##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934737.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 884885 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96627923402476 33.0 31.0 34.0 30.0 34.0 2 32.157778694406616 33.0 31.0 34.0 30.0 34.0 3 32.155467659639385 34.0 31.0 34.0 30.0 34.0 4 35.77100979223289 37.0 35.0 37.0 35.0 37.0 5 35.64568955287975 37.0 35.0 37.0 33.0 37.0 6 35.589769292054896 37.0 35.0 37.0 33.0 37.0 7 35.975178695536705 37.0 35.0 37.0 35.0 37.0 8 35.83533001463467 37.0 35.0 37.0 35.0 37.0 9 37.62602485068681 39.0 38.0 39.0 35.0 39.0 10 37.18830356487001 39.0 37.0 39.0 34.0 39.0 11 37.08294863174311 39.0 37.0 39.0 33.0 39.0 12 36.972034784181 39.0 35.0 39.0 33.0 39.0 13 36.81441204224278 39.0 35.0 39.0 33.0 39.0 14 37.8016420212796 40.0 36.0 41.0 33.0 41.0 15 37.898690790328686 40.0 36.0 41.0 33.0 41.0 16 38.04387010741509 40.0 37.0 41.0 33.0 41.0 17 38.06010272521288 40.0 37.0 41.0 34.0 41.0 18 38.04796329466541 39.0 37.0 41.0 34.0 41.0 19 38.02716398176034 40.0 37.0 41.0 34.0 41.0 20 37.93042937782876 39.0 36.0 41.0 34.0 41.0 21 37.88172474389327 39.0 36.0 41.0 34.0 41.0 22 37.82543042316233 39.0 36.0 41.0 33.0 41.0 23 37.649487786548534 39.0 35.0 41.0 33.0 41.0 24 37.382436135769055 39.0 35.0 41.0 33.0 41.0 25 37.347071088333514 39.0 35.0 41.0 33.0 41.0 26 37.54769489820711 39.0 35.0 41.0 33.0 41.0 27 37.63540347050747 39.0 35.0 41.0 33.0 41.0 28 37.65382168304356 39.0 36.0 41.0 33.0 41.0 29 37.67836159500952 39.0 36.0 41.0 33.0 41.0 30 37.4470162789515 39.0 36.0 41.0 33.0 41.0 31 37.334035496137915 39.0 35.0 41.0 33.0 41.0 32 37.24608169423146 39.0 35.0 41.0 33.0 41.0 33 37.02313520966001 39.0 35.0 41.0 32.0 41.0 34 36.867243766139104 39.0 35.0 41.0 31.0 41.0 35 36.832071964153535 39.0 35.0 41.0 31.0 41.0 36 36.68607107138216 39.0 35.0 40.0 31.0 41.0 37 36.472091853743706 39.0 35.0 40.0 30.0 41.0 38 36.45059075473084 39.0 35.0 40.0 30.0 41.0 39 36.45637907750724 39.0 35.0 40.0 31.0 41.0 40 36.337767054476004 39.0 35.0 40.0 30.0 41.0 41 36.40736592890602 39.0 35.0 40.0 30.0 41.0 42 36.30883222113608 39.0 35.0 40.0 30.0 41.0 43 36.17130361572408 38.0 35.0 40.0 30.0 41.0 44 36.12226673522548 38.0 35.0 40.0 30.0 41.0 45 36.14155624742198 38.0 35.0 40.0 30.0 41.0 46 36.151219650011015 38.0 35.0 40.0 30.0 41.0 47 36.00882600563915 38.0 35.0 40.0 30.0 41.0 48 36.001486068811204 38.0 35.0 40.0 30.0 41.0 49 35.984669194302086 38.0 35.0 40.0 29.0 41.0 50 35.854255637738234 38.0 35.0 40.0 29.0 41.0 51 34.93201150431977 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 13.0 11 11.0 12 8.0 13 11.0 14 13.0 15 15.0 16 45.0 17 77.0 18 164.0 19 326.0 20 572.0 21 969.0 22 1525.0 23 2422.0 24 3576.0 25 5339.0 26 7165.0 27 8515.0 28 9160.0 29 10807.0 30 13229.0 31 17660.0 32 23449.0 33 33189.0 34 59434.0 35 84486.0 36 74592.0 37 115884.0 38 205152.0 39 206959.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.56149104120875 23.1593935935178 27.135729501573653 12.143385863699804 2 31.38091390406663 24.517875204122568 26.383202337026844 17.718008554783953 3 28.786452476875525 24.69213513620414 30.175559535984902 16.345852850935433 4 26.891629985817367 24.821869508467202 30.09351497652237 18.19298552919306 5 23.643072263627477 28.143205049243686 28.98625245088345 19.227470236245388 6 24.28937093520627 31.628403690875086 27.481650157930126 16.60057521598852 7 75.99778502291258 4.921882504506235 12.640738627053233 6.439593845527949 8 75.54687897297389 3.8238867197432436 12.231871938161456 8.397362369121412 9 71.52669555930997 4.704340111991954 14.750843329924226 9.01812099877385 10 36.46033100346372 23.057798470987755 23.11418997948886 17.367680546059656 11 25.820191324296378 25.940884973753654 27.274165569537285 20.964758132412687 12 24.978161003972268 22.33273250196353 33.37654045440933 19.31256603965487 13 21.40990072156269 26.913779756691547 35.648474095503936 16.027845426241825 14 16.995541793566396 30.509614243658778 31.55856410720037 20.93627985557445 15 14.714680438701075 26.21493188380411 40.65228815043763 18.418099527057187 16 15.685767077077811 26.414505839741885 34.59658599705047 23.303141086129838 17 16.565881442221304 25.68051215694695 30.19296292738605 27.5606434734457 18 17.664216254089517 25.29413426603457 35.62982760471699 21.411821875158918 19 18.79362855060262 26.969832238087438 31.484204162122765 22.752335049187185 20 19.234815823525093 29.019251089124577 31.431089915638754 20.314843171711576 21 18.605694525277297 28.35464495386406 32.74391587607429 20.29574464478435 22 16.20312243963905 26.538815778321478 29.626787661673546 27.631274120365923 23 16.146278894997653 27.27100131655526 30.688055510038026 25.894664278409056 24 19.678489295219155 24.360679636336926 32.32668651858716 23.63414454985676 25 15.941732541516696 27.87932895234974 29.66792295043989 26.511015555693678 26 15.658644908660445 28.215869858795212 33.219909931799045 22.905575300745294 27 18.406459596444734 29.389694706091753 30.299191420354056 21.904654277109454 28 14.227950524644445 26.02948405725038 32.561406284432444 27.18115913367274 29 17.8175695146827 24.502392966317657 32.905744814297904 24.774292704701743 30 19.338219090616295 31.47889273747436 27.742475010877122 21.440413161032225 31 19.236058922910885 31.695531057708067 24.573362640343095 24.495047379037953 32 23.38507263655729 29.35974731179758 25.30193188945456 21.953248162190565 33 22.675827932443198 30.970352079648766 23.47028144900185 22.883538538906187 34 18.443413550913395 27.437011589076548 28.740231781530934 25.37934307847912 35 22.282556490391407 26.688213722687127 27.637150590189684 23.39207919673178 36 24.048096645326794 29.41557377512332 26.334834470015878 20.201495109534008 37 21.37486792069026 29.257135107951882 28.02963096899597 21.338366002361887 38 23.26991642981856 28.24344406335286 24.209021511269828 24.277617995558746 39 24.520022375788944 27.87718178068336 26.869480214943188 20.733315628584506 40 23.21544607491369 26.812410652231645 29.25125863812812 20.72088463472655 41 22.687354854020576 26.83241325143945 25.730801177554145 24.749430716985824 42 25.18417647490917 23.136565768433186 28.542578979189386 23.13667877746826 43 25.76210468026919 22.946258553371344 28.05268481215073 23.23895195420874 44 21.236318843691553 24.90493114924538 26.82133836600236 27.037411641060704 45 21.951553026664484 24.7920351232081 26.096950451188572 27.159461398938845 46 24.74219813874119 25.834882498855784 27.71908214061714 21.703837221785882 47 19.6966837498658 25.382168304355936 31.748984331297287 23.17216361448098 48 22.22752109031117 22.484503636065703 29.543273984755082 25.744701288868043 49 23.78478559360821 19.739062138017935 32.86924289596953 23.606909372404324 50 21.59670465653729 20.5219887329992 31.108788147612405 26.772518462851103 51 20.59578363290145 20.51758138063138 26.235386519152204 32.651248467314964 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 300.0 1 425.5 2 551.0 3 3598.5 4 6646.0 5 4227.0 6 1808.0 7 1944.0 8 2080.0 9 2193.5 10 2307.0 11 2559.5 12 2812.0 13 2994.0 14 3176.0 15 3069.0 16 2962.0 17 2777.5 18 2593.0 19 2718.5 20 2844.0 21 2741.0 22 2638.0 23 2696.5 24 2755.0 25 3235.0 26 4365.0 27 5015.0 28 5836.5 29 6658.0 30 8048.0 31 9438.0 32 11456.5 33 13475.0 34 15815.0 35 18155.0 36 20752.5 37 23350.0 38 25843.0 39 28336.0 40 33162.5 41 37989.0 42 47211.0 43 56433.0 44 65726.0 45 75019.0 46 95796.0 47 116573.0 48 130518.5 49 144464.0 50 136423.5 51 128383.0 52 100953.5 53 73524.0 54 57181.5 55 40839.0 56 32486.5 57 24134.0 58 19976.5 59 15819.0 60 13694.5 61 11570.0 62 9374.0 63 7178.0 64 6174.0 65 5170.0 66 3837.0 67 2504.0 68 2050.0 69 1596.0 70 1191.0 71 786.0 72 667.0 73 548.0 74 442.5 75 255.0 76 173.0 77 171.5 78 170.0 79 104.0 80 38.0 81 24.0 82 10.0 83 11.0 84 12.0 85 7.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 884885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.343307202468697 #Duplication Level Percentage of deduplicated Percentage of total 1 65.03248840467477 17.131708201853304 2 12.898633050221303 6.795853058677912 3 6.280010201130453 4.963087138890502 4 3.713944505492132 3.913503241643996 5 2.327272903995601 3.065403252696877 6 1.6302133008667448 2.5767125874169903 7 1.1021176046005212 2.0323395841868317 8 0.8525882452712 1.7967995249914361 9 0.6774702392839621 1.6062125970588652 >10 4.333691395596707 22.99327399263745 >50 0.8759214422958067 16.5168265350643 >100 0.26134617934308846 10.27365036431154 >500 0.007801378487853386 1.357192348253776 >1k 0.005634328907894112 3.3045527160350834 >5k 8.668198319837096E-4 1.672884856281175 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 8212 0.9280301960141714 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 6440 0.72777818586596 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4882 0.5517101092232324 No Hit CTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGCT 4725 0.5339676907168728 Illumina Single End Adapter 1 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 4089 0.46209394441085566 Illumina Single End Adapter 1 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 2598 0.2935974731179758 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 1948 0.22014160032094565 No Hit ACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 1546 0.17471196822185933 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 1531 0.17301683269577403 No Hit GCCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 1418 0.16024681173259803 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTC 1386 0.15663052261028268 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 1309 0.14792882690971143 No Hit AGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 1301 0.14702475462913261 No Hit GGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 1150 0.12996039033320714 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCC 1060 0.11978957717669526 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.565610220537132 0.0 2 0.0 0.0 0.0 3.1277510636975427 0.0 3 0.0 0.0 0.0 4.4316493103623635 0.0 4 0.0 0.0 0.0 5.870254326833431 0.0 5 0.0 0.0 0.0 9.564406674313611 0.0 6 0.0 0.0 0.0 11.42555247292021 0.0 7 0.0 0.0 0.0 13.525599371669765 0.0 8 0.0 0.0 0.0 16.61165010142561 0.0 9 0.0 0.0 0.0 17.628505399006652 0.0 10 0.0 0.0 0.0 20.273368855840026 0.0 11 0.0 0.0 0.0 24.090136006373708 0.0 12 0.0 0.0 0.0 26.86349073608435 0.0 13 0.0 0.0 0.0 27.89469818111958 0.0 14 0.0 0.0 0.0 28.27101826791052 0.0 15 0.0 0.0 0.0 28.979245890708963 0.0 16 0.0 0.0 0.0 30.68477824802093 0.0 17 0.0 0.0 0.0 32.80200252010148 0.0 18 0.0 0.0 0.0 35.07371014312594 0.0 19 0.0 0.0 0.0 36.33726416426993 0.0 20 0.0 0.0 0.0 37.4692756685897 0.0 21 0.0 0.0 0.0 38.96122094961492 0.0 22 0.0 0.0 0.0 40.40366827327845 0.0 23 0.0 0.0 0.0 41.8267910519446 0.0 24 0.0 0.0 0.0 42.91077371635862 0.0 25 0.0 0.0 0.0 43.84784463517858 0.0 26 0.0 0.0 0.0 44.693943280765296 0.0 27 0.0 0.0 0.0 45.437429722506316 0.0 28 0.0 0.0 0.0 46.212671703102664 0.0 29 0.0 0.0 0.0 47.002943885363635 0.0 30 0.0 0.0 0.0 47.92532362962419 0.0 31 0.0 0.0 0.0 48.76023438073874 0.0 32 0.0 0.0 0.0 49.50213869598874 0.0 33 1.1300903507235404E-4 0.0 0.0 50.18222706905417 0.0 34 1.1300903507235404E-4 0.0 0.0 50.915994733778966 0.0 35 1.1300903507235404E-4 0.0 0.0 51.65869011227448 0.0 36 1.1300903507235404E-4 0.0 0.0 52.305779847098776 0.0 37 1.1300903507235404E-4 0.0 0.0 52.92687750385643 0.0 38 1.1300903507235404E-4 0.0 0.0 53.58639823253869 0.0 39 1.1300903507235404E-4 0.0 0.0 54.24716206060675 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCCGT 20 7.0324045E-4 45.000004 10 CTTCGCG 30 2.164934E-6 45.000004 1 TCGCATA 20 7.0324045E-4 45.000004 35 TCGTTAG 30 2.164934E-6 45.000004 1 GCAAGTC 20 7.0324045E-4 45.000004 14 TCGCACA 20 7.0324045E-4 45.000004 29 ACCGGGT 30 2.164934E-6 45.000004 4 AGATCGA 20 7.0324045E-4 45.000004 14 CGAGTTA 30 2.164934E-6 45.000004 36 GGTAACG 45 3.8380676E-10 45.000004 1 GATCGAT 20 7.0324045E-4 45.000004 15 GATCGAA 20 7.0324045E-4 45.000004 9 GCGCGAG 45 3.8380676E-10 45.000004 1 CCTACGG 20 7.0324045E-4 45.000004 2 CGTCTGG 35 1.2115015E-7 45.000004 2 TTCGTAG 30 2.164934E-6 45.000004 1 ATAGACG 30 2.164934E-6 45.000004 1 TAACGTG 35 1.2115015E-7 45.000004 1 CCTCGTA 20 7.0324045E-4 45.000004 17 AGGCGAT 35 1.2115015E-7 45.000004 6 >>END_MODULE