##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934725.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 958726 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1053898611282 33.0 31.0 34.0 30.0 34.0 2 32.28704968885792 34.0 31.0 34.0 30.0 34.0 3 32.28563113965826 34.0 31.0 34.0 30.0 34.0 4 35.87264453034548 37.0 35.0 37.0 35.0 37.0 5 35.749204673702394 37.0 35.0 37.0 35.0 37.0 6 35.65847280662045 37.0 35.0 37.0 33.0 37.0 7 35.98858276504444 37.0 35.0 37.0 35.0 37.0 8 35.79493932573019 37.0 35.0 37.0 35.0 37.0 9 37.468168173179826 39.0 37.0 39.0 35.0 39.0 10 37.266598590212425 39.0 37.0 39.0 34.0 39.0 11 37.10195509457343 39.0 37.0 39.0 34.0 39.0 12 36.87012660551607 39.0 35.0 39.0 33.0 39.0 13 36.67575303058434 39.0 35.0 39.0 33.0 39.0 14 37.67187705350642 40.0 36.0 41.0 33.0 41.0 15 37.809155066202436 40.0 36.0 41.0 33.0 41.0 16 37.954710730698864 40.0 36.0 41.0 33.0 41.0 17 37.96539887308783 40.0 36.0 41.0 34.0 41.0 18 37.93934241900188 40.0 36.0 41.0 34.0 41.0 19 37.89795833220336 40.0 36.0 41.0 34.0 41.0 20 37.82058586081946 40.0 35.0 41.0 34.0 41.0 21 37.71745316180014 39.0 35.0 41.0 33.0 41.0 22 37.661747986390274 39.0 35.0 41.0 33.0 41.0 23 37.48857546368827 39.0 35.0 41.0 33.0 41.0 24 37.2073001045137 39.0 35.0 41.0 32.0 41.0 25 37.1306035301014 39.0 35.0 41.0 32.0 41.0 26 37.31169698120214 39.0 35.0 41.0 33.0 41.0 27 37.411210293660545 39.0 35.0 41.0 33.0 41.0 28 37.40514808193373 39.0 35.0 41.0 33.0 41.0 29 37.42074690787566 39.0 35.0 41.0 33.0 41.0 30 37.3010714218661 39.0 35.0 41.0 33.0 41.0 31 37.20660438957533 39.0 35.0 41.0 33.0 41.0 32 37.08348683565482 39.0 35.0 41.0 32.0 41.0 33 36.92573686329567 39.0 35.0 41.0 32.0 41.0 34 36.86402371480486 39.0 35.0 41.0 32.0 41.0 35 36.74436491760941 39.0 35.0 41.0 31.0 41.0 36 36.65253576099949 39.0 35.0 41.0 31.0 41.0 37 36.562155402064825 39.0 35.0 41.0 31.0 41.0 38 36.4383390040533 39.0 35.0 41.0 31.0 41.0 39 36.45955152984273 39.0 35.0 41.0 31.0 41.0 40 36.35263985747753 39.0 35.0 40.0 31.0 41.0 41 36.245888814948174 38.0 35.0 40.0 30.0 41.0 42 36.14111226773864 38.0 35.0 40.0 30.0 41.0 43 36.10241403696155 38.0 35.0 40.0 30.0 41.0 44 36.04829012668896 38.0 35.0 40.0 30.0 41.0 45 36.001669924462256 38.0 35.0 40.0 30.0 41.0 46 35.919412845797446 38.0 35.0 40.0 30.0 41.0 47 35.77639492409719 38.0 35.0 40.0 30.0 41.0 48 35.751552581238016 38.0 35.0 40.0 30.0 41.0 49 35.72055728122529 38.0 35.0 40.0 29.0 41.0 50 35.594644350940726 38.0 35.0 40.0 29.0 41.0 51 34.60555674926934 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 10.0 10 18.0 11 17.0 12 11.0 13 9.0 14 26.0 15 43.0 16 70.0 17 138.0 18 286.0 19 445.0 20 873.0 21 1301.0 22 2126.0 23 3188.0 24 4379.0 25 6158.0 26 8047.0 27 9896.0 28 11099.0 29 12867.0 30 15427.0 31 19673.0 32 25679.0 33 36938.0 34 71794.0 35 98173.0 36 74082.0 37 112330.0 38 195769.0 39 247730.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.830671119798566 21.21784534893181 25.499777830162113 13.45170570110751 2 31.971074112937377 24.199301990349692 26.081800222378448 17.74782367433448 3 29.822493600882837 25.219614363227866 28.197003106205525 16.760888929683766 4 27.934049978826064 25.7012952605854 27.550520169474908 18.814134591113625 5 25.145036225157135 29.131993916927257 25.858483028519096 19.864486829396512 6 26.428197420326562 32.836597734910704 25.471302541080558 15.263902303682178 7 76.73141231175539 6.33580397318942 10.990105619332322 5.942678095722866 8 76.34329307852296 5.437632858606109 10.853048733423314 7.366025329447622 9 70.80083360626497 7.0833585403963175 13.732182083306387 8.383625770032314 10 43.49386581776232 22.96359961031619 19.227182740428443 14.315351831493045 11 33.04343472483275 22.831653673729512 24.556546917471728 19.568364683966013 12 29.961219368203217 20.317066607143232 30.129985000928315 19.591729023725236 13 23.88711686133473 25.487365524665023 30.836964888821207 19.78855272517904 14 17.299520405204408 30.503397216723027 29.487361352461495 22.70972102561107 15 15.785427744736245 25.016740966657835 39.362549883908436 19.835281404697483 16 17.580309702667915 24.724895329843978 35.61319918308255 22.081595784405554 17 18.5081034623031 24.016350865627928 29.671981358594635 27.80356431347434 18 20.512847257714924 24.653342039331363 31.518285725014238 23.315524977939475 19 22.886309539951977 26.61688532489992 27.665255766506803 22.8315493686413 20 25.629324749719938 26.44645081076345 27.50587759172068 20.418346847795927 21 22.346635013549232 27.33669473864274 28.77985993912755 21.53681030868048 22 19.776349029858377 25.654670886155166 26.02401520350966 28.544964880476797 23 20.035651479150456 27.596414408287668 27.587235560525116 24.780698552036764 24 22.07168680102553 23.384887861599665 29.949954418676448 24.593470918698358 25 19.48930142710222 25.94119696347027 28.620377459253216 25.949124150174296 26 18.50591305545067 27.443085928617773 28.46266816587847 25.588332850053092 27 21.254039214540967 27.404388740891555 27.035565948978125 24.306006095589357 28 17.443774342199962 25.591253392522994 30.110897169785737 26.854075095491307 29 18.48035830883902 22.729434687282914 30.746636682430644 28.04357032144742 30 20.726672688547094 23.923415032032093 28.622046340664593 26.727865938756224 31 22.76239509515753 25.21627660040512 23.49054891595722 28.530779388480127 32 22.48369189945824 24.703825702025394 26.64588213942253 26.16660025909384 33 21.630580582982 24.719888685609863 27.846433704728984 25.803097026679154 34 21.263009452127093 22.018282595861592 29.223260869111716 27.4954470828996 35 19.08824836293164 21.740831061220828 30.57390745635354 28.597013119493997 36 21.531282139005306 24.590654681316664 27.82661573796893 26.0514474417091 37 21.8524375056064 24.56071912100016 29.872142822871183 23.714700550522256 38 19.116202126572137 26.598110409021974 29.70963549543874 24.57605196896715 39 21.824900962318743 24.236643211929167 30.268919378425117 23.669536447326976 40 24.139430869716687 21.189161449673836 31.575653523530185 23.09575415707929 41 19.597987329017887 23.804194316207134 27.907765096596943 28.69005325817804 42 20.810951199821428 23.537486205652083 28.77224566768816 26.879316926838325 43 22.11716381948544 23.39417101445043 28.381414502162244 26.107250663901887 44 20.58471346349218 23.70979821137635 27.823486585322605 27.88200173980887 45 21.033851173327935 21.707870653346212 28.1629996474488 29.09527852587705 46 22.77094811239082 23.210281143934765 29.293562498565805 24.72520824510861 47 19.203192570139958 21.56132200441002 32.744704952196976 26.490780473253047 48 19.76570991086087 20.612771532220886 31.23009076628776 28.39142779063048 49 20.428255831175957 20.397590135241977 33.0516748268014 26.122479206780664 50 19.35099288013468 20.969599238990078 31.852687837818106 27.82672004305714 51 18.13500416177302 21.68325465252846 27.777488041421638 32.404253144276886 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 316.0 1 660.5 2 1005.0 3 3483.0 4 5961.0 5 4167.5 6 2374.0 7 2368.5 8 2363.0 9 2426.0 10 2489.0 11 2506.5 12 2524.0 13 2527.5 14 2531.0 15 2625.5 16 2720.0 17 2482.5 18 2245.0 19 2426.5 20 2608.0 21 2577.0 22 2546.0 23 2665.0 24 2784.0 25 3375.5 26 5436.5 27 6906.0 28 7376.0 29 7846.0 30 9244.5 31 10643.0 32 11855.0 33 13067.0 34 15145.0 35 17223.0 36 18728.5 37 20234.0 38 22409.0 39 24584.0 40 29192.0 41 33800.0 42 41976.5 43 50153.0 44 60583.0 45 71013.0 46 85265.0 47 99517.0 48 108858.0 49 118199.0 50 113654.5 51 109110.0 52 93234.0 53 77358.0 54 67455.0 55 57552.0 56 50862.5 57 44173.0 58 40850.5 59 37528.0 60 36946.5 61 36365.0 62 33358.0 63 30351.0 64 24633.5 65 18916.0 66 15322.5 67 11729.0 68 10172.5 69 8616.0 70 7476.5 71 6337.0 72 5427.5 73 4518.0 74 3799.5 75 2639.0 76 2197.0 77 1385.0 78 573.0 79 445.5 80 318.0 81 282.5 82 247.0 83 160.0 84 73.0 85 43.5 86 14.0 87 29.0 88 44.0 89 24.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 958726.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.083468407468033 #Duplication Level Percentage of deduplicated Percentage of total 1 68.16212993269893 16.41580502819886 2 12.139226976873251 5.847093787772213 3 5.600159711320778 4.046138084531077 4 3.1370620921915795 3.022053431582459 5 1.9654590691892622 2.366753569949556 6 1.299816164608153 1.8782448921514032 7 0.969160742873608 1.633852649292835 8 0.7288762725086524 1.404309494553215 9 0.5448829789355883 1.1810404808066082 >10 3.6002267351599735 18.442574200894647 >50 1.3365036426442731 23.713529946788178 >100 0.5073115918334075 16.41274892123982 >500 0.005248050950000767 0.9477238672980204 >1k 0.003061363054167114 1.5185911001003396 >5k 8.746751583334611E-4 1.1695405448407665 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 5947 0.6203023595897055 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 5157 0.5379013399031631 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3449 0.3597482492390944 No Hit CTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGCT 3426 0.35734923221024567 Illumina Paired End PCR Primer 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 2296 0.2394844825320269 TruSeq Adapter, Index 14 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 1584 0.16521925972592796 No Hit CGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTG 1548 0.16146427655033868 No Hit GCCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTG 1113 0.11609156317863498 No Hit AGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTG 1002 0.10451369838723472 No Hit GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC 982 0.10242759662301847 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3805049617930462 0.0 2 0.0 0.0 0.0 2.050846644401007 0.0 3 0.0 0.0 0.0 2.9286782667832103 0.0 4 0.0 0.0 0.0 3.88692911217595 0.0 5 1.043050882108131E-4 0.0 0.0 6.428322586432412 0.0 6 1.043050882108131E-4 0.0 0.0 7.750806799857311 0.0 7 1.043050882108131E-4 0.0 0.0 9.313609936519923 0.0 8 1.043050882108131E-4 0.0 0.0 11.822668833431033 0.0 9 1.043050882108131E-4 0.0 0.0 12.76005866118161 0.0 10 1.043050882108131E-4 0.0 0.0 14.6226346213621 0.0 11 1.043050882108131E-4 0.0 0.0 17.031352023414406 0.0 12 1.043050882108131E-4 0.0 0.0 19.03828622567866 0.0 13 1.043050882108131E-4 0.0 0.0 19.785632182709136 0.0 14 1.043050882108131E-4 0.0 0.0 20.065065514025907 0.0 15 1.043050882108131E-4 0.0 0.0 20.59712576898926 0.0 16 1.043050882108131E-4 0.0 0.0 21.7029683142003 0.0 17 1.043050882108131E-4 0.0 0.0 23.02148893427319 0.0 18 1.043050882108131E-4 0.0 0.0 24.720514516139126 0.0 19 1.043050882108131E-4 0.0 0.0 25.53044352609609 0.0 20 1.043050882108131E-4 0.0 0.0 26.275077550833085 0.0 21 1.043050882108131E-4 0.0 0.0 27.15968900394899 0.0 22 1.043050882108131E-4 0.0 0.0 28.07027242402939 0.0 23 1.043050882108131E-4 0.0 0.0 28.984715132373587 0.0 24 1.043050882108131E-4 0.0 0.0 29.732999835197962 0.0 25 1.043050882108131E-4 0.0 0.0 30.34318460123122 0.0 26 1.043050882108131E-4 0.0 0.0 30.900173772276958 0.0 27 1.043050882108131E-4 0.0 0.0 31.437344976562645 0.0 28 1.043050882108131E-4 0.0 0.0 31.96252109570409 0.0 29 1.043050882108131E-4 0.0 0.0 32.525142741513214 0.0 30 1.043050882108131E-4 0.0 0.0 33.16025642362886 0.0 31 3.129152646324393E-4 0.0 0.0 33.751457663607745 0.0 32 3.129152646324393E-4 0.0 0.0 34.301771309008 0.0 33 3.129152646324393E-4 0.0 0.0 34.83383156397135 0.0 34 3.129152646324393E-4 0.0 0.0 35.34513510638076 0.0 35 3.129152646324393E-4 0.0 0.0 35.94927017729779 0.0 36 5.215254410540655E-4 0.0 0.0 36.47382046590997 0.0 37 5.215254410540655E-4 0.0 0.0 37.03487753539593 0.0 38 6.258305292648786E-4 0.0 0.0 37.553378128891886 0.0 39 6.258305292648786E-4 0.0 0.0 38.13529621602001 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTCGA 30 2.165123E-6 45.000004 26 CTATGCA 20 7.0326997E-4 45.000004 11 TCGTTGA 20 7.0326997E-4 45.000004 25 ACACGAT 20 7.0326997E-4 45.000004 12 CCCTCCG 20 7.0326997E-4 45.000004 20 TCCGATA 20 7.0326997E-4 45.000004 11 CCGGCAT 40 6.8139343E-9 45.000004 15 CGTGACC 20 7.0326997E-4 45.000004 33 TAGAACG 30 2.165123E-6 45.000004 1 TCGGGTC 20 7.0326997E-4 45.000004 5 CCGTGAT 20 7.0326997E-4 45.000004 26 CCGTGAC 20 7.0326997E-4 45.000004 32 ATTAACG 20 7.0326997E-4 45.000004 1 TTATCGG 20 7.0326997E-4 45.000004 26 GCGTTAC 20 7.0326997E-4 45.000004 36 CCCACTA 20 7.0326997E-4 45.000004 14 CGTTATA 30 2.165123E-6 45.000004 14 CGTTAGC 30 2.165123E-6 45.000004 38 CGTTAGA 20 7.0326997E-4 45.000004 14 ACCTAGT 20 7.0326997E-4 45.000004 28 >>END_MODULE