##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934728.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1084723 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.028361157641164 33.0 31.0 34.0 30.0 34.0 2 32.201857985863676 33.0 31.0 34.0 30.0 34.0 3 32.231047926521335 34.0 31.0 34.0 30.0 34.0 4 35.83501502226836 37.0 35.0 37.0 35.0 37.0 5 35.70202991915909 37.0 35.0 37.0 35.0 37.0 6 35.57467390292268 37.0 35.0 37.0 33.0 37.0 7 35.886134063719496 37.0 35.0 37.0 35.0 37.0 8 35.403167444591844 37.0 35.0 37.0 33.0 37.0 9 37.32848201798985 39.0 37.0 39.0 34.0 39.0 10 37.155414792532284 39.0 37.0 39.0 34.0 39.0 11 37.048728569413576 39.0 37.0 39.0 33.0 39.0 12 36.83592032251552 39.0 35.0 39.0 33.0 39.0 13 36.57519016375609 39.0 35.0 39.0 32.0 39.0 14 37.607084020528745 39.0 36.0 41.0 33.0 41.0 15 37.58257638125125 39.0 36.0 41.0 33.0 41.0 16 37.893419794731 40.0 36.0 41.0 33.0 41.0 17 37.73648940789492 39.0 36.0 41.0 33.0 41.0 18 37.769471099995116 39.0 36.0 41.0 33.0 41.0 19 37.724094538421326 39.0 36.0 41.0 33.0 41.0 20 37.50898155565983 39.0 35.0 41.0 32.0 41.0 21 37.61167966384045 39.0 35.0 41.0 33.0 41.0 22 37.525269584953946 39.0 35.0 41.0 33.0 41.0 23 37.24003363070572 39.0 35.0 41.0 32.0 41.0 24 36.99745557160676 39.0 35.0 41.0 32.0 41.0 25 36.989203695321294 39.0 35.0 40.0 32.0 41.0 26 37.12276221671339 39.0 35.0 41.0 32.0 41.0 27 37.118202527281156 39.0 35.0 41.0 32.0 41.0 28 37.10729559528101 39.0 35.0 41.0 32.0 41.0 29 37.07276696446927 39.0 35.0 41.0 32.0 41.0 30 36.97243904665062 39.0 35.0 41.0 32.0 41.0 31 36.9402289801175 39.0 35.0 41.0 32.0 41.0 32 36.71647508165679 39.0 35.0 40.0 31.0 41.0 33 36.56795421503923 39.0 35.0 40.0 31.0 41.0 34 36.43038637513909 39.0 35.0 40.0 30.0 41.0 35 36.37668234194352 39.0 35.0 41.0 30.0 41.0 36 36.25219894848731 39.0 35.0 40.0 30.0 41.0 37 36.11704370608902 39.0 35.0 40.0 30.0 41.0 38 36.04090906157609 38.0 35.0 40.0 30.0 41.0 39 36.10236807000497 39.0 35.0 40.0 30.0 41.0 40 36.02630072377925 38.0 35.0 40.0 30.0 41.0 41 35.921537572264995 38.0 35.0 40.0 29.0 41.0 42 35.91692164727769 38.0 35.0 40.0 30.0 41.0 43 35.832238276500085 38.0 35.0 40.0 29.0 41.0 44 35.90994475087188 38.0 35.0 40.0 30.0 41.0 45 35.85952266154585 38.0 35.0 40.0 29.0 41.0 46 35.7674309478088 38.0 35.0 40.0 29.0 41.0 47 35.454900467677 38.0 35.0 40.0 28.0 41.0 48 35.50664270970561 38.0 35.0 40.0 28.0 41.0 49 35.6076703453324 38.0 35.0 40.0 28.0 41.0 50 35.47908175635623 38.0 35.0 40.0 28.0 41.0 51 34.48987621724625 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 12.0 10 17.0 11 16.0 12 10.0 13 14.0 14 20.0 15 25.0 16 77.0 17 127.0 18 296.0 19 674.0 20 1402.0 21 2680.0 22 4223.0 23 5507.0 24 7062.0 25 8942.0 26 10787.0 27 11753.0 28 12798.0 29 14550.0 30 18184.0 31 23907.0 32 32454.0 33 44612.0 34 77020.0 35 110181.0 36 87711.0 37 128048.0 38 217875.0 39 263562.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.343749510243626 18.58262431975721 20.41811596140213 11.655510208597034 2 27.761280990630787 36.476040426910835 20.767237349996268 14.995441232462111 3 25.762521860419664 35.30763153358046 24.205995447685723 14.72385115831415 4 23.396756591314098 22.50851138954369 37.82652345345309 16.26820856568912 5 32.32650178893598 25.331536253956077 23.50010094743082 18.841861009677125 6 22.663942776174192 38.72601576623709 25.08778738903849 13.522254068550218 7 68.1583224472976 4.913512481988489 21.407308593991278 5.520856476722629 8 65.58374810896423 14.397131802312666 12.597962797875587 7.421157290847526 9 61.87736408281192 5.473378917935731 12.795432566655265 19.85382443259708 10 43.88696469052468 17.764258709366352 22.127123698861368 16.221652901247598 11 34.55877675683101 20.475734357988166 24.61494777929481 20.35054110588602 12 25.956857188425065 18.440468211700132 30.849534858208038 24.753139741666764 13 22.985315144972496 23.892182612519512 37.42642130755963 15.69608093494837 14 18.91542817843818 32.23634052195814 27.483329845499725 21.36490145410395 15 14.510524806793992 21.873326185579174 44.35067754624914 19.265471461377697 16 15.939092284389655 24.002533365661094 30.484833455177036 29.573540894772215 17 16.79857438258431 24.22019262060452 32.63164881725565 26.349584179555517 18 17.265882626255735 24.00778816342974 33.26775591556554 25.45857329474898 19 18.522240240135037 25.664893249244276 29.492045434640918 26.320821075979765 20 21.31244566585202 25.668949584363936 33.73303599167714 19.28556875810691 21 18.96852929273188 32.21172594293659 29.619819990910123 19.19992477342142 22 17.017985236783954 23.6792250187375 30.69843637500081 28.604353369477735 23 18.166849969992338 29.76603243408686 29.365561530455242 22.70155606546556 24 20.90257143989756 23.324203506332953 28.367149954412323 27.406075099357164 25 15.781909298502935 33.749076953286696 27.03473605703945 23.434277691170927 26 16.2975248058721 26.34064180440536 30.967629523850785 26.394203865871745 27 21.368957789223607 30.19803212433036 25.684898356538948 22.748111729907084 28 14.66586400398996 26.278690504396053 36.022284030116445 23.033161461497546 29 21.45819716185607 25.804652432003376 27.984748179950085 24.752402226190465 30 19.197988795296126 32.98685470852927 28.607672189121093 19.207484307053505 31 22.639696954890788 24.39406189414256 26.480216608295386 26.48602454267126 32 29.655958249248886 29.324352853216908 22.167687050057943 18.85200184747627 33 24.467352494600004 25.2951214273137 22.862795386471937 27.374730691614356 34 23.294334129542747 26.446475275254606 25.181636233397835 25.07755436180481 35 24.76964165044901 27.140846096192302 22.848690402987675 25.240821850371013 36 21.99427872369259 32.411500447579705 25.876560190942755 19.717660637784945 37 23.31848776139162 27.06810863234208 29.9974279147764 19.6159756914899 38 25.487612966628348 25.053769487694094 25.53002010651567 23.928597439161887 39 27.81604151474616 23.970728010745603 25.088248336211176 23.12498213829706 40 28.12524487818549 21.330146037283253 26.655376533916954 23.889232550614302 41 19.040805809409406 28.55669143182176 22.84030116444475 29.562201594324083 42 24.280484510792157 23.082390619540657 30.463076748626143 22.17404812104104 43 24.04429517950666 27.875780268326565 24.72686575282353 23.353058799343245 44 22.881509841683084 23.142129373121065 28.665751532879824 25.31060925231603 45 21.17775690199249 21.379743953064516 27.17643121792384 30.266067927019158 46 29.657709848505103 25.047684985014605 24.40429492137624 20.89031024510405 47 18.56639897927858 22.51985068999182 36.779620234843364 22.13413009588623 48 22.311594757371235 23.73426211115649 26.821778463257438 27.132364668214837 49 21.884204538854622 18.546486061418445 35.685608215184885 23.883701184542044 50 23.416208562001543 20.137491322669472 29.693940296278402 26.752359819050575 51 21.203846511966653 20.196215992469966 24.96038159050744 33.63955590505594 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 290.0 1 479.5 2 669.0 3 3589.5 4 6510.0 5 4528.5 6 2547.0 7 2507.0 8 2467.0 9 2687.5 10 2908.0 11 3030.0 12 3152.0 13 3073.5 14 2995.0 15 2866.5 16 2738.0 17 2633.0 18 2528.0 19 2631.5 20 2735.0 21 2699.0 22 2663.0 23 2983.5 24 3304.0 25 3374.0 26 4523.0 27 5602.0 28 6174.0 29 6746.0 30 8230.5 31 9715.0 32 11137.0 33 12559.0 34 14226.5 35 15894.0 36 19306.0 37 22718.0 38 25251.0 39 27784.0 40 33265.5 41 38747.0 42 49603.0 43 60459.0 44 67715.5 45 74972.0 46 146984.5 47 218997.0 48 179512.0 49 140027.0 50 131751.0 51 123475.0 52 102330.0 53 81185.0 54 69410.0 55 57635.0 56 49283.0 57 40931.0 58 35518.0 59 30105.0 60 26987.0 61 23869.0 62 20712.0 63 17555.0 64 14579.5 65 11604.0 66 9713.0 67 7822.0 68 7043.5 69 6265.0 70 5061.0 71 3857.0 72 3602.0 73 3347.0 74 2560.0 75 1378.0 76 983.0 77 730.0 78 477.0 79 338.0 80 199.0 81 236.0 82 273.0 83 191.5 84 110.0 85 87.0 86 64.0 87 38.5 88 13.0 89 10.0 90 7.0 91 5.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1084723.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.17393501347427 #Duplication Level Percentage of deduplicated Percentage of total 1 68.02323239091788 15.083427344426712 2 12.192848307273755 5.40726851989276 3 5.591970810716684 3.7198799206223034 4 3.22016353814206 2.8561478811008567 5 2.076817834007896 2.3025611843057745 6 1.425857817935437 1.8970127156012768 7 0.9498075528553026 1.4742679666624356 8 0.7090615461014962 1.2578147715046535 9 0.5311660619492945 1.0600237565124035 >10 3.6312511200092197 16.969962720011505 >50 1.2196320402979168 19.665505443324662 >100 0.4131079315812182 12.244698449248066 >500 0.005865629860179569 0.9361827776198418 >1k 0.006284603421620966 3.3505439986959997 >5k 0.0012569206843241931 1.78299294116106 >10k+ 0.001675894245765591 9.991709609309712 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC 36635 3.377359934287371 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCG 32385 2.9855548375022933 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 28342 2.612832953666512 No Hit GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 10188 0.9392259590697348 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCT 7000 0.6453260417636576 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGGCGAT 6804 0.6272569125942752 No Hit CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 5388 0.4967166732889411 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATGGCGATCGTA 4750 0.4378998140539106 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTC 4536 0.4181712750628502 No Hit GAACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCT 4142 0.38184863785501 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3856 0.3554824595772377 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 3768 0.3473697893379231 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 2370 0.21848895985426697 No Hit CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1946 0.1794006396102968 No Hit ACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 1809 0.16677068707863668 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATG 1590 0.14658120091488794 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAATGGCGA 1376 0.12685266192382755 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTAT 1282 0.11818685507728702 No Hit GAATGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTT 1229 0.11330081504679075 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAATGGCGATCGT 1192 0.10988980596889712 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC 1164 0.1073085018018425 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.37023276910326414 0.0 2 0.0 0.0 0.0 2.310359418948432 0.0 3 0.0 0.0 0.0 3.085395995106585 0.0 4 0.0 0.0 0.0 4.315018672969965 0.0 5 0.0 0.0 0.0 9.108961458363103 0.0 6 9.218943453766538E-5 0.0 0.0 10.277185972824398 0.0 7 9.218943453766538E-5 0.0 0.0 12.157389490220083 0.0 8 9.218943453766538E-5 0.0 0.0 14.275902695895635 0.0 9 9.218943453766538E-5 0.0 0.0 14.916250508194258 0.0 10 9.218943453766538E-5 0.0 0.0 19.515489207843846 0.0 11 9.218943453766538E-5 0.0 0.0 21.635108686733847 0.0 12 9.218943453766538E-5 0.0 0.0 26.89488468484581 0.0 13 9.218943453766538E-5 0.0 0.0 27.74265872485418 0.0 14 9.218943453766538E-5 0.0 0.0 28.119252564940542 0.0 15 9.218943453766538E-5 0.0 0.0 29.0837384290736 0.0 16 9.218943453766538E-5 0.0 0.0 30.204946331920684 0.0 17 9.218943453766538E-5 0.0 0.0 31.46987756321199 0.0 18 9.218943453766538E-5 0.0 0.0 32.74347460134984 0.0 19 9.218943453766538E-5 0.0 0.0 34.260728314970734 0.0 20 9.218943453766538E-5 0.0 0.0 35.10186471569239 0.0 21 9.218943453766538E-5 0.0 0.0 35.96033273010713 0.0 22 9.218943453766538E-5 0.0 0.0 36.86185321045096 0.0 23 9.218943453766538E-5 0.0 0.0 37.76807535195621 0.0 24 9.218943453766538E-5 0.0 0.0 38.48899673004076 0.0 25 9.218943453766538E-5 0.0 0.0 39.10869410900295 0.0 26 9.218943453766538E-5 0.0 0.0 39.674368479326056 0.0 27 9.218943453766538E-5 0.0 0.0 40.25995576750931 0.0 28 9.218943453766538E-5 0.0 0.0 40.77547908544393 0.0 29 9.218943453766538E-5 0.0 0.0 41.34585511692847 0.0 30 9.218943453766538E-5 0.0 0.0 41.977813690684165 0.0 31 1.8437886907533076E-4 0.0 0.0 42.59446881830661 0.0 32 1.8437886907533076E-4 0.0 0.0 43.157469695028134 0.0 33 1.8437886907533076E-4 0.0 0.0 43.670319519361165 0.0 34 1.8437886907533076E-4 0.0 0.0 44.197366516612995 0.0 35 1.8437886907533076E-4 0.0 0.0 44.734738730533046 0.0 36 1.8437886907533076E-4 0.0 0.0 45.27367816484024 0.0 37 1.8437886907533076E-4 0.0 0.0 45.79058432429293 0.0 38 1.8437886907533076E-4 0.0 0.0 46.28259933642045 0.0 39 1.8437886907533076E-4 0.0 0.0 46.77111115003554 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTCG 35 1.2118471E-7 45.000004 29 TAGAACG 35 1.2118471E-7 45.000004 1 TTGTCCG 35 1.2118471E-7 45.000004 24 ACTACGG 35 1.2118471E-7 45.000004 2 ATACGTA 35 1.2118471E-7 45.000004 29 TTCGCAG 90 0.0 45.000004 1 TGCAACC 35 1.2118471E-7 45.000004 30 CTTAACG 20 7.0331106E-4 45.0 11 AAGTACG 25 3.8906604E-5 45.0 1 TCGTTAA 20 7.0331106E-4 45.0 43 CTCGTTA 20 7.0331106E-4 45.0 42 TCACCGC 20 7.0331106E-4 45.0 19 CATATCG 20 7.0331106E-4 45.0 12 GTCGACA 25 3.8906604E-5 45.0 9 CGAGTAT 20 7.0331106E-4 45.0 33 CGTGCTC 25 3.8906604E-5 45.0 11 CAACGCG 20 7.0331106E-4 45.0 1 GCGGTAA 20 7.0331106E-4 45.0 37 GACGTCC 25 3.8906604E-5 45.0 34 CCGTGTA 25 3.8906604E-5 45.0 15 >>END_MODULE