SRR2934732.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934732.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1418821
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC	6383	0.4498805698534205	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC	4083	0.28777414487098796	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3459	0.2437939669627106	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGC	3304	0.23286940353998142	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCG	2995	0.21109075774886332	No Hit
GAATCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTC	2969	0.20925825033601841	No Hit
CTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGCT	2932	0.20665045132543147	No Hit
TCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC	2103	0.14822165727741554	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1576	0.11107814164013642	No Hit
ACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC	1570	0.1106552553140953	No Hit
GAGCGCCATTATTCCTGTCAGTTTAAGTTATGTTGGTGGTTGTTAAACAGG	1449	0.10212704773893255	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACTTA	20	7.033846E-4	45.000004	16
TCGCGAT	20	7.033846E-4	45.000004	40
GTTAACG	35	1.2121927E-7	45.0	1
GTTCGCA	25	3.89127E-5	45.0	29
ATACCCG	25	3.89127E-5	45.0	1
AACCGCA	30	2.1658634E-6	44.999996	37
CGACGGT	30	2.1658634E-6	44.999996	28
TATTGCG	95	0.0	42.63158	1
GCGTCAG	75	0.0	42.0	1
CGTTTTT	2085	0.0	40.89928	1
CTCGATC	50	1.0822987E-9	40.5	16
ATAACGG	150	0.0	40.5	2
ACGTAAG	50	1.0822987E-9	40.5	1
ACGATAG	95	0.0	40.263157	1
CAGTTCG	45	1.9288564E-8	40.0	1
TTTAGCG	125	0.0	39.600002	1
GCCGACG	40	3.4589902E-7	39.375004	1
CGTAAGG	195	0.0	39.230766	2
ACTACCG	35	6.2493273E-6	38.571426	1
AATTACG	35	6.2493273E-6	38.571426	1