##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934730.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 762292 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.094660576262115 33.0 31.0 34.0 30.0 34.0 2 32.28264365886039 34.0 31.0 34.0 30.0 34.0 3 32.294988009844 34.0 31.0 34.0 30.0 34.0 4 35.859131408961396 37.0 35.0 37.0 35.0 37.0 5 35.739758517733364 37.0 35.0 37.0 35.0 37.0 6 35.6714566071794 37.0 35.0 37.0 33.0 37.0 7 36.00265121501997 37.0 35.0 37.0 35.0 37.0 8 35.87262361404816 37.0 35.0 37.0 35.0 37.0 9 37.654654646775775 39.0 38.0 39.0 35.0 39.0 10 37.29596532562325 39.0 37.0 39.0 34.0 39.0 11 37.181484260624536 39.0 37.0 39.0 34.0 39.0 12 37.00634140198244 39.0 35.0 39.0 33.0 39.0 13 36.83516421528758 39.0 35.0 39.0 33.0 39.0 14 37.909138492861004 40.0 37.0 41.0 33.0 41.0 15 38.02116905332865 40.0 37.0 41.0 33.0 41.0 16 38.142573974277575 40.0 37.0 41.0 34.0 41.0 17 38.17476373882974 40.0 37.0 41.0 34.0 41.0 18 38.133514453778865 40.0 37.0 41.0 34.0 41.0 19 38.09899618518888 40.0 37.0 41.0 34.0 41.0 20 38.019144894607315 40.0 36.0 41.0 34.0 41.0 21 37.945585156344286 40.0 36.0 41.0 34.0 41.0 22 37.90260031588945 40.0 36.0 41.0 34.0 41.0 23 37.726457840302665 39.0 35.0 41.0 33.0 41.0 24 37.47412015343202 39.0 35.0 41.0 33.0 41.0 25 37.4075144432842 39.0 35.0 41.0 33.0 41.0 26 37.56552082404118 39.0 35.0 41.0 33.0 41.0 27 37.636254873460565 39.0 35.0 41.0 33.0 41.0 28 37.59057815115467 39.0 35.0 41.0 33.0 41.0 29 37.570576629428096 39.0 36.0 41.0 33.0 41.0 30 37.50191921206047 39.0 36.0 41.0 33.0 41.0 31 37.31190803524109 39.0 35.0 41.0 33.0 41.0 32 37.200475670740346 39.0 35.0 41.0 33.0 41.0 33 37.10745750972068 39.0 35.0 41.0 32.0 41.0 34 37.006835963121745 39.0 35.0 41.0 32.0 41.0 35 36.96878492756057 39.0 35.0 41.0 32.0 41.0 36 36.89384120520745 39.0 35.0 41.0 32.0 41.0 37 36.80356739936927 39.0 35.0 41.0 31.0 41.0 38 36.730405146584246 39.0 35.0 41.0 31.0 41.0 39 36.80148945548425 39.0 35.0 41.0 31.0 41.0 40 36.73782749917355 39.0 35.0 41.0 31.0 41.0 41 36.72033682630803 39.0 35.0 41.0 31.0 41.0 42 36.63193763019945 39.0 35.0 41.0 31.0 41.0 43 36.583130873733424 39.0 35.0 41.0 31.0 41.0 44 36.5071048889402 39.0 35.0 41.0 31.0 41.0 45 36.47695240144197 39.0 35.0 40.0 31.0 41.0 46 36.424952642819285 39.0 35.0 40.0 31.0 41.0 47 36.294454093706875 39.0 35.0 40.0 30.0 41.0 48 36.30525441694259 39.0 35.0 40.0 31.0 41.0 49 36.33679875953047 39.0 35.0 40.0 31.0 41.0 50 36.247561301968275 39.0 35.0 40.0 31.0 41.0 51 35.281267545769865 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 5.0 11 6.0 12 10.0 13 7.0 14 8.0 15 14.0 16 27.0 17 80.0 18 135.0 19 294.0 20 501.0 21 931.0 22 1341.0 23 2072.0 24 2901.0 25 4305.0 26 6004.0 27 6982.0 28 7660.0 29 8786.0 30 10856.0 31 13803.0 32 18490.0 33 26545.0 34 49983.0 35 74351.0 36 56883.0 37 89851.0 38 166691.0 39 212636.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.52144847381319 22.02108903149974 27.881441757226888 12.576020737460187 2 29.632345610343542 24.971008484937528 27.090799850975745 18.305846053743185 3 30.289705257302973 23.35561700765586 29.949678076117813 16.40499965892335 4 27.22303264365886 24.924700770833226 29.95151464268286 17.90075194282506 5 24.30420363850073 28.269613219081403 27.873439574336345 19.552743568081524 6 23.217874515277607 32.51063896774464 27.466246530201026 16.80523998677672 7 76.34987642530685 5.7571114481064996 11.787477764426232 6.105534362160432 8 77.89508482313863 3.8979813509783656 10.728303589700534 7.478630236182459 9 73.34184275841803 4.736636354572788 13.513850335566948 8.40767055144223 10 39.57289332696657 22.550807302188662 21.393507999559226 16.482791371285543 11 28.819402538659727 25.12068865998856 26.84050206482555 19.21940673652616 12 27.042130837002095 21.40059189916725 32.070650092090695 19.48662717173996 13 21.71674371500685 26.893631311885734 33.43089000015742 17.95873497295 14 17.473356666474267 31.077461130380485 29.879232630015796 21.569949573129456 15 14.391860336983727 25.107439144055032 40.5680500385679 19.93265048039334 16 16.294149748390378 24.8563542579484 35.74784990528564 23.10164608837558 17 17.040320507102265 24.31601013784744 30.260844925566584 28.382824429483716 18 18.137537846389574 25.341601381098055 34.81644829015653 21.704412482355842 19 19.80068005436237 27.211750877616453 30.354772187035937 22.63279688098524 20 22.94750568023802 26.96722515781354 29.8019656509579 20.28330351099054 21 19.33563516342819 28.4488096424992 31.55536198726997 20.660193206802642 22 18.129010930194728 25.66824786302362 28.98075802973139 27.221983177050262 23 17.634843340872003 27.272751124241108 29.25296343133602 25.83944210355087 24 20.25050767947191 23.50096813294643 31.917821517213874 24.330702670367785 25 16.7425343569131 27.34975573664685 29.90455101194818 26.003158894491875 26 17.677084371868 29.189208334863803 29.845518515214643 23.288188778053552 27 20.914426492735068 28.694384828910707 29.36473162515152 21.02645705320271 28 15.728224879704891 26.69567567283928 34.174174725695664 23.401924721760164 29 17.59771845959291 27.761802563846928 31.31201691740173 23.328462059158433 30 23.745625036075417 26.542322364658162 28.64584699826313 21.06620560100329 31 20.847129446458837 28.51322065560179 28.09605767868481 22.543592219254563 32 21.450441563075568 30.662659453332843 25.173555540396592 22.713343443194997 33 23.388806389152712 25.935861848215648 26.477386618251273 24.19794514438037 34 18.191060643427978 25.718491076910162 31.58527178561496 24.5051764940469 35 20.023298158710833 25.78106552344771 26.788159917721817 27.40747640011964 36 23.53232094787824 24.508587260524838 28.64715883152388 23.311932960073044 37 19.881357799898204 25.451401825022437 32.97004297565762 21.697197399421743 38 18.813131975673365 27.537610259585566 27.053806153022723 26.595451611718346 39 21.86091419036275 24.02596380389667 29.881331563232987 24.231790442507595 40 22.737349991866633 22.172343406463664 30.742681282238305 24.347625319431398 41 18.193946676601616 23.352599791156145 27.904792389268156 30.548661142974083 42 20.74192041894707 22.959180996258652 28.968164430428235 27.33073415436604 43 23.28071132846731 23.357584757546977 28.63705771541614 24.724646198569577 44 21.313486170653764 24.409281482686424 28.711176294648244 25.566056052011565 45 21.606418537778175 24.05534886893736 27.83906954290482 26.499163050379643 46 25.114260677010908 23.235321897645523 28.76181305851301 22.88860436683056 47 18.37301191669334 23.16684420143462 32.8059326347384 25.654211247133645 48 19.666217145135985 21.14019299690932 30.58985270736148 28.60373715059321 49 21.150818846321357 18.544599707198817 34.21221789025728 26.092363556222548 50 20.16038473445871 20.0126723092988 32.12876430554171 27.698178650700783 51 19.0163349477628 20.313869225965902 27.85651692527273 32.81327890099857 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 214.0 1 307.5 2 401.0 3 2578.5 4 4756.0 5 3190.0 6 1624.0 7 1747.5 8 1871.0 9 1966.0 10 2061.0 11 2071.0 12 2081.0 13 2044.5 14 2008.0 15 1972.0 16 1936.0 17 1981.5 18 2027.0 19 1812.5 20 1598.0 21 1663.5 22 1729.0 23 1893.0 24 2057.0 25 3226.0 26 4755.0 27 5115.0 28 5837.5 29 6560.0 30 7397.0 31 8234.0 32 9870.5 33 11507.0 34 13309.0 35 15111.0 36 17126.0 37 19141.0 38 21980.5 39 24820.0 40 27317.0 41 29814.0 42 37310.0 43 44806.0 44 55020.5 45 65235.0 46 80989.5 47 96744.0 48 104648.5 49 112553.0 50 108124.5 51 103696.0 52 83976.5 53 64257.0 54 51237.5 55 38218.0 56 32118.0 57 26018.0 58 22310.5 59 18603.0 60 16913.0 61 15223.0 62 13814.5 63 12406.0 64 9859.5 65 7313.0 66 5412.0 67 3511.0 68 2860.0 69 2209.0 70 1542.0 71 875.0 72 709.0 73 543.0 74 513.5 75 348.5 76 213.0 77 209.5 78 206.0 79 153.5 80 101.0 81 57.0 82 13.0 83 8.0 84 3.0 85 2.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 762292.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.23867020608127 #Duplication Level Percentage of deduplicated Percentage of total 1 65.83908436236369 16.6169093689206 2 12.637226993586292 6.3789360882102475 3 6.086719774292751 4.6086213906062445 4 3.4817339796952833 3.5149734263534445 5 2.1898365972368765 2.763428184143437 6 1.5621807233877578 2.3656418447928655 7 1.1023323276811228 1.9474981453092037 8 0.7905119906830621 1.5961177141442078 9 0.6034557765614134 1.3707379195729361 >10 4.21743461379762 23.161299840233845 >50 1.2348479691224918 22.016629308309014 >100 0.24413448369097107 8.827296495580054 >500 0.004725183555309117 0.8367890683997785 >1k 0.005250203950343464 3.244329936769624 >5k 5.250203950343463E-4 0.7507912686544964 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 5666 0.7432847255382452 TruSeq Adapter, Index 22 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 4853 0.6366326814396582 TruSeq Adapter, Index 22 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGCT 3885 0.5096472217995204 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2928 0.38410477874620225 No Hit TCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 2712 0.35576918031410537 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC 2112 0.2770591846693918 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTC 1944 0.255020385888872 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG 1844 0.24190205328141973 No Hit ACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 1629 0.21369763817539736 TruSeq Adapter, Index 20 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 1437 0.188510439569089 No Hit ACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 1140 0.1495489917249558 No Hit GCCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 983 0.12895320953125575 TruSeq Adapter, Index 22 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 892 0.11701552685847419 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCC 878 0.11517896029343086 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.536670986970872 0.0 2 0.0 0.0 0.0 2.6049073058617958 0.0 3 0.0 0.0 0.0 3.6644750305657148 0.0 4 1.3118332607452263E-4 0.0 0.0 4.842632482041003 0.0 5 1.3118332607452263E-4 0.0 0.0 7.8509285155819555 0.0 6 1.3118332607452263E-4 0.0 0.0 9.358618482156444 0.0 7 1.3118332607452263E-4 0.0 0.0 11.120148184685133 0.0 8 1.3118332607452263E-4 0.0 0.0 13.786711653801955 0.0 9 1.3118332607452263E-4 0.0 0.0 14.743694017515597 0.0 10 1.3118332607452263E-4 0.0 0.0 17.065245339056425 0.0 11 1.3118332607452263E-4 0.0 0.0 20.146610485220886 0.0 12 1.3118332607452263E-4 0.0 0.0 22.725805859172077 0.0 13 1.3118332607452263E-4 0.0 0.0 23.643170858411214 0.0 14 1.3118332607452263E-4 0.0 0.0 23.963520540685195 0.0 15 1.3118332607452263E-4 0.0 0.0 24.556469174542038 0.0 16 1.3118332607452263E-4 0.0 0.0 25.93953498134573 0.0 17 1.3118332607452263E-4 0.0 0.0 27.656199986356935 0.0 18 1.3118332607452263E-4 0.0 0.0 29.71171152261863 0.0 19 1.3118332607452263E-4 0.0 0.0 30.753175948324266 0.0 20 1.3118332607452263E-4 0.0 0.0 31.684839930105525 0.0 21 1.3118332607452263E-4 0.0 0.0 32.92386644487939 0.0 22 1.3118332607452263E-4 0.0 0.0 34.10687767941943 0.0 23 1.3118332607452263E-4 0.0 0.0 35.310353512827106 0.0 24 1.3118332607452263E-4 0.0 0.0 36.24162394463014 0.0 25 1.3118332607452263E-4 0.0 0.0 37.03869383385894 0.0 26 1.3118332607452263E-4 0.0 0.0 37.708909446773674 0.0 27 1.3118332607452263E-4 0.0 0.0 38.40864130805518 0.0 28 1.3118332607452263E-4 0.0 0.0 39.04934067260315 0.0 29 1.3118332607452263E-4 0.0 0.0 39.73319935142963 0.0 30 1.3118332607452263E-4 0.0 0.0 40.48658519307562 0.0 31 1.3118332607452263E-4 0.0 0.0 41.231575301852835 0.0 32 1.3118332607452263E-4 0.0 0.0 41.920418947070154 0.0 33 1.3118332607452263E-4 0.0 0.0 42.525698813577996 0.0 34 1.3118332607452263E-4 0.0 0.0 43.13832494634602 0.0 35 1.3118332607452263E-4 0.0 0.0 43.83936864088827 0.0 36 1.3118332607452263E-4 0.0 0.0 44.482560488631655 0.0 37 1.3118332607452263E-4 0.0 0.0 45.101614604377325 0.0 38 1.3118332607452263E-4 0.0 0.0 45.67698467254018 0.0 39 1.3118332607452263E-4 0.0 0.0 46.24513965776894 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 30 2.1645355E-6 45.000004 1 GGTACGA 30 2.1645355E-6 45.000004 14 TCACCGC 30 2.1645355E-6 45.000004 42 GCGGTCC 30 2.1645355E-6 45.000004 21 TCCGAGC 30 2.1645355E-6 45.000004 23 ACCGCGT 30 2.1645355E-6 45.000004 44 TAGCGCG 60 0.0 45.000004 1 CAATTCG 30 2.1645355E-6 45.000004 1 TCTAGCG 115 0.0 45.000004 1 ATCGTAG 30 2.1645355E-6 45.000004 1 GCCGATC 30 2.1645355E-6 45.000004 9 TCGTGCG 30 2.1645355E-6 45.000004 1 AGGTTCG 30 2.1645355E-6 45.000004 1 ATCCAAC 30 2.1645355E-6 45.000004 14 CCGCGTT 30 2.1645355E-6 45.000004 45 AGTACGT 30 2.1645355E-6 45.000004 10 TCCGGAA 25 3.8895647E-5 45.0 45 TCACGCC 20 7.0317904E-4 45.0 12 TCACGAC 20 7.0317904E-4 45.0 25 CTTCGTT 20 7.0317904E-4 45.0 31 >>END_MODULE