SRR2934733.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934733.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1809543
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	9408	0.5199102756883921	No Hit
CCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	7927	0.438066406822054	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6035	0.33350962093744113	No Hit
CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT	5691	0.31449929623114786	No Hit
TCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	3882	0.21452930380764645	No Hit
ACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	2698	0.1490984187720325	No Hit
CGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG	2302	0.12721444033106702	No Hit
ACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG	2005	0.11080145650034291	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGAAC	35	1.2124474E-7	45.000004	29
CGTAGAT	30	2.1661963E-6	45.000004	32
AACCGCG	25	3.8916973E-5	45.0	1
CGTATCC	25	3.8916973E-5	45.0	22
CGTATAG	25	3.8916973E-5	45.0	36
TACGCGA	25	3.8916973E-5	45.0	28
CGTAGTA	25	3.8916973E-5	45.0	15
TCTCGAT	25	3.8916973E-5	45.0	1
GTCGTTA	20	7.034363E-4	45.0	40
ACTCGTT	20	7.034363E-4	45.0	42
TCGTAGT	20	7.034363E-4	45.0	31
CGTAAGA	25	3.8916973E-5	45.0	25
GCGTGTA	20	7.034363E-4	45.0	5
CGCACCG	20	7.034363E-4	45.0	15
TGTCGCG	40	6.8193913E-9	45.0	1
CAATACG	20	7.034363E-4	45.0	1
GTAACGA	25	3.8916973E-5	45.0	23
TCGCGCG	25	3.8916973E-5	45.0	1
TCTCGAG	75	0.0	42.0	1
CGTTTTT	3865	0.0	41.856403	1