SRR2934737.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934737.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	884885
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC	8212	0.9280301960141714	Illumina Single End Adapter 1 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC	6440	0.72777818586596	Illumina Single End Adapter 1 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4882	0.5517101092232324	No Hit
CTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGCT	4725	0.5339676907168728	Illumina Single End Adapter 1 (95% over 22bp)
TCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC	4089	0.46209394441085566	Illumina Single End Adapter 1 (95% over 21bp)
ACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC	2598	0.2935974731179758	Illumina Single End Adapter 1 (95% over 21bp)
CGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG	1948	0.22014160032094565	No Hit
ACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG	1546	0.17471196822185933	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC	1531	0.17301683269577403	No Hit
GCCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG	1418	0.16024681173259803	No Hit
GAATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTC	1386	0.15663052261028268	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG	1309	0.14792882690971143	No Hit
AGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG	1301	0.14702475462913261	No Hit
GGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG	1150	0.12996039033320714	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCC	1060	0.11978957717669526	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCCGT	20	7.0324045E-4	45.000004	10
CTTCGCG	30	2.164934E-6	45.000004	1
TCGCATA	20	7.0324045E-4	45.000004	35
TCGTTAG	30	2.164934E-6	45.000004	1
GCAAGTC	20	7.0324045E-4	45.000004	14
TCGCACA	20	7.0324045E-4	45.000004	29
ACCGGGT	30	2.164934E-6	45.000004	4
AGATCGA	20	7.0324045E-4	45.000004	14
CGAGTTA	30	2.164934E-6	45.000004	36
GGTAACG	45	3.8380676E-10	45.000004	1
GATCGAT	20	7.0324045E-4	45.000004	15
GATCGAA	20	7.0324045E-4	45.000004	9
GCGCGAG	45	3.8380676E-10	45.000004	1
CCTACGG	20	7.0324045E-4	45.000004	2
CGTCTGG	35	1.2115015E-7	45.000004	2
TTCGTAG	30	2.164934E-6	45.000004	1
ATAGACG	30	2.164934E-6	45.000004	1
TAACGTG	35	1.2115015E-7	45.000004	1
CCTCGTA	20	7.0324045E-4	45.000004	17
AGGCGAT	35	1.2115015E-7	45.000004	6