SRR2934734.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934734.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1072079
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	7896	0.7365128875763819	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	6770	0.631483314196062	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5378	0.5016421364470341	No Hit
CTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGCT	5060	0.47198014325436843	No Hit
TCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	2731	0.2547386899659447	No Hit
CGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG	2241	0.20903310297095642	No Hit
ACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	1993	0.1859004793490032	No Hit
GCCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG	1353	0.12620338613105936	No Hit
ACCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG	1192	0.11118583611842037	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCC	1078	0.10055229138897412	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCTAG	115	0.0	45.000004	1
AACCGTA	20	7.0330757E-4	45.0	20
AAACTCG	20	7.0330757E-4	45.0	37
CGGGTAT	70	0.0	45.0	6
ACTATCG	20	7.0330757E-4	45.0	1
GATACCG	20	7.0330757E-4	45.0	33
GGTACGA	25	3.890629E-5	45.0	8
CGAACTA	20	7.0330757E-4	45.0	45
CACGGGT	25	3.890629E-5	45.0	4
ACGTTGA	25	3.890629E-5	45.0	9
TAGCGCG	75	0.0	45.0	1
ATTACCG	20	7.0330757E-4	45.0	1
ATTGTCG	20	7.0330757E-4	45.0	42
CGATTTA	20	7.0330757E-4	45.0	11
GTCTAGC	40	6.8139343E-9	45.0	12
ATATGCG	40	6.8139343E-9	45.0	1
GCCATTA	25	3.890629E-5	45.0	8
ACGGGTC	20	7.0330757E-4	45.0	5
CCATGCG	20	7.0330757E-4	45.0	1
GCACCGT	20	7.0330757E-4	45.0	16