805908 23.748737154637414 34 22.03531081298882 25.82595281296523 26.866329608395795 25.272406765650157 35 22.32525280774257 27.55847275876186 25.77962274407663 24.336651689418943 36 22.715436224273475 28.09500303532148 25.28346982452416 23.90609091588088 37 22.956521055471974 28.172163659143223 25.043788934807136 23.827526350577667 38 21.030987234802474 28.941972852264364 25.09101752624388 24.936022386689288 39 23.139370394018986 25.349735862449673 26.399715617613513 25.111178125917828 40 23.35866605342503 24.475080319492154 28.06681189037351 24.099441736709306 41 20.656191016908508 26.741154185907686 26.08203173918586 26.520623057997945 42 22.28757101837984 25.654110375632968 25.819887785765268 26.238430820221925 43 22.686908133369947 25.350241281383006 26.485075259687058 25.477775325559993 44 21.91468416090068 25.645630569084872 26.033567679245422 26.40611759076903 45 22.200414331210013 24.49080446408465 26.521353107568313 26.787428097137028 46 22.898173247501965 25.754071009113826 26.39730083826538 24.95045490511883 47 20.942482763810432 25.830389268046684 27.839204897397146 25.38792307074573 48 21.2079400191273 24.35580145122623 28.20220800684674 26.23405052279973 49 21.940067422885708 23.67634993185268 29.004139381063975 25.379443264197636 50 20.54230328393144 24.16986344141998 28.397187399793676 26.8906458748549 51 19.748065509032678 24.067375713272472 27.062712942824202 29.121845834870648 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 397.0 1 950.0 2 1503.0 3 5500.0 4 9497.0 5 6488.0 6 3479.0 7 3462.5 8 3446.0 9 3322.5 10 3199.0 11 3148.5 12 3098.0 13 3120.0 14 3142.0 15 3195.5 16 3249.0 17 3335.0 18 3421.0 19 3504.0 20 3587.0 21 3983.0 22 4379.0 23 4576.0 24 4773.0 25 6356.0 26 9940.0 27 11941.0 28 15915.0 29 19889.0 30 22015.5 31 24142.0 32 27997.0 33 31852.0 34 35485.5 35 39119.0 36 42938.5 37 46758.0 38 50417.5 39 54077.0 40 62447.0 41 70817.0 42 81768.0 43 92719.0 44 101359.5 45 110000.0 46 125519.0 47 141038.0 48 154384.5 49 167731.0 50 166824.5 51 165918.0 52 145936.5 53 125955.0 54 112123.5 55 98292.0 56 95583.5 57 92875.0 58 93430.5 59 93986.0 60 94138.5 61 94291.0 62 86438.5 63 78586.0 64 66919.0 65 55252.0 66 46529.5 67 37807.0 68 32204.0 69 26601.0 70 22203.0 71 17805.0 72 14990.0 73 12175.0 74 9258.0 75 5357.5 76 4374.0 77 3453.5 78 2533.0 79 2165.0 80 1797.0 81 1130.0 82 463.0 83 355.0 84 247.0 85 165.0 86 83.0 87 90.0 88 97.0 89 56.5 90 16.0 91 11.0 92 6.0 93 5.0 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1780701.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.491933481416506 #Duplication Level Percentage of deduplicated Percentage of total 1 69.24906207120752 14.882962356848747 2 12.0123654764643 5.163379195492697 3 5.042672968128951 3.2513037599869365 4 2.7010948281397185 2.322070014935079 5 1.6226580357168778 1.7437029283356553 6 1.0993077807704004 1.4175749819952626 7 0.7281430561961512 1.09544414901061 8 0.5639143357058449 0.9695687513765757 9 0.4195188081522057 0.8114643287109304 >10 4.039199221015913 21.254327177939885 >50 2.0064962555665073 31.206921077342347 >100 0.5091857231347178 13.93695882054008 >500 0.004254293200678907 0.6476312723571379 >1k 0.0021271466003394534 1.2966911851280172 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 4938 0.2773065214204967 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4876 0.27382474654644434 No Hit GCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 4611 0.25894296684283324 No Hit CTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGCT 2626 0.14747001321389724 TruSeq Adapter, Index 13 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.684729777767295E-4 0.0 0.0 0.15673602699161734 0.0 2 1.684729777767295E-4 0.0 0.0 0.896893976024049 0.0 3 1.684729777767295E-4 0.0 0.0 1.306676415636314 0.0 4 1.684729777767295E-4 0.0 0.0 1.7494234012335592 0.0 5 1.684729777767295E-4 0.0 0.0 2.9429982911224286 0.0 6 1.684729777767295E-4 0.0 0.0 3.6849532852511455 0.0 7 1.684729777767295E-4 0.0 0.0 4.493679736238706 0.0 8 1.684729777767295E-4 0.0 0.0 5.837869468259972 0.0 9 1.684729777767295E-4 0.0 0.0 6.342052933086464 0.0 10 1.684729777767295E-4 0.0 0.0 7.368165683065265 0.0 11 1.684729777767295E-4 0.0 0.0 8.803499296063741 0.0 12 1.684729777767295E-4 0.0 0.0 9.89200320547919 0.0 13 1.684729777767295E-4 0.0 0.0 10.329190582809803 0.0 14 1.684729777767295E-4 0.0 0.0 10.507322677979065 0.0 15 1.684729777767295E-4 0.0 0.0 10.854377012199128 0.0 16 1.684729777767295E-4 0.0 0.0 11.580944807690903 0.0 17 1.684729777767295E-4 0.0 0.0 12.419547133404205 0.0 18 1.684729777767295E-4 0.0 0.0 13.350360335620636 0.0 19 1.684729777767295E-4 0.0 0.0 13.889754652802464 0.0 20 1.684729777767295E-4 0.0 0.0 14.41174009561403 0.0 21 1.684729777767295E-4 0.0 0.0 15.067605398098838 0.0 22 1.684729777767295E-4 0.0 0.0 15.791084522331374 0.0 23 1.684729777767295E-4 0.0 0.0 16.47738727613451 0.0 24 1.684729777767295E-4 0.0 0.0 17.05289096821982 0.0 25 1.684729777767295E-4 0.0 0.0 17.54427048673528 0.0 26 1.684729777767295E-4 0.0 0.0 17.992240134643605 0.0 27 1.684729777767295E-4 0.0 0.0 18.425777264122388 0.0 28 1.684729777767295E-4 0.0 0.0 18.894581403615767 0.0 29 1.684729777767295E-4 0.0 0.0 19.349963862546268 0.0 30 1.684729777767295E-4 0.0 0.0 19.875599553209664 0.0 31 1.684729777767295E-4 0.0 0.0 20.385904202895375 0.0 32 1.684729777767295E-4 0.0 0.0 20.864929036373876 0.0 33 1.684729777767295E-4 0.0 0.0 21.33412627948207 0.0 34 2.2463063703563932E-4 0.0 0.0 21.797876229642146 0.0 35 2.2463063703563932E-4 0.0 0.0 22.26600647722442 0.0 36 2.2463063703563932E-4 0.0 0.0 22.756206684895442 0.0 37 2.2463063703563932E-4 0.0 0.0 23.253763545929385 0.0 38 2.2463063703563932E-4 0.0 0.0 23.75468986651886 0.0 39 2.2463063703563932E-4 0.0 0.0 24.256683182634255 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACAT 30 2.1661763E-6 45.000004 35 CGACCGT 20 7.034333E-4 45.0 26 CCGTCTA 25 3.8916725E-5 45.0 13 TACGCAC 20 7.034333E-4 45.0 30 CGTAGAT 20 7.034333E-4 45.0 34 CAATCGA 25 3.8916725E-5 45.0 45 GCGTCTA 20 7.034333E-4 45.0 33 AACACGT 140 0.0 41.785713 41 CGCAATA 55 6.184564E-11 40.909092 22 TATAGCG 85 0.0 39.705883 1 CGTTTTT 3185 0.0 39.41915 1 TAAGACG 70 0.0 38.571426 1 ACGACTA 35 6.250224E-6 38.571426 27 AAATGCG 135 0.0 38.333336 1 ATATGCG 60 1.5643309E-10 37.500004 1 CCGTAGT 30 1.1401738E-4 37.500004 32 GACGAAC 30 1.1401738E-4 37.500004 40 GTGCGAT 30 1.1401738E-4 37.500004 38 TCGAATA 30 1.1401738E-4 37.500004 20 TAGCGCG 140 0.0 36.964283 1 >>END_MODULE