##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934745.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2251139 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22184280935118 33.0 31.0 34.0 30.0 34.0 2 32.40037065680973 34.0 31.0 34.0 30.0 34.0 3 32.40655730276984 34.0 31.0 34.0 30.0 34.0 4 35.94661591309999 37.0 35.0 37.0 35.0 37.0 5 35.843391278814856 37.0 35.0 37.0 35.0 37.0 6 35.77394199114315 37.0 35.0 37.0 35.0 37.0 7 36.09103702614543 37.0 35.0 37.0 35.0 37.0 8 35.93191224531226 37.0 35.0 37.0 35.0 37.0 9 37.64499882059704 39.0 38.0 39.0 35.0 39.0 10 37.35454141214736 39.0 37.0 39.0 34.0 39.0 11 37.23834378952166 39.0 37.0 39.0 34.0 39.0 12 37.14898946710976 39.0 37.0 39.0 34.0 39.0 13 37.093119527492526 39.0 37.0 39.0 33.0 39.0 14 38.24229734370024 40.0 37.0 41.0 33.0 41.0 15 38.3183983752225 40.0 38.0 41.0 34.0 41.0 16 38.389597443782904 40.0 38.0 41.0 34.0 41.0 17 38.38979512149183 40.0 38.0 41.0 34.0 41.0 18 38.37029876875662 40.0 37.0 41.0 34.0 41.0 19 38.35336822826134 40.0 37.0 41.0 34.0 41.0 20 38.323842286060525 40.0 37.0 41.0 34.0 41.0 21 38.23543281867535 40.0 37.0 41.0 34.0 41.0 22 38.17087838645237 40.0 37.0 41.0 34.0 41.0 23 37.96722325898134 40.0 36.0 41.0 34.0 41.0 24 37.71784194578833 40.0 36.0 41.0 33.0 41.0 25 37.631096524914724 39.0 36.0 41.0 33.0 41.0 26 37.773697670379306 40.0 36.0 41.0 33.0 41.0 27 37.86047640772071 40.0 36.0 41.0 34.0 41.0 28 37.78701137513055 40.0 36.0 41.0 33.0 41.0 29 37.81913999979566 40.0 36.0 41.0 33.0 41.0 30 37.73086202140339 40.0 36.0 41.0 33.0 41.0 31 37.62727445972905 40.0 36.0 41.0 33.0 41.0 32 37.569245168779005 40.0 36.0 41.0 33.0 41.0 33 37.4568691671194 40.0 36.0 41.0 33.0 41.0 34 37.39913661484253 40.0 36.0 41.0 33.0 41.0 35 37.375449938897596 40.0 36.0 41.0 33.0 41.0 36 37.342520830566215 40.0 36.0 41.0 33.0 41.0 37 37.28683701894907 40.0 35.0 41.0 33.0 41.0 38 37.207243088942974 39.0 35.0 41.0 32.0 41.0 39 37.20545110719507 39.0 35.0 41.0 32.0 41.0 40 37.13352351853884 39.0 35.0 41.0 32.0 41.0 41 37.06139958483239 39.0 35.0 41.0 32.0 41.0 42 36.98200199987651 39.0 35.0 41.0 32.0 41.0 43 36.923062503026244 39.0 35.0 41.0 32.0 41.0 44 36.846905055618514 39.0 35.0 41.0 31.0 41.0 45 36.7991270196998 39.0 35.0 41.0 31.0 41.0 46 36.741459767699816 39.0 35.0 41.0 31.0 41.0 47 36.64324326485392 39.0 35.0 41.0 31.0 41.0 48 36.618989764736874 39.0 35.0 41.0 31.0 41.0 49 36.618435822932305 39.0 35.0 41.0 31.0 41.0 50 36.512635603576676 39.0 35.0 40.0 31.0 41.0 51 35.54814118541769 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 34.0 10 30.0 11 32.0 12 25.0 13 29.0 14 32.0 15 63.0 16 112.0 17 207.0 18 410.0 19 720.0 20 1296.0 21 2082.0 22 3385.0 23 4847.0 24 7037.0 25 10437.0 26 14394.0 27 17830.0 28 20784.0 29 24778.0 30 30646.0 31 39081.0 32 51242.0 33 71667.0 34 131894.0 35 179385.0 36 165049.0 37 259779.0 38 487381.0 39 725910.0 40 532.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.89495984032972 21.558908623590103 26.218194434017622 12.327937102062556 2 31.270969940105875 23.90727538370576 26.46877869380789 18.352975982380475 3 30.50984412779486 23.842819124007892 28.623021501559876 17.02431524663737 4 27.85292245392221 25.728397935445123 27.3402042255054 19.078475385127263 5 24.77905629105977 29.51239350391069 26.04312750123382 19.665422703795723 6 26.29819837868741 33.266670783101354 25.315096046934464 15.12003479127677 7 80.59675568678789 5.36128599788818 8.974567985362077 5.067390329961855 8 81.57363894455207 4.034668672169954 8.522574572249871 5.869117811028106 9 75.99033200526489 5.761083611451802 11.283132671949621 6.965451711333685 10 40.293824592795026 27.129599727071497 17.749814649384156 14.826761030749323 11 28.201368285121443 25.706808864312684 25.91856833363022 20.17325451693565 12 25.447873276594645 22.695399973080292 31.190655041736647 20.666071708588408 13 22.390620925673627 25.021378066836387 32.570756403758274 20.01724460373171 14 19.303472597649456 28.170228493220545 30.805383408132503 21.720915500997496 15 18.684230516196468 25.706675598441496 35.213018831800255 20.396075053561773 16 20.903684756916387 26.04126177903719 31.35075177499035 21.704301689056074 17 20.79374041318639 25.1414061948196 28.963027160917203 25.101826231076803 18 21.273764081205115 25.05589392747405 31.798791633923983 21.871550357396856 19 21.899980409916935 26.79510239038993 28.606363267661393 22.69855393203174 20 23.963069361776416 26.485925569234066 28.65340612019071 20.897598948798805 21 22.723296962115622 27.415943662297177 29.444472331561933 20.416287044025268 22 21.942625488697054 25.00445330119553 27.94318787067347 25.109733339433948 23 20.96605318463231 25.689661988886513 29.25772242407066 24.086562402410514 24 21.81322432777363 23.905320817595005 30.575855155989924 23.705599698641443 25 20.644127261799472 26.039795854454123 28.055886375741345 25.26019050800506 26 19.73814144750724 26.8551608763386 28.628529824235642 24.778167851918518 27 20.498378820676997 26.20682241300959 29.80442344964038 23.490375316673028 28 17.765406756313137 25.869793024775454 30.826928057307878 25.537872161603524 29 19.105350669150152 23.17564575088433 31.05170316004476 26.667300419920757 30 20.660652229826766 24.055067234853112 31.363234344924944 23.921046190395174 31 20.56558924171275 25.25072863115072 27.477023853258288 26.706658273878247 32 20.627957669428675 25.11955059194479 29.238398872748416 25.01409286587812 33 20.897998746412373 23.870494003257907 30.268321947245376 24.96318530308435 34 19.083450644318276 22.591363749639626 30.24322354150499 28.08196206453711 35 18.34475792032389 22.73902233491579 31.777646782362172 27.138572962398143 36 19.724637172560204 23.64340895875377 30.644575923565803 25.987377945120226 37 19.024547129253236 23.750332609403507 31.895986875977005 25.329133385366255 38 18.947874831363144 24.892554391354775 30.61348055362197 25.546090223660112 39 20.533027947185847 22.75403695640296 31.076446190128642 25.63648890628255 40 20.94113246672018 22.032579951748872 31.611952882518583 25.414334699012365 41 18.614976685135836 23.47229558014854 29.154263686071808 28.758464048643823 42 20.020576250511407 22.174641370435143 29.86159450837998 27.94318787067347 43 20.904662039971768 21.965147420927806 30.106581601580356 27.023608937520073 44 19.671686199741554 23.24032412036751 29.621982471984182 27.46600720790675 45 20.500288964830695 22.307196490310016 29.522699397949214 27.669815146910075 46 21.410716974829185 22.840304397018578 30.472440839948135 25.276537788204106 47 18.22126487968979 22.63911735348195 32.166116796874825 26.973500969953434 48 18.39770889314254 21.111757203797723 32.68287742338434 27.8076564796754 49 20.11017533790672 19.87069656738211 33.70746986303378 26.311658231677388 50 19.306848666386216 20.098403519285128 32.82214025877567 27.77260755555299 51 18.39770889314254 20.295459320814928 30.46426719984861 30.842564586193923 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 386.0 1 1006.0 2 1626.0 3 6193.0 4 10760.0 5 7360.5 6 3961.0 7 3979.0 8 3997.0 9 4090.0 10 4183.0 11 4199.5 12 4216.0 13 4244.0 14 4272.0 15 4210.0 16 4148.0 17 4314.0 18 4480.0 19 4444.5 20 4409.0 21 4948.5 22 5488.0 23 6449.5 24 7411.0 25 9272.0 26 13654.5 27 16176.0 28 19790.5 29 23405.0 30 26887.5 31 30370.0 32 34625.0 33 38880.0 34 48286.5 35 57693.0 36 61965.0 37 66237.0 38 71155.5 39 76074.0 40 87141.5 41 98209.0 42 111726.0 43 125243.0 44 141703.5 45 158164.0 46 188058.0 47 217952.0 48 244682.0 49 271412.0 50 264297.5 51 257183.0 52 220349.5 53 183516.0 54 156482.0 55 129448.0 56 116666.0 57 103884.0 58 93890.0 59 83896.0 60 78212.0 61 72528.0 62 65052.5 63 57577.0 64 49541.0 65 41505.0 66 33583.0 67 25661.0 68 21808.0 69 17955.0 70 15449.0 71 12943.0 72 10113.5 73 7284.0 74 5423.5 75 2674.0 76 1785.0 77 1454.0 78 1123.0 79 788.5 80 454.0 81 442.0 82 430.0 83 250.5 84 71.0 85 49.0 86 27.0 87 19.5 88 12.0 89 7.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2251139.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.49564394240463 #Duplication Level Percentage of deduplicated Percentage of total 1 65.49833712162972 13.424305964645065 2 12.882544882798 5.280721059797492 3 6.0209598436996785 3.702103474439545 4 3.3534106890732502 2.7492124590359643 5 2.1846809922025954 2.2388221871961833 6 1.4540738723156503 1.7881308211761062 7 1.0129350772826418 1.4532529676530004 8 0.7306308082738083 1.1979799119785024 9 0.550532584657829 1.0155167850454736 >10 3.8442206221509485 16.709466398561585 >50 1.6013773253789085 24.278699941965947 >100 0.8545835183708097 22.586047934856037 >500 0.007292789650677039 0.9933894703136412 >1k 0.0035358980124494737 1.2253856798224172 >5k 6.629808773342763E-4 0.8770290130258543 >10k+ 2.209936257780921E-4 0.4799359304871121 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 10596 0.4706950570355718 RNA PCR Primer, Index 35 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 7697 0.3419158035110227 RNA PCR Primer, Index 10 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5865 0.26053477817229415 No Hit CTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGCT 5801 0.25769177292028617 TruSeq Adapter, Index 10 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 4089 0.18164138242907257 RNA PCR Primer, Index 35 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 2767 0.12291555519228267 TruSeq Adapter, Index 10 (95% over 24bp) CGCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTG 2312 0.1027035647287884 TruSeq Adapter, Index 10 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.221097853131237E-4 0.0 0.0 0.2739057872481442 0.0 2 2.221097853131237E-4 0.0 0.0 1.4583728503659703 0.0 3 2.221097853131237E-4 0.0 0.0 2.1205265423414548 0.0 4 2.221097853131237E-4 0.0 0.0 2.8723237436693156 0.0 5 2.221097853131237E-4 0.0 0.0 4.8096985570415685 0.0 6 2.221097853131237E-4 0.0 0.0 5.815056289282892 0.0 7 2.221097853131237E-4 0.0 0.0 6.9228066325535655 0.0 8 2.221097853131237E-4 0.0 0.0 8.680361363736314 0.0 9 2.221097853131237E-4 0.0 0.0 9.270862438969784 0.0 10 2.221097853131237E-4 0.0 0.0 10.672375184295595 0.0 11 2.6653174237574847E-4 0.0 0.0 12.608905980483657 0.0 12 2.6653174237574847E-4 0.0 0.0 14.190816293440786 0.0 13 2.6653174237574847E-4 0.0 0.0 14.777452658409809 0.0 14 2.6653174237574847E-4 0.0 0.0 14.998762848495806 0.0 15 2.6653174237574847E-4 0.0 0.0 15.421571035817868 0.0 16 2.6653174237574847E-4 0.0 0.0 16.352211036279858 0.0 17 2.6653174237574847E-4 0.0 0.0 17.520153131370385 0.0 18 2.6653174237574847E-4 0.0 0.0 18.80323693916724 0.0 19 2.6653174237574847E-4 0.0 0.0 19.563296624508748 0.0 20 2.6653174237574847E-4 0.0 0.0 20.2672069561231 0.0 21 2.6653174237574847E-4 0.0 0.0 21.155290721719094 0.0 22 2.6653174237574847E-4 0.0 0.0 22.06136537992545 0.0 23 2.6653174237574847E-4 0.0 0.0 22.980899891121783 0.0 24 2.6653174237574847E-4 0.0 0.0 23.740026715364976 0.0 25 2.6653174237574847E-4 0.0 0.0 24.384722578214852 0.0 26 2.6653174237574847E-4 0.0 0.0 24.974957121705945 0.0 27 2.6653174237574847E-4 0.0 0.0 25.526189186896055 0.0 28 2.6653174237574847E-4 0.0 0.0 26.087904833952944 0.0 29 2.6653174237574847E-4 0.0 0.0 26.68609090775825 0.0 30 2.6653174237574847E-4 0.0 0.0 27.36881196585373 0.0 31 3.5537565650099794E-4 0.0 0.0 27.996094421535055 0.0 32 3.5537565650099794E-4 0.0 0.0 28.581531393663386 0.0 33 3.5537565650099794E-4 0.0 0.0 29.16790122689003 0.0 34 3.5537565650099794E-4 0.0 0.0 29.73992276798545 0.0 35 3.5537565650099794E-4 0.0 0.0 30.354500543946862 0.0 36 3.5537565650099794E-4 0.0 0.0 30.92918740246604 0.0 37 3.5537565650099794E-4 0.0 0.0 31.504673856212342 0.0 38 3.5537565650099794E-4 0.0 0.0 32.07522947272469 0.0 39 3.997976135636227E-4 0.0 0.0 32.63943274937709 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCGT 30 2.1664328E-6 45.000004 36 ACGACCG 30 2.1664328E-6 45.000004 1 ACGCGAA 25 3.8920025E-5 45.0 13 GGTCGAT 25 3.8920025E-5 45.0 42 GGCCGTA 20 7.034729E-4 45.0 10 CTGCGTA 25 3.8920025E-5 45.0 1 CCCGTTG 25 3.8920025E-5 45.0 19 TCGGTCG 20 7.034729E-4 45.0 14 TACGTAG 85 0.0 45.0 1 TATCCGT 35 1.2126293E-7 45.0 18 CGTAAGG 300 0.0 43.5 2 GATTACG 100 0.0 40.5 1 ATCGGGT 95 0.0 40.26316 4 TTAAGCG 90 0.0 40.0 1 CGTTTTT 3965 0.0 39.779324 1 ACGCATG 115 0.0 39.130432 1 TCGGTAC 70 0.0 38.571426 36 TACGGGA 740 0.0 38.006756 4 CATATCG 60 1.5643309E-10 37.500004 2 GTATACG 60 1.5643309E-10 37.500004 1 >>END_MODULE