##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934731.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2983357 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28918798521263 33.0 31.0 34.0 30.0 34.0 2 32.487647639890234 34.0 31.0 34.0 31.0 34.0 3 32.44491423587589 34.0 31.0 34.0 30.0 34.0 4 36.008015131947 37.0 35.0 37.0 35.0 37.0 5 35.915318884062486 37.0 35.0 37.0 35.0 37.0 6 35.86086445571214 37.0 35.0 37.0 35.0 37.0 7 36.15114885680795 37.0 35.0 37.0 35.0 37.0 8 36.006874135411884 37.0 36.0 37.0 35.0 37.0 9 37.71680358736819 39.0 38.0 39.0 35.0 39.0 10 37.45414243082541 39.0 37.0 39.0 35.0 39.0 11 37.35855916673734 39.0 37.0 39.0 34.0 39.0 12 37.3190292009974 39.0 37.0 39.0 34.0 39.0 13 37.33503767735474 39.0 37.0 39.0 34.0 39.0 14 38.575230185324784 40.0 38.0 41.0 34.0 41.0 15 38.623126900334086 40.0 38.0 41.0 35.0 41.0 16 38.66988597073699 40.0 38.0 41.0 35.0 41.0 17 38.63457608325118 40.0 38.0 41.0 35.0 41.0 18 38.52935635929592 40.0 38.0 41.0 35.0 41.0 19 38.41533614649538 40.0 37.0 41.0 34.0 41.0 20 38.30293458007205 40.0 37.0 41.0 34.0 41.0 21 38.23428506880001 40.0 37.0 41.0 34.0 41.0 22 38.19238160233589 40.0 36.0 41.0 34.0 41.0 23 38.0133222406839 40.0 36.0 41.0 34.0 41.0 24 37.79156165353325 40.0 36.0 41.0 33.0 41.0 25 37.722041981566406 40.0 36.0 41.0 33.0 41.0 26 37.88207646620904 40.0 36.0 41.0 34.0 41.0 27 37.95683017486677 40.0 36.0 41.0 34.0 41.0 28 37.89965163404849 40.0 36.0 41.0 34.0 41.0 29 37.88885942915984 40.0 36.0 41.0 34.0 41.0 30 37.73241083785816 40.0 36.0 41.0 33.0 41.0 31 37.580432713885735 40.0 36.0 41.0 33.0 41.0 32 37.35137028521897 40.0 36.0 41.0 33.0 41.0 33 37.05694993927981 40.0 35.0 41.0 32.0 41.0 34 36.83623381311724 40.0 35.0 41.0 31.0 41.0 35 36.67750993260277 40.0 35.0 41.0 31.0 41.0 36 36.54995831876641 40.0 35.0 41.0 30.0 41.0 37 36.4840661040566 40.0 35.0 41.0 30.0 41.0 38 36.430564629040376 39.0 35.0 41.0 30.0 41.0 39 36.42257363098013 39.0 35.0 41.0 30.0 41.0 40 36.36252215205891 39.0 35.0 41.0 30.0 41.0 41 36.27228890139531 39.0 35.0 41.0 30.0 41.0 42 36.16596940962815 39.0 35.0 41.0 29.0 41.0 43 36.11315776154178 39.0 35.0 41.0 29.0 41.0 44 36.067021144301535 39.0 35.0 41.0 29.0 41.0 45 36.010210645256336 39.0 35.0 41.0 29.0 41.0 46 35.96065472553234 39.0 35.0 41.0 29.0 41.0 47 35.85458998034764 39.0 35.0 41.0 28.0 41.0 48 35.78801028505807 39.0 35.0 41.0 28.0 41.0 49 35.74448783702386 39.0 35.0 41.0 28.0 41.0 50 35.64373623404775 39.0 35.0 41.0 27.0 41.0 51 34.75246073466903 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 32.0 10 37.0 11 44.0 12 28.0 13 32.0 14 58.0 15 83.0 16 178.0 17 325.0 18 616.0 19 1262.0 20 2107.0 21 3700.0 22 5861.0 23 9237.0 24 15194.0 25 27203.0 26 40065.0 27 44344.0 28 41625.0 29 39870.0 30 41675.0 31 48905.0 32 61423.0 33 84953.0 34 153700.0 35 205564.0 36 209803.0 37 325642.0 38 621317.0 39 997774.0 40 690.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.73008057701442 20.997989848348688 25.057309601231097 16.214619973405796 2 35.18093878808335 23.06750415722959 25.546691193846392 16.204865860840656 3 29.548257214942765 22.44143091155366 32.0764829686826 15.93382890482098 4 26.08410592496976 24.60262047083202 32.12320885499121 17.190064749207018 5 24.44957140563466 28.200647793743762 29.774143691150606 17.575637109470975 6 25.167051747410717 32.263017801758224 28.104413920291805 14.465516530539254 7 78.09464304808309 4.810051227526575 12.48861601209644 4.606689712293902 8 80.09530874112619 3.585893340957854 11.861738303528542 4.457059614387417 9 74.29405867283064 6.043125244481301 13.96172164444282 5.701094438245239 10 36.47552069698665 28.580555394476757 21.04649225687707 13.897431651659522 11 25.232984185265124 23.338574632536435 32.16058286018067 19.26785832201778 12 23.573947067012092 21.80644153549173 34.09662336756882 20.52298802992736 13 21.777648467816626 22.732780555595593 36.159098626144974 19.330472350442808 14 18.864520739556145 25.59127184577642 34.76271864212027 20.781488772547167 15 18.34175393692408 25.59646733528706 36.48520777097745 19.576570956811405 16 21.39462357337724 24.776049262625964 34.815142807247 19.014184356749794 17 21.23352987926018 24.81178082274431 32.40044687913649 21.554242418859022 18 21.657817016200205 24.80584790891603 33.38537761320553 20.15095746167824 19 21.45311472948092 26.67665988348025 31.698284851595034 20.171940535443795 20 22.930477311297306 25.92150386293025 31.55381672391202 19.59420210186042 21 21.848642318033008 26.914579783780486 32.30756493440108 18.929212963785428 22 21.550421220122164 23.675912738569334 32.02405880355586 22.749607237752638 23 20.206968190531676 26.145312143333836 32.183945803334964 21.463773862799524 24 20.47508896856796 23.955966382836515 33.650247020386765 21.918697628208758 25 20.024053440469913 26.109412986779656 31.70850823418049 22.15802533856994 26 19.39580144112823 26.918535059666006 32.69397527684417 20.99168822236159 27 20.579099316642292 26.135356915045705 32.05261723622081 21.2329265320912 28 19.388125524367346 26.48238209506941 32.33622392492752 21.793268455635715 29 20.847555287550232 24.601547853642725 32.29529687529853 22.25559998350851 30 21.33475812649978 24.948573033666438 32.109868178699365 21.60680066113442 31 21.96780338390612 26.41410330711343 29.81785284161433 21.800240467366123 32 23.092341949019175 26.52277283610376 29.813093102836834 20.571792112040228 33 22.501329877718288 26.90023352887368 28.547740012341798 22.05069658106623 34 21.26584247208765 26.724558944839654 30.437725019164652 21.57187356390804 35 21.8217933690135 26.775407703469618 29.68320586507079 21.719593062446098 36 21.533125267944804 29.209075548115766 28.17872617993757 21.079073004001867 37 22.577284582435155 29.440827899577553 28.062380734186355 19.919506783800934 38 22.726814122480146 27.52137943933629 27.714651649132172 22.037154789051392 39 22.322605038552208 26.9874842333653 27.844371290462387 22.845539437620104 40 22.354180207062043 25.895660492525703 29.91730456663416 21.83285473377809 41 20.590797547863026 27.808136941036558 28.80748096858673 22.793584542513685 42 21.77533563700221 27.64231702742917 28.812877573820366 21.769469761748258 43 22.20411435842241 26.691508927694542 29.352906809342628 21.75146990454042 44 22.304973893503192 25.87202939507407 28.58786259907882 23.235134112343914 45 21.904518969737783 24.44444295469835 28.85279904483439 24.798239030729476 46 21.83778206899141 25.951470105656142 28.285920860292617 23.924826965059832 47 20.817454967675676 26.09489913543703 30.427501636579198 22.6601442603081 48 21.25793192031661 24.946662434298005 30.25836331354243 23.537042331842954 49 21.804631493984797 24.40649912162708 30.411579975175616 23.377289409212505 50 20.260163299263212 24.294946933940523 31.033262194232876 24.41162757256339 51 20.336888947584885 23.61346630658014 29.12024943712737 26.929395308707605 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 438.0 1 1121.0 2 1804.0 3 23982.5 4 46161.0 5 32247.0 6 18333.0 7 17977.0 8 17621.0 9 17794.5 10 17968.0 11 17553.5 12 17139.0 13 16567.5 14 15996.0 15 15196.5 16 14397.0 17 14117.0 18 13837.0 19 13846.0 20 13855.0 21 13978.5 22 14102.0 23 15135.5 24 16169.0 25 18327.5 26 23399.5 27 26313.0 28 33480.0 29 40647.0 30 46269.5 31 51892.0 32 59028.5 33 66165.0 34 73830.0 35 81495.0 36 90042.5 37 98590.0 38 106104.0 39 113618.0 40 123860.5 41 134103.0 42 148018.0 43 161933.0 44 180770.5 45 199608.0 46 232248.0 47 264888.0 48 287776.0 49 310664.0 50 305213.5 51 299763.0 52 255699.0 53 211635.0 54 184817.5 55 158000.0 56 142046.5 57 126093.0 58 115968.0 59 105843.0 60 100525.0 61 95207.0 62 85440.5 63 75674.0 64 64183.0 65 52692.0 66 41390.5 67 30089.0 68 24687.5 69 19286.0 70 15555.5 71 11825.0 72 9778.0 73 7731.0 74 6501.0 75 4395.5 76 3520.0 77 2443.5 78 1367.0 79 984.0 80 601.0 81 478.0 82 355.0 83 232.0 84 109.0 85 73.0 86 37.0 87 24.5 88 12.0 89 11.0 90 10.0 91 7.0 92 4.0 93 5.0 94 6.0 95 4.5 96 3.0 97 2.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2983357.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.802145101530822 #Duplication Level Percentage of deduplicated Percentage of total 1 72.49010493090353 19.428903107832713 2 11.416876955063193 6.119935855118543 3 4.580077216997642 3.682676824385589 4 2.2504639660360883 2.412690470538631 5 1.3719881634622342 1.8386112917348798 6 0.9030165749892602 1.4521668763169728 7 0.6442460663463897 1.2087023585914474 8 0.48736913849676833 1.0450030694398764 9 0.3745044256330671 0.9033769761284631 >10 3.874952415514227 24.93530807019707 >50 1.4212271892691093 26.480732461319374 >100 0.17940212714762901 6.602991883327134 >500 0.003462498084536048 0.5823864667494081 >1k 0.0012824066979763116 0.6706518377723344 >5k 7.694440187857869E-4 1.3942010299077081 >10k+ 2.564813395952623E-4 1.2416614206398924 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25661 0.8601384279521358 No Hit CGCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTG 10464 0.3507458208990744 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTT 8713 0.292053549072404 No Hit CCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 7185 0.2408360782836248 Illumina Single End Adapter 1 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTC 7076 0.23718247598259276 No Hit CTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGCT 6005 0.20128331942841574 Illumina Single End Adapter 1 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 5924 0.19856825716801577 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCT 5660 0.18971916535634187 No Hit CGTCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCT 3928 0.13166375998581462 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.340771486617257E-4 0.0 0.0 0.21217708775718092 0.0 2 1.340771486617257E-4 0.0 0.0 0.8142840431098256 0.0 3 1.340771486617257E-4 0.0 0.0 1.4431393896204845 0.0 4 1.340771486617257E-4 0.0 0.0 1.9595040084039557 0.0 5 1.340771486617257E-4 0.0 0.0 3.291292326060877 0.0 6 1.340771486617257E-4 0.0 0.0 4.577460893885647 0.0 7 1.340771486617257E-4 0.0 0.0 5.650111602466617 0.0 8 1.340771486617257E-4 0.0 0.0 7.19679207014112 0.0 9 1.340771486617257E-4 0.0 0.0 7.901535082794315 0.0 10 1.340771486617257E-4 0.0 0.0 9.146977716713085 0.0 11 1.340771486617257E-4 0.0 0.0 10.705490492756985 0.0 12 1.340771486617257E-4 0.0 0.0 11.9315924979813 0.0 13 1.340771486617257E-4 0.0 0.0 12.470046327006791 0.0 14 1.340771486617257E-4 0.0 0.0 12.717552743436338 0.0 15 1.340771486617257E-4 0.0 0.0 13.063605864132251 0.0 16 1.340771486617257E-4 0.0 0.0 13.756483049128883 0.0 17 1.340771486617257E-4 0.0 0.0 14.657347410987018 0.0 18 1.340771486617257E-4 0.0 0.0 15.621194513429 0.0 19 1.340771486617257E-4 0.0 0.0 16.24371471466539 0.0 20 1.340771486617257E-4 0.0 0.0 16.848235058693948 0.0 21 1.340771486617257E-4 0.0 0.0 17.60091065199371 0.0 22 1.340771486617257E-4 0.0 0.0 18.394044024902147 0.0 23 1.340771486617257E-4 0.0 0.0 19.228774833182886 0.0 24 1.340771486617257E-4 0.0 0.0 19.86976416164743 0.0 25 1.340771486617257E-4 0.0 0.0 20.447670191666635 0.0 26 1.340771486617257E-4 0.0 0.0 20.996716115436403 0.0 27 1.6759643582715713E-4 0.0 0.0 21.527661624136837 0.0 28 1.6759643582715713E-4 0.0 0.0 22.092193458577032 0.0 29 1.6759643582715713E-4 0.0 0.0 22.678345233238932 0.0 30 1.6759643582715713E-4 0.0 0.0 23.376585504182035 0.0 31 1.6759643582715713E-4 0.0 0.0 24.004837503523714 0.0 32 1.6759643582715713E-4 0.0 0.0 24.619614749424894 0.0 33 1.6759643582715713E-4 0.0 0.0 25.192694002092274 0.0 34 1.6759643582715713E-4 0.0 0.0 25.73242156403005 0.0 35 1.6759643582715713E-4 0.0 0.0 26.29018250246283 0.0 36 1.6759643582715713E-4 0.0 0.0 26.852602621811602 0.0 37 1.6759643582715713E-4 0.0 0.0 27.404229530693108 3.3519287165431426E-4 38 1.6759643582715713E-4 0.0 0.0 27.97305183389048 3.3519287165431426E-4 39 1.6759643582715713E-4 0.0 0.0 28.55565056411284 3.3519287165431426E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 20 7.035099E-4 45.0 37 CGTACGA 30 2.166671E-6 44.999996 32 CGTTTTT 19060 0.0 43.890347 1 CGTAAGG 405 0.0 38.333332 2 TTATCCG 65 9.094947E-12 38.076927 1 CGGTCTA 90 0.0 37.5 31 CGTACCG 30 1.14035865E-4 37.499996 2 AACTCGC 30 1.14035865E-4 37.499996 38 GCGTAAC 60 1.5643309E-10 37.499996 32 TAGCACG 145 0.0 37.241383 1 GTTTTTT 23035 0.0 36.541134 2 TGACGTA 25 0.0021076463 36.0 32 CGGTCGA 25 0.0021076463 36.0 18 CGACTAT 25 0.0021076463 36.0 37 CGTTTCT 1175 0.0 35.425533 1 CGTTCTG 970 0.0 35.257732 1 TAGGGCG 1025 0.0 35.121952 5 CGAGGGA 1755 0.0 34.358974 4 GCGTAAG 210 0.0 34.285717 1 TGGGCGA 1725 0.0 34.173912 6 >>END_MODULE