##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934744.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 842160 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.154664196827206 33.0 31.0 34.0 30.0 34.0 2 32.351730075045126 34.0 31.0 34.0 30.0 34.0 3 32.323385104968175 34.0 31.0 34.0 30.0 34.0 4 35.90653438776479 37.0 35.0 37.0 35.0 37.0 5 35.800843070200436 37.0 35.0 37.0 35.0 37.0 6 35.731229220100694 37.0 35.0 37.0 33.0 37.0 7 36.051084117032396 37.0 35.0 37.0 35.0 37.0 8 35.89912486938349 37.0 35.0 37.0 35.0 37.0 9 37.605975111617745 39.0 38.0 39.0 35.0 39.0 10 37.3655504892182 39.0 37.0 39.0 34.0 39.0 11 37.182198157119785 39.0 37.0 39.0 34.0 39.0 12 36.96605158164719 39.0 35.0 39.0 33.0 39.0 13 36.806526075805074 39.0 35.0 39.0 33.0 39.0 14 37.90189631423957 40.0 36.0 41.0 33.0 41.0 15 38.02564120832146 40.0 36.0 41.0 33.0 41.0 16 38.1322670276432 40.0 36.0 41.0 34.0 41.0 17 38.09977795193313 40.0 36.0 41.0 34.0 41.0 18 38.01770328678636 39.0 36.0 41.0 34.0 41.0 19 37.93377624204427 39.0 36.0 41.0 34.0 41.0 20 37.77261090529116 39.0 35.0 41.0 34.0 41.0 21 37.68309228650138 39.0 35.0 41.0 34.0 41.0 22 37.63399472784269 39.0 35.0 41.0 33.0 41.0 23 37.46418257813242 39.0 35.0 41.0 33.0 41.0 24 37.17704236724613 39.0 35.0 41.0 33.0 41.0 25 37.09873420727653 39.0 35.0 41.0 33.0 41.0 26 37.28156644818087 39.0 35.0 41.0 33.0 41.0 27 37.343130759000665 39.0 35.0 41.0 33.0 41.0 28 37.29121425857319 39.0 35.0 41.0 33.0 41.0 29 37.31577847439917 39.0 35.0 41.0 33.0 41.0 30 37.14818205566638 39.0 35.0 41.0 33.0 41.0 31 36.96272917260378 39.0 35.0 41.0 32.0 41.0 32 36.76553861499003 39.0 35.0 41.0 32.0 41.0 33 36.501059181153224 39.0 35.0 41.0 31.0 41.0 34 36.28358031727938 39.0 35.0 41.0 30.0 41.0 35 36.16360786548874 39.0 35.0 41.0 30.0 41.0 36 36.063889284696494 39.0 35.0 41.0 30.0 41.0 37 35.93631851429657 39.0 35.0 41.0 30.0 41.0 38 35.83492091764035 39.0 35.0 41.0 29.0 41.0 39 35.8696245369051 39.0 35.0 41.0 29.0 41.0 40 35.759310582312146 39.0 35.0 41.0 29.0 41.0 41 35.70595730027548 38.0 35.0 41.0 29.0 41.0 42 35.56415764225326 38.0 35.0 40.0 28.0 41.0 43 35.454880307779995 38.0 35.0 40.0 27.0 41.0 44 35.37137954782939 38.0 35.0 40.0 27.0 41.0 45 35.34816068205566 38.0 35.0 40.0 27.0 41.0 46 35.30392324498908 38.0 35.0 40.0 27.0 41.0 47 35.187827728697634 38.0 35.0 40.0 26.0 41.0 48 35.16116889902156 38.0 35.0 40.0 26.0 41.0 49 35.154569203001806 38.0 35.0 40.0 26.0 41.0 50 35.02844827586207 38.0 34.0 40.0 26.0 41.0 51 34.17759214401064 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 17.0 10 15.0 11 16.0 12 11.0 13 11.0 14 16.0 15 24.0 16 65.0 17 112.0 18 235.0 19 438.0 20 750.0 21 1218.0 22 1870.0 23 2965.0 24 4778.0 25 7674.0 26 11321.0 27 14026.0 28 14075.0 29 13703.0 30 14827.0 31 17396.0 32 21746.0 33 29865.0 34 59491.0 35 83355.0 36 62418.0 37 91644.0 38 164062.0 39 223877.0 40 132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.123824451410655 21.207015294005892 24.953809252398592 16.715351002184857 2 34.36829106108103 23.515958962667426 24.700056996295242 17.4156929799563 3 29.31580697254678 23.600147240429372 30.68823026503277 16.395815521991068 4 27.4508406953548 24.26059181153225 30.5601073430227 17.728460150090246 5 24.500094993825403 28.045145815521995 29.356654317469367 18.098104873183242 6 25.18713783604066 31.199178303410278 28.668899021563597 14.944784838985466 7 75.49610525315855 5.809466134701244 13.545525790823595 5.148902821316614 8 76.27422342547735 4.025244609100408 13.60632183908046 6.094210126341788 9 71.22482663626865 6.133988790728603 16.14847534910231 6.492709223900446 10 42.30918115322504 22.850289731167475 21.02961432506887 13.810914790538614 11 29.95642158259713 22.24850384724993 28.894271872328297 18.90080269782464 12 26.410658307210035 20.39481808682436 34.04115607485513 19.153367531110476 13 21.801201671891327 25.217773344732592 34.774152180108295 18.20687280326779 14 17.431960672556286 28.609171653842502 33.83870048446851 20.120167189132708 15 17.424836135651184 23.162106963047403 40.593236439631426 18.81982046166999 16 18.923363731357462 23.667949083309587 36.59102783319084 20.81765935214211 17 18.660824546404484 22.989693169943955 32.64961527500713 25.69986700864444 18 19.7642965707229 22.45642158259713 35.76256293340933 22.016718913270637 19 21.394628099173556 24.811437256578323 31.92730597511162 21.866628669136507 20 23.75700579462335 24.694594851334664 31.382753870998386 20.1656454830436 21 20.52970931889427 26.00800322979006 33.249501282416645 20.212786168899022 22 20.466538425002376 22.53799753016054 31.561342262752923 25.434121782084162 23 18.957561508501946 24.82164909280897 32.673007504512206 23.54778189417688 24 20.936045407048542 22.24862258953168 34.33041227320224 22.484919730217538 25 18.123634463759856 25.095468794528358 32.68191317564359 24.098983566068206 26 17.887456065355753 25.451220670656404 32.67514486558374 23.986178398404103 27 18.905196162249453 25.695829771064883 31.623563218390803 23.77541084829486 28 15.839982901111426 25.82419017763845 33.81887052341598 24.516956397834143 29 17.37460815047022 22.462239954402964 33.25496342737722 26.908188467749593 30 19.146599221050632 23.45480668756531 32.682150660207085 24.716443431176973 31 21.12662676926 25.80519141255818 29.45236059656122 23.615821221620596 32 21.450911940723852 24.061461005034673 29.570746651467655 24.91688040277382 33 21.62902536335138 23.598128621639596 30.080032297900637 24.69281371710839 34 18.531395459295148 23.569392989455686 32.86845730027548 25.030754250973686 35 17.116699914505556 22.83022228555144 32.317018143820654 27.736059656122354 36 21.47323548969317 24.366628669136507 30.99126056806308 23.168875273107247 37 20.244727842690224 25.545264557803744 32.10933789303695 22.100669706469077 38 19.350479718818278 26.51823881447706 29.75135366201197 24.379927804692695 39 21.901895126816758 23.568086824356417 31.429300845445045 23.10071720338178 40 21.012277951933125 21.87410943288686 33.41027833190843 23.703334283271587 41 18.58934169278997 22.974256673316233 30.64085209461385 27.795549539279946 42 21.867341122827018 21.9718343307685 29.48964567303125 26.67117887337323 43 22.33031727937684 22.20112567683101 29.262610430322027 26.205946613470125 44 19.358910420822646 23.977747696399735 29.50603210791299 27.157309774864636 45 20.029923055001426 22.876294290871094 29.479315094518853 27.614467559608624 46 21.183741806782557 23.178612140210888 31.14883157594756 24.48881447705899 47 17.963094898831574 23.107366771159874 33.983091099078564 24.946447230929987 48 20.2076802507837 20.53255913365631 33.10475444096134 26.15500617459865 49 21.298684335518193 19.50567588106773 34.431343212691175 24.7642965707229 50 19.14434311769735 21.558254963427377 33.440320129191605 25.857081789683672 51 18.318846774959628 21.149781514201578 30.82656502327349 29.70480668756531 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 230.0 1 473.0 2 716.0 3 8838.0 4 16960.0 5 11102.0 6 5244.0 7 5214.5 8 5185.0 9 5175.5 10 5166.0 11 5140.0 12 5114.0 13 4889.5 14 4665.0 15 4386.5 16 4108.0 17 3855.5 18 3603.0 19 3349.0 20 3095.0 21 3029.0 22 2963.0 23 3227.0 24 3491.0 25 3894.0 26 4735.5 27 5174.0 28 6238.5 29 7303.0 30 8798.0 31 10293.0 32 11424.5 33 12556.0 34 14888.5 35 17221.0 36 18622.5 37 20024.0 38 22142.0 39 24260.0 40 28652.5 41 33045.0 42 38915.5 43 44786.0 44 52873.5 45 60961.0 46 69961.5 47 78962.0 48 87429.5 49 95897.0 50 94144.0 51 92391.0 52 78607.5 53 64824.0 54 56893.5 55 48963.0 56 43824.5 57 38686.0 58 34687.5 59 30689.0 60 28935.5 61 27182.0 62 24079.0 63 20976.0 64 17934.5 65 14893.0 66 12705.5 67 10518.0 68 8696.5 69 6875.0 70 5747.0 71 4619.0 72 3609.5 73 2600.0 74 2225.5 75 1255.0 76 659.0 77 633.0 78 607.0 79 431.5 80 256.0 81 188.0 82 120.0 83 95.0 84 70.0 85 40.0 86 10.0 87 28.0 88 46.0 89 25.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 842160.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.299257870558932 #Duplication Level Percentage of deduplicated Percentage of total 1 71.10917952388392 18.701186492624924 2 11.480174701967087 6.038401497721989 3 4.957537154894057 3.911386441183076 4 2.794305139422952 2.939526057228494 5 1.6683889751365693 2.1938695942757085 6 1.1057340791628734 1.744799141050166 7 0.7762049836935405 1.4289530518598592 8 0.5609000578786737 1.1801004209410135 9 0.455177423761889 1.077374559993354 >10 3.3590112668743064 20.307752432724975 >50 1.4451729626923229 27.460969944142978 >100 0.2822852836409782 9.730937324429075 >500 0.0031922406873777826 0.5957104822820846 >1k 0.002280171919555559 1.506246818397564 >5k 4.560343839111118E-4 1.182785741144739 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9862 1.1710363826351287 No Hit GCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 4382 0.5203286786358886 TruSeq Adapter, Index 27 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 3119 0.3703571767835091 TruSeq Adapter, Index 27 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGCT 2138 0.25387099838510496 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 1714 0.20352427092239006 TruSeq Adapter, Index 27 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 1206 0.14320319179253346 TruSeq Adapter, Index 20 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTG 968 0.11494252873563218 No Hit ACCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTG 849 0.10081219720718153 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2693074950128242 0.0 2 0.0 0.0 0.0 1.5765412748171368 0.0 3 0.0 0.0 0.0 2.2591906526075807 0.0 4 0.0 0.0 0.0 3.0067920585161962 0.0 5 0.0 0.0 0.0 4.962596181248219 0.0 6 0.0 0.0 0.0 6.008834425762325 0.0 7 0.0 0.0 0.0 7.16764035337703 0.0 8 0.0 0.0 0.0 9.033437826541276 0.0 9 0.0 0.0 0.0 9.694832335898166 0.0 10 0.0 0.0 0.0 11.093497672651278 0.0 11 0.0 0.0 0.0 13.089080459770114 0.0 12 0.0 0.0 0.0 14.673577467464614 0.0 13 0.0 0.0 0.0 15.308492447990881 0.0 14 0.0 0.0 0.0 15.53374655647383 0.0 15 0.0 0.0 0.0 15.967868338557993 0.0 16 0.0 0.0 0.0 16.945592286501377 0.0 17 0.0 0.0 0.0 18.118647287926287 0.0 18 0.0 0.0 0.0 19.513750356226844 0.0 19 0.0 0.0 0.0 20.31953548019379 0.0 20 0.0 0.0 0.0 21.0000474969127 0.0 21 1.1874228175168615E-4 0.0 0.0 21.852617079889807 0.0 22 1.1874228175168615E-4 0.0 0.0 22.644153130046547 0.0 23 1.1874228175168615E-4 0.0 0.0 23.526645768025077 0.0 24 1.1874228175168615E-4 0.0 0.0 24.255960862543933 0.0 25 1.1874228175168615E-4 0.0 0.0 24.85430322029068 0.0 26 1.1874228175168615E-4 0.0 0.0 25.411442006269592 0.0 27 1.1874228175168615E-4 0.0 0.0 25.946850954687946 0.0 28 1.1874228175168615E-4 0.0 0.0 26.495440296380735 0.0 29 1.1874228175168615E-4 0.0 0.0 27.044504607200533 0.0 30 1.1874228175168615E-4 0.0 0.0 27.71884202526836 0.0 31 2.374845635033723E-4 0.0 0.0 28.353757005794623 0.0 32 2.374845635033723E-4 0.0 0.0 28.873491973021753 0.0 33 2.374845635033723E-4 0.0 0.0 29.407713498622588 0.0 34 2.374845635033723E-4 0.0 0.0 29.915811722238054 0.0 35 2.374845635033723E-4 0.0 0.0 30.522941008834426 0.0 36 2.374845635033723E-4 0.0 0.0 31.038876223045502 0.0 37 2.374845635033723E-4 0.0 0.0 31.530706754060986 0.0 38 2.374845635033723E-4 0.0 0.0 32.05032297900637 0.0 39 2.374845635033723E-4 0.0 0.0 32.59463759855609 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACTT 25 3.889914E-5 45.000004 9 GTACAAC 25 3.889914E-5 45.000004 10 ATCGTCC 25 3.889914E-5 45.000004 30 TGCGACG 25 3.889914E-5 45.000004 1 TCGCTAC 25 3.889914E-5 45.000004 25 AGCGCGT 25 3.889914E-5 45.000004 11 CAGCTCG 25 3.889914E-5 45.000004 27 TAGATCC 25 3.889914E-5 45.000004 17 ACGTAAC 50 2.1827873E-11 45.000004 11 CGCGTAA 25 3.889914E-5 45.000004 31 CGTCACA 25 3.889914E-5 45.000004 29 TACGTCA 25 3.889914E-5 45.000004 18 ATAGCGA 20 7.032213E-4 45.0 12 CGCGCAT 20 7.032213E-4 45.0 24 CGTCTAG 20 7.032213E-4 45.0 17 TAACGAG 35 1.2114106E-7 45.0 1 ACTTACG 20 7.032213E-4 45.0 1 GACCCGT 20 7.032213E-4 45.0 10 CGTTAAG 20 7.032213E-4 45.0 41 CTAACGG 35 1.2114106E-7 45.0 2 >>END_MODULE