SRR2934738.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934738.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	976784
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC	6378	0.6529590984291307	No Hit
CCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC	5783	0.5920449147406183	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	4719	0.4831160215564546	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4073	0.4169806221232125	No Hit
CTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGCT	3614	0.3699896804206457	No Hit
TCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC	2499	0.2558395714917525	No Hit
ACTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC	1839	0.18827089714819242	No Hit
CGCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTG	1797	0.18397107241723862	No Hit
GCCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTG	1079	0.11046454487378991	No Hit
ACCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTG	1062	0.1087241396255467	No Hit
GGCAAGGTGGGGTGAGGCCCGGAGTTGGGGAAGCTAGGAGGCTTAAAGCCT	1047	0.10718848793592033	No Hit
AGCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTG	1007	0.10309341676358334	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTAG	35	1.2116834E-7	45.000004	1
TCGGTAT	35	1.2116834E-7	45.000004	5
TTGATCG	20	7.032766E-4	45.0	1
CTAGAAA	20	7.032766E-4	45.0	9
CTATGCG	40	6.8139343E-9	45.0	1
TCGTTCA	40	6.8139343E-9	45.0	23
AGTCCAT	20	7.032766E-4	45.0	11
ACGCCTA	20	7.032766E-4	45.0	33
CGTATTT	25	3.890375E-5	45.0	22
CTCGTAG	20	7.032766E-4	45.0	1
GATCGAC	25	3.890375E-5	45.0	3
CGCGGGT	80	0.0	45.0	4
ACGTTGC	20	7.032766E-4	45.0	21
CTATCCG	20	7.032766E-4	45.0	34
TAGACGT	20	7.032766E-4	45.0	25
ACGCAAT	20	7.032766E-4	45.0	33
CGTTGAG	40	6.8139343E-9	45.0	17
TAGCGGA	20	7.032766E-4	45.0	43
CCGGATC	20	7.032766E-4	45.0	13
ATAGCGT	20	7.032766E-4	45.0	14