SRR2934722.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934722.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2580581
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7029	0.2723805220607297	No Hit
GCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC	6862	0.2659091111652764	TruSeq Adapter, Index 13 (95% over 22bp)
GAATCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTC	5058	0.1960023731090014	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGC	4883	0.18922095450598142	No Hit
CCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC	4390	0.17011672952718787	TruSeq Adapter, Index 13 (95% over 22bp)
GAATGATACCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCG	4383	0.16984547278306705	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	4256	0.16492410042544683	No Hit
CTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGCT	3279	0.1270644091388722	Illumina Single End Adapter 2 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGTCG	60	0.0	45.000004	1
CGTAAAC	20	7.0349226E-4	45.0	38
ACGGGTA	290	0.0	41.12069	5
CGTTTTT	3730	0.0	41.07909	1
GCGTTAG	150	0.0	40.5	1
TATCGAG	45	1.9299478E-8	40.000004	1
TACGAAT	240	0.0	39.375004	12
CGAATAT	255	0.0	37.941177	14
AGGTACG	95	0.0	37.894737	1
TTACGGG	800	0.0	37.6875	3
TTTACGC	30	1.1403159E-4	37.500004	17
ACGTTAA	30	1.1403159E-4	37.500004	21
TCGACAC	30	1.1403159E-4	37.500004	28
CTACGAA	260	0.0	37.211536	11
ACCGCTA	25	0.002107594	36.0	21
CGTTAGG	340	0.0	35.735294	2
GCGTAAG	140	0.0	35.357143	1
CGTATGG	325	0.0	35.307693	2
TACGGGA	690	0.0	35.217392	4
ACGATAA	45	8.7055014E-7	35.000004	30