##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934739.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1813396 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19983941731425 33.0 31.0 34.0 30.0 34.0 2 32.37937494071896 34.0 31.0 34.0 30.0 34.0 3 32.3814202744464 34.0 31.0 34.0 30.0 34.0 4 35.93840120966408 37.0 35.0 37.0 35.0 37.0 5 35.8256525325963 37.0 35.0 37.0 35.0 37.0 6 35.76062812535155 37.0 35.0 37.0 35.0 37.0 7 36.08328241597533 37.0 35.0 37.0 35.0 37.0 8 35.917986473996855 37.0 35.0 37.0 35.0 37.0 9 37.58848205245848 39.0 38.0 39.0 35.0 39.0 10 37.341961711617316 39.0 37.0 39.0 34.0 39.0 11 37.21596441152401 39.0 37.0 39.0 34.0 39.0 12 37.12979183807619 39.0 37.0 39.0 34.0 39.0 13 37.05210058917081 39.0 37.0 39.0 33.0 39.0 14 38.19777367988018 40.0 37.0 41.0 33.0 41.0 15 38.2754908470075 40.0 37.0 41.0 34.0 41.0 16 38.36188455251914 40.0 37.0 41.0 34.0 41.0 17 38.36659725730067 40.0 37.0 41.0 34.0 41.0 18 38.34598179327626 40.0 37.0 41.0 34.0 41.0 19 38.343262034326756 40.0 37.0 41.0 34.0 41.0 20 38.2858669590095 40.0 37.0 41.0 34.0 41.0 21 38.221347129915365 40.0 37.0 41.0 34.0 41.0 22 38.14980346267445 40.0 37.0 41.0 34.0 41.0 23 37.981240170376466 40.0 36.0 41.0 34.0 41.0 24 37.76030221749689 40.0 36.0 41.0 33.0 41.0 25 37.69973133281423 39.0 36.0 41.0 33.0 41.0 26 37.877898153519695 40.0 36.0 41.0 34.0 41.0 27 37.97418986255622 40.0 36.0 41.0 34.0 41.0 28 37.93992873040417 40.0 36.0 41.0 34.0 41.0 29 37.96188146439057 40.0 36.0 41.0 34.0 41.0 30 37.85081912610373 40.0 36.0 41.0 34.0 41.0 31 37.75386291797269 40.0 36.0 41.0 33.0 41.0 32 37.66635858907817 40.0 36.0 41.0 33.0 41.0 33 37.56419281833642 40.0 36.0 41.0 33.0 41.0 34 37.483035696560485 40.0 36.0 41.0 33.0 41.0 35 37.41475165931766 40.0 36.0 41.0 33.0 41.0 36 37.35032281972608 40.0 36.0 41.0 33.0 41.0 37 37.253465321419036 39.0 35.0 41.0 33.0 41.0 38 37.167034668654836 39.0 35.0 41.0 32.0 41.0 39 37.213047232926506 39.0 35.0 41.0 33.0 41.0 40 37.1422414078337 39.0 35.0 41.0 32.0 41.0 41 37.10242660731578 39.0 35.0 41.0 32.0 41.0 42 37.00387284410024 39.0 35.0 41.0 32.0 41.0 43 36.93568310506916 39.0 35.0 41.0 32.0 41.0 44 36.87967768760932 39.0 35.0 41.0 32.0 41.0 45 36.84667827655956 39.0 35.0 41.0 31.0 41.0 46 36.815843864219396 39.0 35.0 41.0 31.0 41.0 47 36.69487249337707 39.0 35.0 41.0 31.0 41.0 48 36.668142534780046 39.0 35.0 41.0 31.0 41.0 49 36.65315573652969 39.0 35.0 41.0 31.0 41.0 50 36.53185239186587 39.0 35.0 40.0 31.0 41.0 51 35.60018164813422 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 28.0 10 32.0 11 21.0 12 29.0 13 32.0 14 18.0 15 47.0 16 74.0 17 188.0 18 296.0 19 598.0 20 983.0 21 1685.0 22 2585.0 23 3909.0 24 5589.0 25 8183.0 26 10995.0 27 13716.0 28 15869.0 29 18588.0 30 23270.0 31 29719.0 32 39697.0 33 57319.0 34 108407.0 35 149810.0 36 135085.0 37 211049.0 38 395993.0 39 579223.0 40 351.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.187191325005685 22.15660561730587 27.44315086169816 12.213052195990286 2 30.946357000897763 24.441103873616132 26.954233934562556 17.65830519092355 3 30.026756428270495 24.083983862322405 28.960138877553497 16.929120831853606 4 27.570260439528926 26.09005424077256 28.058074463603095 18.281610856095416 5 24.664993195088112 30.11642244716543 26.161577504306837 19.057006853439624 6 26.584595973521502 33.004870419919314 25.177677683197714 15.232855923361472 7 80.73437903248933 5.0986105627232 8.809217622626276 5.357792782161205 8 80.71281727763821 4.076881166606743 8.83695563462145 6.373345921133608 9 74.68556233718392 6.710062225790726 11.593165530308879 7.011209906716459 10 39.5310235602152 28.754723182360607 17.630787759540663 14.08346549788353 11 26.75488420620758 23.65032237856486 28.832919009416585 20.761874405810975 12 24.974192068362346 21.615907391435737 32.39888033281203 21.01102020738989 13 22.231933896402108 25.546984773320336 33.04738733293776 19.173693997339797 14 18.97864559092443 28.695111271889868 30.331047382921327 21.995195754264373 15 17.05816049004189 25.926604007067404 36.62503942878445 20.390196074106264 16 19.155826967744495 26.82811696948708 31.98099036283305 22.03506569993537 17 19.890911858193135 24.574886014968598 29.080355311250273 26.45384681558799 18 20.735184151724166 24.408347652691415 32.67681190429448 22.179656291289934 19 21.27632353881888 26.185455355586978 29.523060600111613 23.01516050548253 20 22.03341134534321 27.34201465096427 29.335291353901738 21.28928264979078 21 22.18610827419935 26.52900965922501 30.379905988543044 20.904976078032597 22 20.559160823118614 25.198357115599677 28.527635442010457 25.71484661927125 23 19.475448274949322 26.624907080417078 29.200185728875542 24.699458915758058 24 20.95923890865536 24.09098729676254 30.790075637091952 24.159698157490144 25 18.658307396729672 27.340415441525185 29.038941301293264 24.96233586045188 26 18.19481238516022 26.893188250111944 31.095248914191938 23.8167504505359 27 20.15384394804003 27.408795431334358 30.32806954465544 22.10929107597017 28 17.666190947812833 27.00783502334846 31.784011876060163 23.541962152778545 29 19.623788736712775 23.47622913031682 32.538673295849335 24.361308837121072 30 20.733143781060505 24.90812817498219 30.617030146752285 23.74169789720502 31 20.251064852905817 28.297514718241356 26.908849473584368 24.54257095526846 32 22.04747335937655 27.873834507189827 27.875819732700414 22.20287240073321 33 21.968670935636784 25.5525544337806 28.047982900590934 24.430791729991686 34 20.098367924049683 25.455774690139382 28.571475838702632 25.8743815471083 35 20.2281244692279 25.43051821003245 29.1496176235086 25.191739697231053 36 22.249690635691266 25.175085861003332 29.17774165157528 23.397481851730124 37 20.64540784252309 27.446128699964046 29.800275284604133 22.10818817290873 38 20.977381664016022 28.962840990054023 26.325910060461144 23.73386728546881 39 23.414521704029344 24.39704289631167 27.326629153257205 24.86180624640178 40 21.817848941985094 23.38187577341077 29.337442014871545 25.462833269732588 41 19.12770293967782 25.87939975603784 27.693399566338517 27.29949773794582 42 22.35060626581287 24.447004404994825 29.391870280953526 23.810519048238774 43 23.62523133391714 23.590600177787973 29.7074659919841 23.076702496310787 44 20.788674950203927 24.47325349785706 28.19979750699792 26.538274044941097 45 21.354795091640216 23.02084045624894 27.889054569437672 27.73530988267317 46 22.64271014163481 24.150544062080208 28.978502213526447 24.228243582758537 47 19.211799298112492 24.635435393041565 31.116479798124626 25.036285510721324 48 20.27097225316478 23.63251049412263 30.227595075758412 25.86892217695418 49 22.399299435975376 21.59622057178906 31.93648822430401 24.06799176793155 50 20.68307198207121 21.849777985613734 30.76625293096489 26.700897101350172 51 20.116290098798057 21.749634387635133 27.55129050687219 30.582785006694625 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 394.0 1 817.0 2 1240.0 3 5279.0 4 9318.0 5 6363.0 6 3408.0 7 3278.0 8 3148.0 9 3430.5 10 3713.0 11 3664.0 12 3615.0 13 3669.5 14 3724.0 15 3659.0 16 3594.0 17 3690.0 18 3786.0 19 3647.0 20 3508.0 21 4006.0 22 4504.0 23 5388.5 24 6273.0 25 7740.0 26 11313.0 27 13419.0 28 16209.0 29 18999.0 30 21671.5 31 24344.0 32 28300.5 33 32257.0 34 38819.5 35 45382.0 36 49426.5 37 53471.0 38 58380.5 39 63290.0 40 72450.5 41 81611.0 42 96438.5 43 111266.0 44 125385.5 45 139505.0 46 163134.5 47 186764.0 48 212583.0 49 238402.0 50 228609.5 51 218817.0 52 181004.0 53 143191.0 54 120417.0 55 97643.0 56 83534.5 57 69426.0 58 63768.0 59 58110.0 60 54663.0 61 51216.0 62 44196.0 63 37176.0 64 31713.5 65 26251.0 66 21703.0 67 17155.0 68 13749.5 69 10344.0 70 8368.0 71 6392.0 72 5531.0 73 4670.0 74 3363.5 75 1706.0 76 1355.0 77 1064.5 78 774.0 79 530.0 80 286.0 81 266.5 82 247.0 83 175.5 84 104.0 85 60.5 86 17.0 87 14.0 88 11.0 89 8.5 90 6.0 91 4.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1813396.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.563240218041294 #Duplication Level Percentage of deduplicated Percentage of total 1 64.97672357858251 14.011086991062424 2 12.792919679632023 5.517136002840264 3 6.124529475816093 3.9619410092849083 4 3.529034245659188 3.043896527073729 5 2.282539010325466 2.460946849334913 6 1.492235931617251 1.9306465113273257 7 1.1076996139328668 1.6719915005266206 8 0.8272322721320222 1.4270246560079123 9 0.6448807294558031 1.2515146273117062 >10 4.060149667668883 18.291034337623852 >50 1.4857338091593029 23.64083189654725 >100 0.664114946165201 18.760431728252474 >500 0.008570900322625627 1.2358615495596668 >1k 0.002597242522007766 1.0797757137585704 >5k 0.0010388970088031065 1.715880099488334 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 9253 0.5102581013744378 No Hit CCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 9211 0.5079420049454174 No Hit CTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGCT 6743 0.3718437671639289 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5431 0.2994933263335752 No Hit TCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 4025 0.22195924111446147 No Hit ACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 2703 0.14905734875338866 No Hit CGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTG 2458 0.13554678625076927 No Hit ACCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTG 2008 0.11073146736840712 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.654354592157477E-4 0.0 0.0 0.38893876461622284 0.0 2 1.654354592157477E-4 0.0 0.0 1.8550829493392509 0.0 3 1.654354592157477E-4 0.0 0.0 2.6229240607126076 0.0 4 1.654354592157477E-4 0.0 0.0 3.472104272867041 0.0 5 1.654354592157477E-4 0.0 0.0 5.653977399310465 0.0 6 1.654354592157477E-4 0.0 0.0 6.778883376824477 0.0 7 2.2058061228766358E-4 0.0 0.0 8.053618735234885 0.0 8 2.2058061228766358E-4 0.0 0.0 10.160218727735144 0.0 9 2.2058061228766358E-4 0.0 0.0 10.926626065128632 0.0 10 2.2058061228766358E-4 0.0 0.0 12.46528612614123 0.0 11 2.2058061228766358E-4 0.0 0.0 14.746199947501815 0.0 12 2.2058061228766358E-4 0.0 0.0 16.564501079742097 0.0 13 2.2058061228766358E-4 0.0 0.0 17.26914584569504 0.0 14 2.2058061228766358E-4 0.0 0.0 17.535166064113962 0.0 15 2.2058061228766358E-4 0.0 0.0 18.044983004263823 0.0 16 2.2058061228766358E-4 0.0 0.0 19.13172853585207 0.0 17 2.2058061228766358E-4 0.0 0.0 20.47754599657218 0.0 18 2.2058061228766358E-4 0.0 0.0 22.012456187175886 0.0 19 2.7572576535957947E-4 0.0 0.0 22.895771249081832 0.0 20 2.7572576535957947E-4 0.0 0.0 23.72813218954933 0.0 21 2.7572576535957947E-4 0.0 0.0 24.7496410050535 0.0 22 2.7572576535957947E-4 0.0 0.0 25.80975142770801 0.0 23 2.7572576535957947E-4 0.0 0.0 26.852105111073367 0.0 24 2.7572576535957947E-4 0.0 0.0 27.662518280618244 0.0 25 2.7572576535957947E-4 0.0 0.0 28.382052237900602 0.0 26 2.7572576535957947E-4 0.0 0.0 29.03270989899614 0.0 27 3.308709184314954E-4 0.0 0.0 29.651107645544602 0.0 28 3.860160715034113E-4 0.0 0.0 30.282960809442613 0.0 29 3.860160715034113E-4 0.0 0.0 30.939243276151487 0.0 30 3.860160715034113E-4 0.0 0.0 31.720264079109032 0.0 31 3.860160715034113E-4 0.0 0.0 32.41525844327439 0.0 32 3.860160715034113E-4 0.0 0.0 33.07247837758548 0.0 33 3.860160715034113E-4 0.0 0.0 33.687126253725054 0.0 34 3.860160715034113E-4 0.0 0.0 34.27431184363481 0.0 35 4.4116122457532717E-4 0.0 0.0 34.92838850422081 0.0 36 4.963063776472431E-4 0.0 0.0 35.56647307041595 0.0 37 4.963063776472431E-4 0.0 0.0 36.20389589477423 0.0 38 6.065966837910749E-4 0.0 0.0 36.822348786475764 0.0 39 6.065966837910749E-4 0.0 0.0 37.44195972639181 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCA 25 3.8917E-5 45.000004 40 CGTTCCA 25 3.8917E-5 45.000004 37 TATTCGT 25 3.8917E-5 45.000004 29 AACGTAT 20 7.0343673E-4 45.0 36 CGAGTTA 20 7.0343673E-4 45.0 18 CGTAAAT 20 7.0343673E-4 45.0 16 CGCGTTG 20 7.0343673E-4 45.0 13 ATCGATT 20 7.0343673E-4 45.0 22 AGTCCGT 30 2.166198E-6 44.999996 15 ATATGCG 60 0.0 44.999996 1 GTCAACG 30 2.166198E-6 44.999996 1 CGCCGAT 30 2.166198E-6 44.999996 27 GCGATAT 80 0.0 42.1875 9 TCGATTG 65 0.0 41.538464 1 CGTTTTT 3285 0.0 41.36986 1 ACGGGTT 55 6.184564E-11 40.909092 5 CACGTAA 100 0.0 40.500004 27 TATTGCG 140 0.0 40.178574 1 GGTCGAC 40 3.4596997E-7 39.375 8 TATTACG 40 3.4596997E-7 39.375 1 >>END_MODULE