SRR2934726.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934726.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1065927
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	5154	0.48352279283665767	No Hit
CCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	4656	0.43680289550785373	No Hit
CTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGCT	3433	0.3220670833931404	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2875	0.2697182827717095	No Hit
TCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	2200	0.206393120729656	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTG	1734	0.16267530515691975	No Hit
ACTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	1593	0.14944738241924635	No Hit
ACCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTG	1086	0.10188314959654834	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAA	20	7.033055E-4	45.000004	41
GCGCGAA	20	7.033055E-4	45.000004	24
ACCGCGT	20	7.033055E-4	45.000004	42
CGCGAAA	20	7.033055E-4	45.000004	25
CGCTACC	20	7.033055E-4	45.000004	19
TATTCGT	20	7.033055E-4	45.000004	32
AACGCGC	20	7.033055E-4	45.000004	18
ATGCGCG	55	1.8189894E-12	45.000004	1
CGTAAAT	20	7.033055E-4	45.000004	16
GGACCGT	20	7.033055E-4	45.000004	8
AATAGCG	80	0.0	45.000004	1
ACGACTC	20	7.033055E-4	45.000004	13
TGCGCTA	25	3.8906146E-5	45.0	30
TATTCCG	25	3.8906146E-5	45.0	1
GTATCGA	25	3.8906146E-5	45.0	9
GTATCCG	25	3.8906146E-5	45.0	1
CCCGAAT	25	3.8906146E-5	45.0	12
CGAACTA	30	2.1653523E-6	44.999996	12
CACGAAC	30	2.1653523E-6	44.999996	10
GACGATA	30	2.1653523E-6	44.999996	17