SRR2934736.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934736.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1666782
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC	10319	0.6190971584766334	No Hit
GCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC	9972	0.5982785991209408	No Hit
CTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGCT	6072	0.3642947908004766	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5645	0.33867656358180015	No Hit
TCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC	3956	0.23734357582455295	No Hit
ACTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC	2960	0.17758771093040362	No Hit
CGCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTG	2627	0.1576090934507332	No Hit
ACCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTG	1958	0.1174718709465305	No Hit
AGCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTG	1777	0.10661262240652947	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAACGAT	35	1.2123746E-7	45.000004	21
CGTTCAA	30	2.1660926E-6	45.000004	20
CTACGTT	30	2.1660926E-6	45.000004	30
CTTGCGA	30	2.1660926E-6	45.000004	21
CGCGTAA	35	1.2123746E-7	45.000004	31
GCGTAAC	35	1.2123746E-7	45.000004	32
CCGCAAT	35	1.2123746E-7	45.000004	33
CTTCGTA	25	3.891564E-5	45.0	22
GTACCGA	40	6.8175723E-9	45.0	36
CACGCAA	50	2.1827873E-11	45.0	45
GCACGGA	25	3.891564E-5	45.0	3
CGACATA	25	3.891564E-5	45.0	13
CCGCTAG	20	7.0342026E-4	45.0	1
CGTTCCG	20	7.0342026E-4	45.0	25
CGTTAGC	20	7.0342026E-4	45.0	12
ACGTCGC	20	7.0342026E-4	45.0	20
CGTCCGT	20	7.0342026E-4	45.0	30
CGATATC	25	3.891564E-5	45.0	10
ATACCGA	25	3.891564E-5	45.0	21
TCGAACG	20	7.0342026E-4	45.0	1