SRR2934727.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934727.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2165240
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC	5367	0.2478709057656426	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5103	0.23567826199405148	No Hit
CCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC	4642	0.21438731965047753	No Hit
CTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGCT	3276	0.1512996249838355	Illumina Single End Adapter 1 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGTTG	30	2.1663946E-6	45.000004	12
TTCGACA	30	2.1663946E-6	45.000004	36
GATACGT	20	7.03467E-4	45.0	15
CGCGAAA	20	7.03467E-4	45.0	23
TACGCCG	25	3.891952E-5	45.0	2
TCGCTAA	20	7.03467E-4	45.0	10
ACGTCTA	55	1.8189894E-12	45.0	32
TATAGCG	95	0.0	42.63158	1
TCTAGCG	50	1.0822987E-9	40.5	1
CGTTTTT	3925	0.0	39.726112	1
TATCACG	80	0.0	39.375	1
CGAACGT	40	3.460118E-7	39.375	36
ATTACGC	40	3.460118E-7	39.375	9
CGAATAT	255	0.0	38.82353	14
TACGGGT	245	0.0	38.57143	4
GCCGATA	140	0.0	38.571426	9
CGTACTC	35	6.2508498E-6	38.571426	43
CGTATCG	30	1.140255E-4	37.500004	18
GTATGCG	120	0.0	37.500004	1
ACGTACT	30	1.140255E-4	37.500004	41