##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934733.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1809543 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16854752829858 33.0 31.0 34.0 30.0 34.0 2 32.345037393419226 34.0 31.0 34.0 30.0 34.0 3 32.35144508862182 34.0 31.0 34.0 30.0 34.0 4 35.912113721530794 37.0 35.0 37.0 35.0 37.0 5 35.79909568327473 37.0 35.0 37.0 35.0 37.0 6 35.728119751782636 37.0 35.0 37.0 33.0 37.0 7 36.07218783969212 37.0 35.0 37.0 35.0 37.0 8 35.90667864759224 37.0 35.0 37.0 35.0 37.0 9 37.59379080795538 39.0 38.0 39.0 35.0 39.0 10 37.30392038210753 39.0 37.0 39.0 34.0 39.0 11 37.194222519166445 39.0 37.0 39.0 34.0 39.0 12 37.14360918751309 39.0 37.0 39.0 34.0 39.0 13 37.083757059102766 39.0 37.0 39.0 33.0 39.0 14 38.24017500551244 40.0 37.0 41.0 33.0 41.0 15 38.31495355457152 40.0 38.0 41.0 34.0 41.0 16 38.412268733044755 40.0 38.0 41.0 34.0 41.0 17 38.40067851385681 40.0 38.0 41.0 34.0 41.0 18 38.38000975937018 40.0 37.0 41.0 34.0 41.0 19 38.35543007267581 40.0 37.0 41.0 34.0 41.0 20 38.28654748740428 40.0 37.0 41.0 34.0 41.0 21 38.226718016648405 40.0 37.0 41.0 34.0 41.0 22 38.1710553438078 40.0 37.0 41.0 34.0 41.0 23 37.977856287471475 40.0 36.0 41.0 34.0 41.0 24 37.72388166514971 40.0 36.0 41.0 33.0 41.0 25 37.65687911257152 39.0 36.0 41.0 33.0 41.0 26 37.81899297225874 40.0 36.0 41.0 33.0 41.0 27 37.90640343998457 40.0 36.0 41.0 34.0 41.0 28 37.88502124569574 40.0 36.0 41.0 34.0 41.0 29 37.87416712396445 40.0 36.0 41.0 34.0 41.0 30 37.74401989894686 40.0 36.0 41.0 33.0 41.0 31 37.66515799845596 40.0 36.0 41.0 33.0 41.0 32 37.52999956342568 40.0 36.0 41.0 33.0 41.0 33 37.36185545190139 40.0 36.0 41.0 32.0 41.0 34 37.34712466075689 40.0 36.0 41.0 33.0 41.0 35 37.27746232059697 40.0 36.0 41.0 32.0 41.0 36 37.20013450909981 40.0 35.0 41.0 32.0 41.0 37 37.13274843427318 39.0 35.0 41.0 32.0 41.0 38 37.01132385359176 39.0 35.0 41.0 31.0 41.0 39 37.021405957194716 39.0 35.0 41.0 32.0 41.0 40 36.974557664559505 39.0 35.0 41.0 31.0 41.0 41 36.93056865739029 39.0 35.0 41.0 31.0 41.0 42 36.85163381030459 39.0 35.0 41.0 31.0 41.0 43 36.78902021118039 39.0 35.0 41.0 31.0 41.0 44 36.72533949179434 39.0 35.0 41.0 31.0 41.0 45 36.67622211796017 39.0 35.0 41.0 31.0 41.0 46 36.63586220388242 39.0 35.0 41.0 31.0 41.0 47 36.498756315821176 39.0 35.0 41.0 31.0 41.0 48 36.45611571540439 39.0 35.0 41.0 31.0 41.0 49 36.42736702029186 39.0 35.0 41.0 31.0 41.0 50 36.3078898926414 39.0 35.0 40.0 31.0 41.0 51 35.40609258801808 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 12.0 10 16.0 11 21.0 12 16.0 13 22.0 14 32.0 15 37.0 16 96.0 17 177.0 18 333.0 19 694.0 20 1156.0 21 1888.0 22 2942.0 23 4410.0 24 6310.0 25 9088.0 26 12714.0 27 15653.0 28 17769.0 29 20623.0 30 25358.0 31 32213.0 32 41438.0 33 58478.0 34 102866.0 35 141958.0 36 135846.0 37 214927.0 38 388693.0 39 573350.0 40 399.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.503675789964646 22.254348197307277 25.387072868674576 12.854903144053498 2 30.725879407121027 24.583831387261867 26.617162454829757 18.073126750787353 3 30.130425195753848 24.250874392042633 28.653090863273214 16.96560954893031 4 28.394738340011816 26.0810049830261 27.48953741359006 18.034719263372022 5 24.975864071757346 29.42118534900801 26.58372859887828 19.019221980356367 6 26.908617258611706 32.784465470010936 25.00393745824222 15.30297981313514 7 79.84988474990647 5.237565506871071 9.65641601221966 5.256133731002801 8 80.40168152953537 4.472289412299127 9.092627254505697 6.033401803659819 9 74.7554493040508 6.90710306414382 11.394313370834515 6.943134260970864 10 37.13296672143188 33.278347074371815 17.11365797883775 12.475028225358557 11 25.734508657710816 23.46343800617062 31.03573664731924 19.766316688799325 12 25.329047168262925 21.228288026313827 33.54703369856367 19.895631106859575 13 21.16954391246851 24.138415058387668 35.113064458816396 19.578976570327423 14 17.55233227394983 28.676080093150592 31.62594091436346 22.145646718536117 15 16.018188017637602 26.76758717532548 37.34169345519835 19.872531351838557 16 18.72516983569885 25.581265546052233 34.611888194975194 21.08167642327372 17 18.87786032163922 24.730111414871047 30.55981537880006 25.83221288468967 18 19.227617138691926 25.884159702201053 32.98197390169783 21.90624925740919 19 20.986237961739512 26.98675853516606 29.791168267347057 22.235835235747366 20 23.112410149966042 27.00112680383942 30.568933703150464 19.317529343044075 21 22.089389420422727 27.230963840041383 30.461392738387538 20.218254001148356 22 20.164594043910533 25.30804739097109 29.075683749985494 25.45167481513288 23 18.64940484973278 27.13723851823361 30.751410715302153 23.461945916731462 24 21.271834932908476 23.965830046591876 31.661198435185018 23.101136585314634 25 19.08012133450269 27.07910229267832 29.03854730172204 24.802229071096956 26 18.397739097661674 28.49056363954877 29.22251640331288 23.889180859476674 27 22.318508043191017 26.960840388982188 29.10375713647037 21.616894431356425 28 18.340708123542797 26.574223436525134 31.2283267101141 23.85674172981797 29 19.998143177586826 25.185419744101132 29.52927893948914 25.287158138822896 30 22.88257311376408 26.13383600168661 27.868030767989488 23.115560116559816 31 22.288887304695162 27.65140148645266 25.49853747603677 24.561173732815412 32 21.808489767858514 30.29770500065486 24.487066624003962 23.406738607482662 33 22.294192511589944 30.397177629931978 25.349162744405636 21.95946711407245 34 20.40233362788284 26.43131442579701 27.341875821685363 25.82447612463478 35 19.577152905457346 28.43425107886356 25.59237332298818 26.39622269269092 36 22.044792524963487 29.44102461229161 25.44355121707525 23.070631645669653 37 22.04440568696074 28.518802813749105 28.087257390401888 21.349534108888264 38 19.848326345381125 31.23534505673532 25.9649535822028 22.951375015680757 39 20.398962611001785 29.27158956708959 27.294128959632346 23.035318862276277 40 20.66615714575448 26.66010147313438 29.068775928507918 23.604965452603228 41 17.95608062367128 28.496310947018117 26.523326607878346 27.02428182143226 42 21.564173937839552 27.23367170606059 26.98377435628775 24.218379999812107 43 23.05952386873371 26.68872748533746 27.286392199577463 22.96535644635137 44 21.033542723217963 26.72094556470888 27.058655141104687 25.18685657096847 45 20.629131222634665 25.70825893609602 26.535650161394344 27.12695967987497 46 22.26998750513251 26.712545653792148 26.943708991717795 24.073757849357545 47 19.062603099235552 26.261326754876784 30.24404504341704 24.43202510247062 48 19.832631774984073 25.164198916522018 28.941285175317745 26.061884133176168 49 20.516119263261498 24.538516078368957 30.880669870790584 24.064694787578965 50 19.566708279383246 24.596541778780608 29.407756544055598 26.42899339778054 51 18.639844424807812 24.22865883817074 26.413022514524386 30.71847422249706 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 446.0 1 976.0 2 1506.0 3 6207.5 4 10909.0 5 7577.5 6 4246.0 7 4240.0 8 4234.0 9 4396.5 10 4559.0 11 4335.5 12 4112.0 13 4082.5 14 4053.0 15 4237.5 16 4422.0 17 4400.0 18 4378.0 19 4791.5 20 5205.0 21 5243.0 22 5281.0 23 6642.5 24 8004.0 25 9865.5 26 15364.0 27 19001.0 28 21570.5 29 24140.0 30 27390.5 31 30641.0 32 35921.0 33 41201.0 34 45241.5 35 49282.0 36 55416.5 37 61551.0 38 64995.5 39 68440.0 40 75638.5 41 82837.0 42 94469.0 43 106101.0 44 120494.0 45 134887.0 46 156129.5 47 177372.0 48 198030.5 49 218689.0 50 209566.5 51 200444.0 52 166927.5 53 133411.0 54 114943.0 55 96475.0 56 84399.5 57 72324.0 58 66304.0 59 60284.0 60 57111.0 61 53938.0 62 48817.5 63 43697.0 64 34417.0 65 25137.0 66 20303.5 67 15470.0 68 12113.0 69 8756.0 70 7003.5 71 5251.0 72 4154.0 73 3057.0 74 2303.5 75 1538.0 76 1526.0 77 990.5 78 455.0 79 368.5 80 282.0 81 197.0 82 112.0 83 71.0 84 30.0 85 62.5 86 95.0 87 53.0 88 11.0 89 8.5 90 6.0 91 3.5 92 1.0 93 4.0 94 7.0 95 3.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1809543.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.405015476604365 #Duplication Level Percentage of deduplicated Percentage of total 1 64.85386532127123 13.881979909194259 2 12.797228895184704 5.478497651181543 3 6.05163778234846 3.886062011699176 4 3.58906301132393 3.0729579721558795 5 2.3342412479696706 2.498223501945955 6 1.5354234317527602 1.9719457391885293 7 1.113309473902014 1.6681284563386012 8 0.8357969269422 1.431219692519693 9 0.6256041743666724 1.2051960331092226 >10 4.037787313031682 18.031288019146462 >50 1.583051957375493 25.02141539421256 >100 0.6314475925787705 17.839009592392564 >500 0.006558449972918837 0.9086757633533088 >1k 0.003935069983751302 1.4735237119116413 >5k 0.001049351995667014 1.6318765516506308 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 9408 0.5199102756883921 No Hit CCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 7927 0.438066406822054 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6035 0.33350962093744113 No Hit CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT 5691 0.31449929623114786 No Hit TCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 3882 0.21452930380764645 No Hit ACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 2698 0.1490984187720325 No Hit CGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 2302 0.12721444033106702 No Hit ACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 2005 0.11080145650034291 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.33417277179928856 0.0 2 0.0 0.0 0.0 1.7360736937447743 0.0 3 0.0 0.0 0.0 2.4946630171264235 0.0 4 0.0 0.0 0.0 3.3192358512618934 0.0 5 0.0 0.0 0.0 5.5036547901873565 0.0 6 0.0 0.0 0.0 6.548614760743458 0.0 7 0.0 0.0 0.0 7.777985933464969 0.0 8 0.0 0.0 0.0 9.715546964067723 0.0 9 0.0 0.0 0.0 10.380134652782498 0.0 10 0.0 0.0 0.0 11.900021165565008 0.0 11 0.0 0.0 0.0 14.002596235624132 0.0 12 0.0 0.0 0.0 15.8378109832151 0.0 13 0.0 0.0 0.0 16.49841976675879 0.0 14 0.0 0.0 0.0 16.74268033420593 0.0 15 0.0 0.0 0.0 17.215562161274974 0.0 16 1.105251436412398E-4 0.0 0.0 18.192825481350816 0.0 17 1.105251436412398E-4 0.0 0.0 19.4893959414062 0.0 18 1.105251436412398E-4 0.0 0.0 20.966453961027728 0.0 19 1.105251436412398E-4 0.0 0.0 21.829102707147605 0.0 20 1.105251436412398E-4 0.0 0.0 22.665335943937226 0.0 21 1.105251436412398E-4 0.0 0.0 23.648843934628797 0.0 22 1.657877154618597E-4 0.0 0.0 24.694411793474927 0.0 23 2.210502872824796E-4 0.0 0.0 25.7315244788325 0.0 24 2.210502872824796E-4 0.0 0.0 26.50707941176308 0.0 25 2.210502872824796E-4 0.0 0.0 27.197529984089904 0.0 26 2.210502872824796E-4 0.0 0.0 27.85410459989069 0.0 27 2.210502872824796E-4 0.0 0.0 28.44618779437681 0.0 28 2.763128591030995E-4 0.0 0.0 29.09950191844018 0.0 29 2.763128591030995E-4 0.0 0.0 29.758287037113792 0.0 30 2.763128591030995E-4 0.0 0.0 30.529642014586003 0.0 31 3.315754309237194E-4 0.0 0.0 31.2390476490473 0.0 32 3.315754309237194E-4 0.0 0.0 31.90562479034762 0.0 33 3.315754309237194E-4 0.0 0.0 32.51732619783006 0.0 34 3.315754309237194E-4 0.0 0.0 33.1357143765028 0.0 35 3.315754309237194E-4 0.0 0.0 33.82041764136028 0.0 36 3.315754309237194E-4 0.0 0.0 34.480694849473046 0.0 37 4.421005745649592E-4 0.0 0.0 35.11356182196278 0.0 38 4.421005745649592E-4 0.0 0.0 35.73084474919911 0.0 39 4.973631463855791E-4 0.0 0.0 36.343872458405244 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGAAC 35 1.2124474E-7 45.000004 29 CGTAGAT 30 2.1661963E-6 45.000004 32 AACCGCG 25 3.8916973E-5 45.0 1 CGTATCC 25 3.8916973E-5 45.0 22 CGTATAG 25 3.8916973E-5 45.0 36 TACGCGA 25 3.8916973E-5 45.0 28 CGTAGTA 25 3.8916973E-5 45.0 15 TCTCGAT 25 3.8916973E-5 45.0 1 GTCGTTA 20 7.034363E-4 45.0 40 ACTCGTT 20 7.034363E-4 45.0 42 TCGTAGT 20 7.034363E-4 45.0 31 CGTAAGA 25 3.8916973E-5 45.0 25 GCGTGTA 20 7.034363E-4 45.0 5 CGCACCG 20 7.034363E-4 45.0 15 TGTCGCG 40 6.8193913E-9 45.0 1 CAATACG 20 7.034363E-4 45.0 1 GTAACGA 25 3.8916973E-5 45.0 23 TCGCGCG 25 3.8916973E-5 45.0 1 TCTCGAG 75 0.0 42.0 1 CGTTTTT 3865 0.0 41.856403 1 >>END_MODULE